Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb304630 Zea mays HOM05D007068 ORTHO05D008590 5.7e-214 747.3 368 100.0
VMungo0251G0101 Vigna mungo HOM05D007068 ORTHO05D008590 7.8e-30 135.6 344 32.0
Prupe.5G233500 Prunus persica HOM05D007068 ORTHO05D008590 1.3e-27 128.3 268 34.0
Dinv17551 Davidia involucrata HOM05D007068 ORTHO05D008590 1.6e-27 127.9 218 37.2
HPP92_002012 Vanilla planifolia HOM05D007068 ORTHO05D008590 2.1e-27 127.5 170 41.2
Lj4g0019727 Lotus japonicus HOM05D007068 ORTHO05D008590 6.2e-27 125.9 221 37.1
FvH4_5g17330 Fragaria vesca HOM05D007068 ORTHO05D008590 1.1e-26 125.2 330 30.6
FAN18G2889 Fragaria x ananassa HOM05D007068 ORTHO05D008590 1.1e-26 125.2 330 30.6
MBI13_g47078_MAGBIO Magnolia biondii HOM05D007068 ORTHO05D008590 1.1e-26 125.2 255 32.9
Ca_17189_v3 Cicer arietinum L. HOM05D007068 ORTHO05D008590 3.1e-26 123.6 235 35.3
Phvul.002G330100 Phaseolus vulgaris HOM05D007068 ORTHO05D008590 3.1e-26 123.6 298 32.6
CSS0009831 Camellia sinensis var. sinensis HOM05D007068 ORTHO05D008590 4.0e-26 123.2 418 29.7
TAR622G0435 Trochodendron aralioides HOM05D007068 ORTHO05D008590 4.0e-26 123.2 188 40.4
arahy.Tifrunner.gnm1.ann1.N01HH5 Arachis hypogaea HOM05D007068 ORTHO05D008590 5.3e-26 122.9 263 32.7
Eucgr.K02273 Eucalyptus grandis HOM05D007068 ORTHO05D008590 6.9e-26 122.5 301 29.9
Cfa019656 Carpinus fangiana HOM05D007068 ORTHO05D008590 1.2e-25 121.7 257 34.2
CiPaw.16G093400 Carya illinoinensis HOM05D007068 ORTHO05D008590 1.5e-25 121.3 285 32.3
Lalb_Chr16g0386991 Lupinus albus HOM05D007068 ORTHO05D008590 1.5e-25 121.3 242 35.5
CANSAT80G0386 Cannabis sativa HOM05D007068 ORTHO05D008590 5.8e-25 119.4 402 31.1
Haze_18849 Corylus avellana HOM05D007068 ORTHO05D008590 7.6e-25 119.0 247 34.0
Psat7g003560 Pisum sativum HOM05D007068 ORTHO05D008590 9.9e-25 118.6 396 27.0
Thecc.03G056900 Theobroma cacao HOM05D007068 ORTHO05D008590 9.9e-25 118.6 427 28.8
FAN13G0457 Fragaria x ananassa HOM05D007068 ORTHO05D008590 1.3e-24 118.2 330 30.0
FAN04G2769 Fragaria x ananassa HOM05D007068 ORTHO05D008590 2.2e-24 117.5 327 30.0
PGSC0003DMG400005672 Solanum tuberosum HOM05D007068 ORTHO05D008590 2.9e-24 117.1 264 36.7
Aqoxy3G00060 Aquilegia oxysepala HOM05D007068 ORTHO05D008590 4.9e-24 116.3 275 33.5
Oeu031766.1 Olea europaea HOM05D007068 ORTHO05D008590 4.9e-24 116.3 423 27.2
SalBow1G5613 Salvia bowleyana HOM05D007068 ORTHO05D008590 6.4e-24 115.9 388 30.7
Duzib084G0836 Durio zibethinus HOM05D007068 ORTHO05D008590 1.4e-23 114.8 411 27.7
Glyma.08G054400 Glycine max HOM05D007068 ORTHO05D008590 2.4e-23 114.0 219 33.8
RcHm_v2.0_Chr7g0178441 Rosa chinensis HOM05D007068 ORTHO05D008590 2.4e-23 114.0 258 34.1
Solyc03g118700.3 Solanum lycopersicum HOM05D007068 ORTHO05D008590 3.2e-23 113.6 229 35.8
Nn3g18277 Nelumbo nucifera HOM05D007068 ORTHO05D008590 5.4e-23 112.8 325 29.8
GSVIVG01011540001 Vitis vinifera HOM05D007068 ORTHO05D008590 1.2e-22 111.7 212 36.3
CAN.G843.56 Capsicum annuum HOM05D007068 ORTHO05D008590 1.6e-22 111.3 260 34.6
Hma1.2p1_0669F.1_g200120 Hydrangea macrophylla HOM05D007068 ORTHO05D008590 1.6e-22 111.3 208 37.0
TPR.G1401 Trifolium pratense HOM05D007068 ORTHO05D008590 2.1e-22 110.9 383 27.7
ATR0618G302 Amborella trichopoda HOM05D007068 ORTHO05D008590 4.6e-22 109.8 287 30.0
SGA_v2.0_scaffold36G14383 Striga asiatica HOM05D007068 ORTHO05D008590 4.6e-22 109.8 409 29.1
Medtr8g107330 Medicago truncatula HOM05D007068 ORTHO05D008590 1.0e-21 108.6 250 30.8
COL.COLO4_04377 Corchorus olitorius HOM05D007068 ORTHO05D008590 1.3e-21 108.2 232 33.2
QL10p029594 Quercus lobata HOM05D007068 ORTHO05D008590 1.8e-21 107.8 250 29.2
Migut.D01541 Erythranthe guttata HOM05D007068 ORTHO05D008590 2.3e-21 107.5 407 27.0
Peaxi162Scf00683g00453 Petunia axillaris HOM05D007068 ORTHO05D008590 3.0e-21 107.1 221 38.5
arahy.Tifrunner.gnm1.ann1.ZH8P6D Arachis hypogaea HOM05D007068 ORTHO05D008590 3.9e-21 106.7 299 29.1
Nitab4.5_0003401g0040 Nicotiana tabacum HOM05D007068 ORTHO05D008590 3.9e-21 106.7 413 28.6
Rhsim08G0124500 Rhododendron simsii HOM05D007068 ORTHO05D008590 3.9e-21 106.7 249 34.1
PSO017G3869 Papaver somniferum HOM05D007068 ORTHO05D008590 8.7e-21 105.5 308 30.5
Atru.chr9.1734 Acer truncatum HOM05D007068 ORTHO05D008590 1.1e-20 105.1 345 28.7
Actinidia39838 Actinidia chinensis HOM05D007068 ORTHO05D008590 4.3e-20 103.2 242 34.3
PSO478G2297 Papaver somniferum HOM05D007068 ORTHO05D008590 4.3e-20 103.2 244 33.6
DCAR_014504 Daucus carota HOM05D007068 ORTHO05D008590 5.6e-20 102.8 413 25.9
Potri.012G047000 Populus trichocarpa HOM05D007068 ORTHO05D008590 9.6e-20 102.1 438 26.9
Sed0003101 Sechium edule HOM05D007068 ORTHO05D008590 2.1e-19 100.9 135 40.7
Gohir.A07G061700 Gossypium hirsutum HOM05D007068 ORTHO05D008590 8.1e-19 99.0 227 31.7
MELO3C017359.2 Cucumis melo HOM05D007068 ORTHO05D008590 1.1e-18 98.6 314 29.0
ECA238G2622 Erigeron canadensis HOM05D007068 ORTHO05D008590 1.4e-18 98.2 327 25.4
Nitab4.5_0004556g0050 Nicotiana tabacum HOM05D007068 ORTHO05D008590 1.4e-18 98.2 284 31.0
Peaxi162Scf00683g00454 Petunia axillaris HOM05D007068 ORTHO05D008590 1.8e-18 97.8 403 26.6
Sabra12G0033000 Salix brachista HOM05D007068 ORTHO05D008590 2.4e-18 97.4 257 33.1
BcaB07g33743 Brassica carinata HOM05D007068 ORTHO05D008590 4.0e-18 96.7 248 31.0
Gorai.001G070000 Gossypium raimondii HOM05D007068 ORTHO05D008590 4.0e-18 96.7 238 31.1
MD06G1227000 Malus domestica HOM05D007068 ORTHO05D008590 5.3e-18 96.3 236 33.5
SMO164G0186 Selaginella moellendorffii HOM05D007068 ORTHO05D008590 5.3e-18 96.3 230 32.6
Aa31LG10G5220 Aethionema arabicum HOM05D007068 ORTHO05D008590 6.9e-18 95.9 382 28.0
Mapoly0060s0110 Marchantia polymorpha HOM05D007068 ORTHO05D008590 9.0e-18 95.5 171 33.3
Thhalv10011472m.g Eutrema salsugineum HOM05D007068 ORTHO05D008590 1.5e-17 94.7 304 28.9
Carub.0001s3769 Capsella rubella HOM05D007068 ORTHO05D008590 2.0e-17 94.4 256 30.9
CsaV3_1G004370 Cucumis sativus L. HOM05D007068 ORTHO05D008590 2.0e-17 94.4 146 37.0
Hund10357 Selenicereus undatus HOM05D007068 ORTHO05D008590 2.6e-17 94.0 209 33.0
CDE02G3810 Ceratophyllum demersum HOM05D007068 ORTHO05D008590 4.5e-17 93.2 142 37.3
Gohir.D07G066400 Gossypium hirsutum HOM05D007068 ORTHO05D008590 1.3e-16 91.7 236 31.4
A06p04350 Brassica napus HOM05D007068 ORTHO05D008590 2.2e-16 90.9 221 31.7
AL1G55220 Arabidopsis lyrata HOM05D007068 ORTHO05D008590 2.9e-16 90.5 266 30.5
Ciclev10008793m.g Citrus clementina HOM05D007068 ORTHO05D008590 2.9e-16 90.5 112 39.3
AT1G48580 Arabidopsis thaliana HOM05D007068 ORTHO05D008590 1.1e-15 88.6 202 32.7
AUR62037972 Chenopodium quinoa HOM05D007068 ORTHO05D008590 2.5e-15 87.4 132 37.1
BcaC08g43059 Brassica carinata HOM05D007068 ORTHO05D008590 5.5e-15 86.3 209 32.5
C06p03180 Brassica napus HOM05D007068 ORTHO05D008590 5.5e-15 86.3 211 32.2
BolC6t35436H Brassica oleracea HOM05D007068 ORTHO05D008590 5.5e-15 86.3 209 32.5
EL10Ac4g08480 Beta vulgaris HOM05D007068 ORTHO05D008590 9.3e-15 85.5 185 34.1
SMO164G0105 Selaginella moellendorffii HOM05D020476 ORTHO05D008590 1.2e-14 85.1 216 31.9
CARHR038180 Cardamine hirsuta HOM05D007068 ORTHO05D008590 2.1e-14 84.3 365 25.5
SEGI_36605 Sequoiadendron giganteum HOM05D007068 ORTHO05D008590 2.1e-14 84.3 116 37.9
Manes.14G171300 Manihot esculenta HOM05D007068 ORTHO05D008590 2.7e-14 84.0 254 28.3
Cpa.g.sc3.397 Carica papaya HOM05D007068 ORTHO05D008590 3.5e-14 83.6 89 43.8
Sp1g35530 Schrenkiella parvula HOM05D007068 ORTHO05D008590 3.5e-14 83.6 202 31.7
Hma1.2p1_0669F.1_g200130 Hydrangea macrophylla HOM05D007068 ORTHO05D008590 1.0e-13 82.0 365 27.1
Lsat_1_v5_gn_2_14700 Lactuca sativa HOM05D007068 ORTHO05D008590 1.3e-13 81.6 240 29.6
VMungo0251G0567 Vigna mungo HOM05D007068 ORTHO05D008590 2.3e-13 80.9 170 28.8
BraA06t23639Z Brassica rapa HOM05D007068 ORTHO05D008590 5.1e-13 79.7 120 40.0
Ah.06g187490 Amaranthus hybridus HOM05D007068 ORTHO05D008590 6.7e-13 79.3 194 32.5
ClCG06G014310 Citrullus lanatus HOM05D007068 ORTHO05D008590 1.5e-12 78.2 302 26.5
Cc04_g06260 Coffea canephora HOM05D007068 ORTHO05D008590 1.5e-12 78.2 249 28.1
HanXRQChr14g0431751 Helianthus annuus HOM05D007068 ORTHO05D008590 4.8e-11 73.2 78 42.3
Sc10g0009180 Simmondsia chinensis HOM05D007068 ORTHO05D008590 1.5e-09 68.2 260 28.5
Pp3c3_22100 Physcomitrium patens HOM05D007068 ORTHO05D008590 8.4e-08 62.4 133 31.6
Pp3c3_22103 Physcomitrium patens HOM05D007068 ORTHO05D008590 8.4e-08 62.4 133 31.6
vmacro17572 Vaccinium macrocarpon HOM05D007068 ORTHO05D008590 1.1e-07 62.0 59 47.5
FAN08G2700 Fragaria x ananassa HOM05D007068 ORTHO05D008590 4.2e-07 60.1 86 43.0
CBR_g21755 Chara braunii HOM05D007068 ORTHO05D008590 5.5e-07 59.7 126 34.1
Cre03.g201700 Chlamydomonas reinhardtii HOM05D007068 ORTHO05D008590 2.7e-06 57.4 153 30.7
arahy.Tifrunner.gnm1.ann1.USF1F6 Arachis hypogaea HOM05D007068 ORTHO05D008590 7.9e-06 55.8 56 46.4


User provided reference genes

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