Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb304600 Zea mays HOM05D006133 ORTHO05D007855 2.2e-129 465.7 249 100.0
Os07g0256300 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 7.2e-35 151.8 132 62.9
Os03g0837800 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 2.8e-31 139.8 149 53.7
Zm00001eb063880 Zea mays HOM05D006133 ORTHO05D007855 2.2e-28 130.2 149 49.0
PSO478G5317 Papaver somniferum HOM05D006133 ORTHO05D007855 1.9e-27 127.1 141 47.5
PSO478G1675 Papaver somniferum HOM05D006133 ORTHO05D007855 7.2e-27 125.2 141 46.8
TAR628G0719 Trochodendron aralioides HOM05D006133 ORTHO05D007855 7.2e-27 125.2 148 45.9
MBI09_g12165_MAGBIO Magnolia biondii HOM05D006133 ORTHO05D007855 7.9e-26 121.7 141 46.1
MELO3C002599.2 Cucumis melo HOM05D006133 ORTHO05D007855 5.1e-25 119.0 153 41.8
CsaV3_1G012270 Cucumis sativus L. HOM05D006133 ORTHO05D007855 5.1e-25 119.0 153 41.8
ECA234G2723 Erigeron canadensis HOM05D006133 ORTHO05D007855 8.8e-25 118.2 148 41.2
ClCG03G006010 Citrullus lanatus HOM05D006133 ORTHO05D007855 1.5e-24 117.5 153 41.2
CDE04G1633 Ceratophyllum demersum HOM05D006133 ORTHO05D007855 2.6e-24 116.7 136 47.8
Duzib235G0895 Durio zibethinus HOM05D006133 ORTHO05D007855 1.3e-23 114.4 148 40.5
Thecc.06G188500 Theobroma cacao HOM05D006133 ORTHO05D007855 1.7e-23 114.0 149 40.3
Zm00001eb131680 Zea mays HOM05D006133 ORTHO05D446205 1.7e-23 114.0 62 93.5
Zm00001eb225310 Zea mays HOM05D000901 ORTHO05D005921 1.7e-23 114.0 62 93.5
Cc02_g13300 Coffea canephora HOM05D006133 ORTHO05D007855 2.8e-23 113.2 153 40.5
Atru.chr10.1894 Acer truncatum HOM05D006133 ORTHO05D007855 6.3e-23 112.1 153 38.6
ATR0584G083 Amborella trichopoda HOM05D006133 ORTHO05D007855 6.3e-23 112.1 136 44.9
QL05p040164 Quercus lobata HOM05D006133 ORTHO05D007855 6.3e-23 112.1 153 39.2
Cc01_g03530 Coffea canephora HOM05D006133 ORTHO05D007855 1.1e-22 111.3 153 39.2
COL.COLO4_31481 Corchorus olitorius HOM05D006133 ORTHO05D007855 1.1e-22 111.3 144 42.4
Gohir.A10G025600 Gossypium hirsutum HOM05D006133 ORTHO05D007855 1.4e-22 110.9 149 38.9
Gorai.011G027600 Gossypium raimondii HOM05D006133 ORTHO05D007855 1.8e-22 110.5 149 38.3
Hma1.2p1_0785F.1_g217580 Hydrangea macrophylla HOM05D006133 ORTHO05D007855 2.4e-22 110.2 148 39.9
Haze_06477 Corylus avellana HOM05D006133 ORTHO05D007855 3.1e-22 109.8 153 37.3
Manes.16G026900 Manihot esculenta HOM05D006133 ORTHO05D007855 3.1e-22 109.8 153 37.9
Lj4g0021405 Lotus japonicus HOM05D006133 ORTHO05D007855 5.3e-22 109.0 153 40.5
AUR62017011 Chenopodium quinoa HOM05D006133 ORTHO05D007855 1.2e-21 107.8 148 39.2
arahy.Tifrunner.gnm1.ann1.YAJ938 Arachis hypogaea HOM05D006133 ORTHO05D007855 1.5e-21 107.5 142 42.3
Potri.004G042800 Populus trichocarpa HOM05D006133 ORTHO05D007855 2.0e-21 107.1 153 37.9
Migut.M01145 Erythranthe guttata HOM05D006133 ORTHO05D007855 4.5e-21 105.9 153 38.6
CiPaw.09G059200 Carya illinoinensis HOM05D006133 ORTHO05D007855 5.9e-21 105.5 153 37.9
Lj1A1206T67 Lonicera japonica HOM05D006133 ORTHO05D007855 7.7e-21 105.1 148 39.2
VMungo0251G0712 Vigna mungo HOM05D006133 ORTHO05D007855 7.7e-21 105.1 141 41.1
Cpa.g.sc27.45 Carica papaya HOM05D006133 ORTHO05D007855 1.0e-20 104.8 149 38.3
Cfa000437 Carpinus fangiana HOM05D006133 ORTHO05D007855 1.0e-20 104.8 153 36.6
AUR62014816 Chenopodium quinoa HOM05D006133 ORTHO05D007855 1.0e-20 104.8 148 38.5
Nn1g08778 Nelumbo nucifera HOM05D006133 ORTHO05D007855 1.7e-20 104.0 153 39.9
Hund23730 Selenicereus undatus HOM05D006133 ORTHO05D007855 1.7e-20 104.0 148 38.5
Hund23731 Selenicereus undatus HOM05D006133 ORTHO05D007855 1.7e-20 104.0 148 38.5
Dinv40551 Davidia involucrata HOM05D006133 ORTHO05D007855 2.2e-20 103.6 153 37.9
Ca_18541_v3 Cicer arietinum L. HOM05D006133 ORTHO05D007855 3.8e-20 102.8 153 39.2
EL10Ac8g20377 Beta vulgaris HOM05D006133 ORTHO05D007855 5.0e-20 102.4 154 37.0
CSS0047692 Camellia sinensis var. sinensis HOM05D006133 ORTHO05D007855 8.5e-20 101.7 153 37.9
Ciclev10017918m.g Citrus clementina HOM05D006133 ORTHO05D007855 8.5e-20 101.7 141 39.0
Glyma.07G196100 Glycine max HOM05D006133 ORTHO05D007855 1.1e-19 101.3 153 37.9
Medtr4g088855 Medicago truncatula HOM05D006133 ORTHO05D007855 1.1e-19 101.3 153 38.6
THA.LOC104814218 Tarenaya hassleriana HOM05D006133 ORTHO05D007855 1.1e-19 101.3 147 36.7
Actinidia05630 Actinidia chinensis HOM05D006133 ORTHO05D007855 1.4e-19 100.9 153 37.3
TPR.G12027 Trifolium pratense HOM05D006133 ORTHO05D007855 1.9e-19 100.5 153 37.9
Phvul.002G234200 Phaseolus vulgaris HOM05D006133 ORTHO05D007855 2.5e-19 100.1 137 40.1
Sc05g0007700 Simmondsia chinensis HOM05D006133 ORTHO05D007855 3.2e-19 99.8 141 38.3
unitig_22.g6229 Utricularia gibba HOM05D006133 ORTHO05D007855 3.2e-19 99.8 149 37.6
Glyma.13G179800 Glycine max HOM05D006133 ORTHO05D007855 5.5e-19 99.0 153 36.6
Oeu057904.1 Olea europaea HOM05D006133 ORTHO05D007855 7.2e-19 98.6 130 41.5
arahy.Tifrunner.gnm1.ann1.Y5A5WX Arachis hypogaea HOM05D006133 ORTHO05D007855 1.2e-18 97.8 153 37.3
Lsat_1_v5_gn_4_52940 Lactuca sativa HOM05D006133 ORTHO05D007855 1.6e-18 97.4 148 38.5
FAN21G1061 Fragaria x ananassa HOM05D006133 ORTHO05D007855 2.7e-18 96.7 136 37.5
Peaxi162Scf00736g00427 Petunia axillaris HOM05D006133 ORTHO05D007855 4.7e-18 95.9 159 35.2
Ah.09g237330 Amaranthus hybridus HOM05D006133 ORTHO05D007855 6.1e-18 95.5 141 37.6
FvH4_3g09320 Fragaria vesca HOM05D006133 ORTHO05D007855 6.1e-18 95.5 148 34.5
HanXRQChr16g0517711 Helianthus annuus HOM05D006133 ORTHO05D007855 8.0e-18 95.1 148 37.8
FAN11G1298 Fragaria x ananassa HOM05D006133 ORTHO05D007855 1.0e-17 94.7 142 35.9
RcHm_v2.0_Chr5g0008281 Rosa chinensis HOM05D006133 ORTHO05D007855 2.3e-17 93.6 148 33.8
FAN25G2154 Fragaria x ananassa HOM05D006133 ORTHO05D007855 3.0e-17 93.2 136 36.8
Prupe.4G046300 Prunus persica HOM05D006133 ORTHO05D007855 6.7e-17 92.0 153 32.7
FAN16G1924 Fragaria x ananassa HOM05D006133 ORTHO05D007855 8.8e-17 91.7 152 32.9
AagrBONN_evm.TU.Sc2ySwM_228.202 Anthoceros agrestis HOM05D006133 ORTHO05D007855 3.3e-16 89.7 136 38.2
CSS0042278 Camellia sinensis var. sinensis HOM05D006133 ORTHO05D007855 7.4e-16 88.6 148 35.8
CAN.G1164.26 Capsicum annuum HOM05D006133 ORTHO05D007855 7.4e-16 88.6 148 37.8
Carub.0004s1546 Capsella rubella HOM05D006133 ORTHO05D007855 9.7e-16 88.2 145 35.2
Nitab4.5_0007940g0050 Nicotiana tabacum HOM05D006133 ORTHO05D007855 9.7e-16 88.2 148 35.1
Sopen02g023140 Solanum pennellii HOM05D006133 ORTHO05D007855 1.3e-15 87.8 148 36.5
SMO353G0258 Selaginella moellendorffii HOM05D006133 ORTHO05D007855 1.7e-15 87.4 130 36.2
CARHR127900 Cardamine hirsuta HOM05D006133 ORTHO05D007855 2.2e-15 87.0 149 33.6
BolC4t27810H Brassica oleracea HOM05D006133 ORTHO05D007855 2.8e-15 86.7 149 34.2
TWI38G1277 Tripterygium wilfordii HOM05D006133 ORTHO05D007855 3.7e-15 86.3 153 32.7
BcaC02g07769 Brassica carinata HOM05D006133 ORTHO05D007855 4.8e-15 85.9 149 33.6
Solyc02g078280.3 Solanum lycopersicum HOM05D006133 ORTHO05D007855 4.8e-15 85.9 148 35.8
Thhalv10017234m.g Eutrema salsugineum HOM05D006133 ORTHO05D007855 6.3e-15 85.5 127 40.2
Nitab4.5_0003432g0010 Nicotiana tabacum HOM05D006133 ORTHO05D007855 1.1e-14 84.7 148 34.5
Potri.011G051900 Populus trichocarpa HOM05D006133 ORTHO05D007855 1.1e-14 84.7 153 34.0
PGSC0003DMG400029689 Solanum tuberosum HOM05D006133 ORTHO05D007855 2.4e-14 83.6 148 35.1
AT2G33793 Arabidopsis thaliana HOM05D006133 ORTHO05D007855 2.6e-13 80.1 209 31.1
A04p26010 Brassica napus HOM05D006133 ORTHO05D007855 5.9e-13 79.0 128 36.7
AL4G29540 Arabidopsis lyrata HOM05D006133 ORTHO05D007855 1.3e-12 77.8 209 31.1
DCAR_028075 Daucus carota HOM05D006133 ORTHO05D007855 5.0e-12 75.9 141 34.8
Mapoly0103s0052 Marchantia polymorpha HOM05D006133 ORTHO05D007855 5.0e-12 75.9 138 31.2
Os07g0208801 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 8.5e-12 75.1 68 60.3
C04p15330 Brassica napus HOM05D006133 ORTHO05D007855 3.2e-11 73.2 165 30.3
C04p63360 Brassica napus HOM05D006133 ORTHO05D007855 3.2e-11 73.2 136 33.1
BcaC02g11457 Brassica carinata HOM05D006133 ORTHO05D007855 5.5e-11 72.4 145 31.7
Gohir.D10G026300 Gossypium hirsutum HOM05D006133 ORTHO05D007855 9.4e-11 71.6 98 39.8
BraA04t18104Z Brassica rapa HOM05D006133 ORTHO05D007855 2.7e-10 70.1 116 34.5
Sed0025328 Sechium edule HOM05D006133 ORTHO05D007855 8.0e-10 68.6 98 40.8
Dinv07556 Davidia involucrata HOM05D006133 ORTHO05D007855 1.4e-09 67.8 97 40.2
Psat7g113640 Pisum sativum HOM05D006133 ORTHO05D007855 1.4e-09 67.8 153 30.1
Rhsim13G0177600 Rhododendron simsii HOM05D006133 ORTHO05D007855 2.3e-09 67.0 161 30.4
Solyc02g078290.4 Solanum lycopersicum HOM05D006133 ORTHO05D007855 2.3e-09 67.0 102 41.2
Zm00001eb269380 Zea mays HOM05D000901 ORTHO05D005921 2.3e-09 67.0 52 69.2
BolC4t23106H Brassica oleracea HOM05D006133 ORTHO05D007855 7.5e-08 62.0 124 32.3
Cc01_g03500 Coffea canephora HOM05D006133 ORTHO05D007855 9.7e-08 61.6 79 38.0
Sp4g16180 Schrenkiella parvula HOM05D006133 ORTHO05D007855 3.7e-07 59.7 149 28.9
CANSAT35G1333 Cannabis sativa HOM05D006133 ORTHO05D007855 6.3e-07 58.9 153 28.1


User provided reference genes

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