Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb304150 Zea mays HOM05D013211 ORTHO05D007975 2.0e-146 522.3 253 100.0
Zm00001eb299730 Zea mays HOM05D013211 ORTHO05D007975 1.1e-112 410.2 233 86.3
Zm00001eb174270 Zea mays HOM05D013211 ORTHO05D007975 1.3e-63 247.3 249 53.0
Zm00001eb412570 Zea mays HOM05D013211 ORTHO05D007975 8.6e-52 208.0 226 50.4
Zm00001eb421560 Zea mays HOM05D013211 ORTHO05D007975 1.5e-43 180.6 97 84.5
Zm00001eb225810 Zea mays HOM05D013211 ORTHO05D007975 1.8e-33 147.1 95 68.4
Zm00001eb408550 Zea mays HOM05D013211 ORTHO05D007975 3.6e-18 96.3 206 35.0
Rhsim04G0084200 Rhododendron simsii HOM05D000023 ORTHO05D000014 8.4e-15 85.1 248 23.0
RhsimUnG0127700 Rhododendron simsii HOM05D000023 ORTHO05D000014 8.4e-15 85.1 275 21.8
Rhsim02G0219500 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.1e-14 84.7 275 21.8
Rhsim04G0137200 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.1e-14 84.7 275 21.8
Rhsim02G0038300 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.9e-14 84.0 275 22.2
Manes.15G153233 Manihot esculenta HOM05D000023 ORTHO05D000014 5.4e-14 82.4 253 26.9
PGR042G3512 Punica granatum HOM05D000023 ORTHO05D000014 9.2e-14 81.6 249 25.3
PGR044G0603 Punica granatum HOM05D000023 ORTHO05D000014 9.2e-14 81.6 249 24.9
RhsimUnG0234800 Rhododendron simsii HOM05D000023 ORTHO05D000014 9.2e-14 81.6 275 21.5
Manes.07G082226 Manihot esculenta HOM05D000023 ORTHO05D000014 2.1e-13 80.5 251 26.7
Manes.09G071609 Manihot esculenta HOM05D000023 ORTHO05D000014 2.7e-13 80.1 254 25.2
PGR042G2456 Punica granatum HOM05D000023 ORTHO05D000014 3.5e-13 79.7 251 25.1
Manes.17G022250 Manihot esculenta HOM05D000023 ORTHO05D000014 1.3e-12 77.8 256 25.4
Aqoxy7G01711 Aquilegia oxysepala HOM05D000023 ORTHO05D000014 1.7e-12 77.4 246 27.2
Aqoxy7G02685 Aquilegia oxysepala HOM05D000023 ORTHO05D000014 1.7e-12 77.4 249 28.5
PGR142G4300 Punica granatum HOM05D000023 ORTHO05D000014 2.3e-12 77.0 251 24.3
Cc03_g13100 Coffea canephora HOM05D018247 ORTHO05D009195 3.0e-12 76.6 266 25.6
PGR031G0273 Punica granatum HOM05D000023 ORTHO05D000014 3.9e-12 76.3 251 24.3
arahy.Tifrunner.gnm1.ann1.P25VMU Arachis hypogaea HOM05D000023 ORTHO05D000014 9.6e-11 71.6 245 22.4
Hund00853 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.2e-10 71.2 262 25.6
Hund04216 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.2e-10 71.2 267 24.0
arahy.Tifrunner.gnm1.ann1.MA71W9 Arachis hypogaea HOM05D000023 ORTHO05D000014 1.6e-10 70.9 245 22.9
arahy.Tifrunner.gnm1.ann1.ZL8DQS Arachis hypogaea HOM05D000023 ORTHO05D000014 1.6e-10 70.9 245 22.9
Hund09860 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.6e-10 70.9 267 24.0
arahy.Tifrunner.gnm1.ann1.3WQ4BR Arachis hypogaea HOM05D000023 ORTHO05D000014 2.1e-10 70.5 245 22.9
arahy.Tifrunner.gnm1.ann1.LS674H Arachis hypogaea HOM05D000023 ORTHO05D000014 2.1e-10 70.5 245 22.9
Hund01377 Selenicereus undatus HOM05D000023 ORTHO05D000014 3.6e-10 69.7 264 22.3
arahy.Tifrunner.gnm1.ann1.CXMR2S Arachis hypogaea HOM05D000023 ORTHO05D000014 4.7e-10 69.3 250 23.6
arahy.Tifrunner.gnm1.ann1.FVUD3C Arachis hypogaea HOM05D000023 ORTHO05D000014 4.7e-10 69.3 245 22.4
arahy.Tifrunner.gnm1.ann1.DUJ27C Arachis hypogaea HOM05D000023 ORTHO05D000014 6.2e-10 68.9 245 22.9
PSO447G0187 Papaver somniferum HOM05D000023 ORTHO05D000014 6.2e-10 68.9 257 27.6
arahy.Tifrunner.gnm1.ann1.V51XDN Arachis hypogaea HOM05D000023 ORTHO05D000014 1.1e-09 68.2 245 22.4
CiPaw.07G170200 Carya illinoinensis HOM05D000023 ORTHO05D000014 1.8e-09 67.4 246 24.4
arahy.Tifrunner.gnm1.ann1.T6K3NP Arachis hypogaea HOM05D000023 ORTHO05D000014 2.4e-09 67.0 245 22.0
CiPaw.01G093600 Carya illinoinensis HOM05D000023 ORTHO05D000014 2.4e-09 67.0 246 24.0
arahy.Tifrunner.gnm1.ann1.SSF1RD Arachis hypogaea HOM05D000023 ORTHO05D000014 4.0e-09 66.2 251 22.7
arahy.Tifrunner.gnm1.ann1.H1YCBP Arachis hypogaea HOM05D000023 ORTHO05D000014 5.2e-09 65.9 245 22.0
CiPaw.03G191500 Carya illinoinensis HOM05D000023 ORTHO05D000014 5.2e-09 65.9 246 24.0
CiPaw.13G120100 Carya illinoinensis HOM05D000023 ORTHO05D000014 5.2e-09 65.9 246 24.8
ATR0547G001 Amborella trichopoda HOM05D000023 ORTHO05D007975 6.9e-09 65.5 90 33.3
PGR031G2672 Punica granatum HOM05D000023 ORTHO05D000014 6.9e-09 65.5 244 21.7
Hund30017 Selenicereus undatus HOM05D000023 ORTHO05D000014 6.9e-09 65.5 262 22.9
arahy.Tifrunner.gnm1.ann1.7GC0T1 Arachis hypogaea HOM05D000023 ORTHO05D000014 9.0e-09 65.1 243 21.8
MBI18_g10388_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 9.0e-09 65.1 252 25.4
Hund24696 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.5e-08 64.3 249 26.1
QL01p014593 Quercus lobata HOM05D000023 ORTHO05D000014 2.0e-08 63.9 243 22.2
QL05p035277 Quercus lobata HOM05D000023 ORTHO05D000014 2.0e-08 63.9 243 22.2
QL10p044694 Quercus lobata HOM05D000023 ORTHO05D000014 2.0e-08 63.9 243 22.2
ATR0745G049 Amborella trichopoda HOM05D000023 ORTHO05D007975 2.6e-08 63.5 90 33.3
FvH4_3g33921 Fragaria vesca HOM05D000023 ORTHO05D000014 2.6e-08 63.5 242 22.7
Hma1.2p1_0793F.1_g218611 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 2.6e-08 63.5 247 24.3
PGR102G2666 Punica granatum HOM05D000023 ORTHO05D000014 2.6e-08 63.5 228 25.0
ATR0753G078 Amborella trichopoda HOM05D000023 ORTHO05D007975 3.4e-08 63.2 90 32.2
PSO801G0066 Papaver somniferum HOM05D000023 ORTHO05D000014 4.4e-08 62.8 253 25.3
Hund10078 Selenicereus undatus HOM05D000023 ORTHO05D000014 4.4e-08 62.8 242 22.7
ATR0127G033 Amborella trichopoda HOM05D000023 ORTHO05D007975 5.8e-08 62.4 113 31.0
QL10p062599 Quercus lobata HOM05D000023 ORTHO05D000014 5.8e-08 62.4 243 21.8
Hund08340 Selenicereus undatus HOM05D000023 ORTHO05D000014 5.8e-08 62.4 260 23.8
ATR0594G162 Amborella trichopoda HOM05D000023 ORTHO05D007975 7.6e-08 62.0 109 30.3
Hma1.2p1_0754F.1_g213020 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 7.6e-08 62.0 247 23.9
ATR0099G042 Amborella trichopoda HOM05D000023 ORTHO05D007975 9.9e-08 61.6 90 34.4
ATR1114G001 Amborella trichopoda HOM05D000023 ORTHO05D007975 9.9e-08 61.6 90 32.2
Lj4g0011188 Lotus japonicus HOM05D000023 ORTHO05D000014 9.9e-08 61.6 247 22.3
PSO729G0042 Papaver somniferum HOM05D000023 ORTHO05D000014 9.9e-08 61.6 250 26.0
ATR0757G006 Amborella trichopoda HOM05D000023 ORTHO05D007975 1.7e-07 60.8 90 32.2
arahy.Tifrunner.gnm1.ann1.B49DU3 Arachis hypogaea HOM05D000023 ORTHO05D000014 1.7e-07 60.8 249 24.1
CiPaw.15G074600 Carya illinoinensis HOM05D000023 ORTHO05D000014 2.2e-07 60.5 244 20.5
Lj2g0005504 Lotus japonicus HOM05D000023 ORTHO05D000014 2.2e-07 60.5 99 32.3
TPR.G36288 Trifolium pratense HOM05D000023 ORTHO05D000014 2.2e-07 60.5 97 29.9
VMungo0647G2065 Vigna mungo HOM05D000023 ORTHO05D000014 2.2e-07 60.5 104 29.8
PSO170G5715 Papaver somniferum HOM05D000023 ORTHO05D000014 2.9e-07 60.1 250 25.2
RcHm_v2.0_Chr2g0168971 Rosa chinensis HOM05D000023 ORTHO05D000014 2.9e-07 60.1 78 35.9
Hund22679 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.9e-07 60.1 270 21.5
ATR1132G105 Amborella trichopoda HOM05D000023 ORTHO05D007975 3.8e-07 59.7 90 31.1
CiPaw.05G170000 Carya illinoinensis HOM05D000023 ORTHO05D000014 3.8e-07 59.7 247 22.7
CiPaw.13G061100 Carya illinoinensis HOM05D000023 ORTHO05D000014 3.8e-07 59.7 246 21.1
Lj6g0007513 Lotus japonicus HOM05D000023 ORTHO05D000014 3.8e-07 59.7 254 24.0
PSO063G7478 Papaver somniferum HOM05D000023 ORTHO05D000014 3.8e-07 59.7 248 24.2
PSO339G4462 Papaver somniferum HOM05D000023 ORTHO05D000014 3.8e-07 59.7 257 25.3
Hund15523 Selenicereus undatus HOM05D000023 ORTHO05D000014 3.8e-07 59.7 251 25.5
Hund22426 Selenicereus undatus HOM05D000023 ORTHO05D000014 3.8e-07 59.7 251 25.5
HPP92_019418 Vanilla planifolia HOM05D000023 ORTHO05D000014 3.8e-07 59.7 246 22.0
Manes.16G054458 Manihot esculenta HOM05D000023 ORTHO05D000014 4.9e-07 59.3 181 27.6
PSO017G0708 Papaver somniferum HOM05D000023 ORTHO05D000014 4.9e-07 59.3 250 25.2
PSO170G2034 Papaver somniferum HOM05D000023 ORTHO05D000014 4.9e-07 59.3 250 25.2
PSO170G5306 Papaver somniferum HOM05D000023 ORTHO05D000014 4.9e-07 59.3 250 25.2
PSO210G1880 Papaver somniferum HOM05D000023 ORTHO05D000014 4.9e-07 59.3 250 25.2
PSO210G6001 Papaver somniferum HOM05D000023 ORTHO05D000014 4.9e-07 59.3 250 25.2
PSO801G0088 Papaver somniferum HOM05D000023 ORTHO05D000014 4.9e-07 59.3 250 25.2
ATR0568G163 Amborella trichopoda HOM05D000023 ORTHO05D007975 6.4e-07 58.9 90 32.2
ATR0745G052 Amborella trichopoda HOM05D000023 ORTHO05D007975 6.4e-07 58.9 109 28.4
ATR1145G033 Amborella trichopoda HOM05D000023 ORTHO05D007975 6.4e-07 58.9 85 32.9
Hund18264 Selenicereus undatus HOM05D000023 ORTHO05D000014 6.4e-07 58.9 250 25.6
ATR0594G108 Amborella trichopoda HOM05D000023 ORTHO05D007975 8.4e-07 58.5 109 29.4
arahy.Tifrunner.gnm1.ann1.HN1TIB Arachis hypogaea HOM05D000023 ORTHO05D000014 8.4e-07 58.5 242 25.6
Hund04838 Selenicereus undatus HOM05D000023 ORTHO05D000014 8.4e-07 58.5 251 25.5
arahy.Tifrunner.gnm1.ann1.3ZEH7Z Arachis hypogaea HOM05D000023 ORTHO05D000014 1.1e-06 58.2 245 23.3
MBI19_g32734_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 1.4e-06 57.8 250 22.4
Hund10515 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.4e-06 57.8 251 25.1
TAR711G0001 Trochodendron aralioides HOM05D000023 ORTHO05D000014 1.4e-06 57.8 83 32.5
QL09p045098 Quercus lobata HOM05D000023 ORTHO05D000014 1.9e-06 57.4 100 28.0
SHI12212 Sapria himalayana HOM05D000023 ORTHO05D000014 1.9e-06 57.4 242 18.6
ATR0751G256 Amborella trichopoda HOM05D000023 ORTHO05D007975 2.4e-06 57.0 90 31.1
ATR0767G160 Amborella trichopoda HOM05D000023 ORTHO05D007975 3.2e-06 56.6 85 32.9
arahy.Tifrunner.gnm1.ann1.6B5FLC Arachis hypogaea HOM05D000023 ORTHO05D000014 4.2e-06 56.2 245 22.9
arahy.Tifrunner.gnm1.ann1.C29R3S Arachis hypogaea HOM05D000023 ORTHO05D000014 4.2e-06 56.2 245 22.9
arahy.Tifrunner.gnm1.ann1.LNUL8Y Arachis hypogaea HOM05D000023 ORTHO05D000014 4.2e-06 56.2 245 22.9
arahy.Tifrunner.gnm1.ann1.V8QJJM Arachis hypogaea HOM05D000023 ORTHO05D000014 4.2e-06 56.2 242 23.1
PSO063G2626 Papaver somniferum HOM05D000023 ORTHO05D000014 4.2e-06 56.2 248 23.4
ATR0525G001 Amborella trichopoda HOM05D000023 ORTHO05D007975 5.4e-06 55.8 83 34.9
ATR1120G096 Amborella trichopoda HOM05D000023 ORTHO05D007975 5.4e-06 55.8 90 31.1
arahy.Tifrunner.gnm1.ann1.IG72V0 Arachis hypogaea HOM05D000023 ORTHO05D000014 5.4e-06 55.8 245 22.9
ATR0639G001 Amborella trichopoda HOM05D000023 ORTHO05D007975 7.1e-06 55.5 90 31.1
ECA247G3989 Erigeron canadensis HOM05D000023 ORTHO05D000014 7.1e-06 55.5 245 22.4
MBI13_g29627_MAGBIO Magnolia biondii HOM05D003263 ORTHO05D011312 7.1e-06 55.5 225 23.6
PSO302G0120 Papaver somniferum HOM05D000023 ORTHO05D000014 9.3e-06 55.1 270 23.0
QL02p005214 Quercus lobata HOM05D000023 ORTHO05D000014 9.3e-06 55.1 86 27.9


User provided reference genes

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