Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb296960 Zea mays HOM05D001689 ORTHO05D001643 3.8e-28 127.5 65 100.0
Zm00001eb213250 Zea mays HOM05D001689 ORTHO05D001643 6.1e-10 67.0 45 77.8
Os03g0788800 Oryza sativa ssp. japonica HOM05D001689 ORTHO05D001643 3.9e-09 64.3 45 73.3
FAN24G1266 Fragaria x ananassa HOM05D000011 ORTHO05D000157 2.5e-08 61.6 60 51.7
FAN17G0949 Fragaria x ananassa HOM05D000011 ORTHO05D000157 3.3e-08 61.2 56 55.4
Zm00001eb114260 Zea mays HOM05D001689 ORTHO05D442944 3.3e-08 61.2 40 75.0
FAN16G2174 Fragaria x ananassa HOM05D000011 ORTHO05D000157 7.4e-08 60.1 57 52.6
FAN16G0017 Fragaria x ananassa HOM05D001689 ORTHO05D001643 9.7e-08 59.7 53 56.6
TAR369G0810 Trochodendron aralioides HOM05D001689 ORTHO05D001643 9.7e-08 59.7 46 67.4
FAN11G2970 Fragaria x ananassa HOM05D001689 ORTHO05D001643 2.2e-07 58.5 53 52.8
FvH4_3g26760 Fragaria vesca HOM05D001689 ORTHO05D001643 2.8e-07 58.2 51 54.9
FAN02G3678 Fragaria x ananassa HOM05D000011 ORTHO05D000157 2.8e-07 58.2 56 51.8
FAN21G1431 Fragaria x ananassa HOM05D001689 ORTHO05D001643 2.8e-07 58.2 51 54.9
FAN25G3558 Fragaria x ananassa HOM05D001689 ORTHO05D001643 2.8e-07 58.2 51 54.9
TAR111G0001 Trochodendron aralioides HOM05D001689 ORTHO05D001643 3.7e-07 57.8 46 65.2
TAR633G2666 Trochodendron aralioides HOM05D001689 ORTHO05D001643 3.7e-07 57.8 46 65.2
ATR0697G017 Amborella trichopoda HOM05D001689 ORTHO05D001643 1.4e-06 55.8 45 64.4
arahy.Tifrunner.gnm1.ann1.RJEI5H Arachis hypogaea HOM05D001689 ORTHO05D001643 1.4e-06 55.8 57 52.6
CDE07G0231 Ceratophyllum demersum HOM05D001689 ORTHO05D001643 1.4e-06 55.8 51 58.8
arahy.Tifrunner.gnm1.ann1.AZ9MNR Arachis hypogaea HOM05D001689 ORTHO05D001643 1.8e-06 55.5 57 52.6
Nn6g34594 Nelumbo nucifera HOM05D001689 ORTHO05D001643 1.8e-06 55.5 45 66.7
THA.LOC104799575 Tarenaya hassleriana HOM05D001689 ORTHO05D001643 1.8e-06 55.5 47 57.4
Aqoxy1G00591 Aquilegia oxysepala HOM05D001689 ORTHO05D001643 2.4e-06 55.1 45 62.2
CDE06G0483 Ceratophyllum demersum HOM05D001689 ORTHO05D001643 2.4e-06 55.1 46 63.0
THA.LOC104810949 Tarenaya hassleriana HOM05D001689 ORTHO05D001643 2.4e-06 55.1 47 57.4
CANSAT54G1587 Cannabis sativa HOM05D001689 ORTHO05D001643 3.1e-06 54.7 51 54.9
PGR119G0678 Punica granatum HOM05D001689 ORTHO05D001643 3.1e-06 54.7 45 62.2
HPP92_018632 Vanilla planifolia HOM05D001689 ORTHO05D001643 3.1e-06 54.7 45 57.8
Actinidia03859 Actinidia chinensis HOM05D001689 ORTHO05D001643 4.1e-06 54.3 45 60.0
Actinidia03967 Actinidia chinensis HOM05D001689 ORTHO05D001643 4.1e-06 54.3 45 60.0
Os11g0572500 Oryza sativa ssp. japonica HOM05D001689 ORTHO05D001643 4.1e-06 54.3 44 65.9
Ah.08g222260 Amaranthus hybridus HOM05D001689 ORTHO05D001643 5.3e-06 53.9 47 57.4
Migut.L01847 Erythranthe guttata HOM05D001689 ORTHO05D001643 5.3e-06 53.9 45 60.0
Nn2g14399 Nelumbo nucifera HOM05D001689 ORTHO05D001643 5.3e-06 53.9 45 64.4
vmacro14309 Vaccinium macrocarpon HOM05D001689 ORTHO05D001643 5.3e-06 53.9 46 58.7
HPP92_013284 Vanilla planifolia HOM05D001689 ORTHO05D001643 5.3e-06 53.9 45 64.4
Actinidia37774 Actinidia chinensis HOM05D002025 ORTHO05D001991 6.9e-06 53.5 55 54.5
RcHm_v2.0_Chr5g0049191 Rosa chinensis HOM05D001689 ORTHO05D001643 6.9e-06 53.5 51 51.0
VMungo1080G1682 Vigna mungo HOM05D001689 ORTHO05D001643 6.9e-06 53.5 44 61.4
MSTRG.10415 Avicennia marina HOM05D001689 ORTHO05D001643 9.0e-06 53.1 46 56.5
GSVIVG01037523001 Vitis vinifera HOM05D001689 ORTHO05D001643 9.0e-06 53.1 45 60.0


User provided reference genes

Program Settings