Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb295560 Zea mays HOM05D006865 ORTHO05D009005 5.3e-121 438.3 347 100.0
Zm00001eb343440 Zea mays HOM05D006865 ORTHO05D009005 2.4e-97 359.8 358 83.5
Os05g0559350 Oryza sativa ssp. japonica HOM05D006865 ORTHO05D009005 1.7e-82 310.5 361 78.1
Sc23g0005180 Simmondsia chinensis HOM05D006865 ORTHO05D009005 1.4e-28 131.3 239 44.8
Duzib187G1827 Durio zibethinus HOM05D006865 ORTHO05D009005 9.0e-28 128.6 361 48.2
PSO210G5031 Papaver somniferum HOM05D006865 ORTHO05D009005 3.4e-27 126.7 363 36.4
SGA_v2.0_scaffold163G38079 Striga asiatica HOM05D006865 ORTHO05D009005 5.0e-26 122.9 246 41.5
unitig_85.g27151 Utricularia gibba HOM05D006865 ORTHO05D009005 5.0e-26 122.9 257 39.3
Lj8A588T26 Lonicera japonica HOM05D006865 ORTHO05D009005 1.1e-25 121.7 172 45.3
DCAR_007711 Daucus carota HOM05D006865 ORTHO05D009005 1.4e-25 121.3 253 39.1
Migut.E01518 Erythranthe guttata HOM05D006865 ORTHO05D009005 1.4e-25 121.3 222 42.8
Potri.006G240400 Populus trichocarpa HOM05D006865 ORTHO05D009005 1.4e-25 121.3 354 45.2
MSTRG.14022 Avicennia marina HOM05D006865 ORTHO05D009005 2.5e-25 120.6 260 40.4
A02p01060 Brassica napus HOM05D006865 ORTHO05D009005 2.5e-25 120.6 253 37.9
BraA02t05086Z Brassica rapa HOM05D006865 ORTHO05D009005 2.5e-25 120.6 253 37.9
Manes.16G071500 Manihot esculenta HOM05D006865 ORTHO05D009005 2.5e-25 120.6 365 46.6
PSO210G4422 Papaver somniferum HOM05D006865 ORTHO05D009005 4.2e-25 119.8 362 39.0
EL10Ac2g04049 Beta vulgaris HOM05D006865 ORTHO05D009005 5.5e-25 119.4 262 38.2
Sp6g32050 Schrenkiella parvula HOM05D006865 ORTHO05D009005 7.2e-25 119.0 255 38.0
AT5G11550 Arabidopsis thaliana HOM05D006865 ORTHO05D009005 4.6e-24 116.3 257 37.7
C02p05200 Brassica napus HOM05D006865 ORTHO05D009005 4.6e-24 116.3 253 37.5
BolC2t06470H Brassica oleracea HOM05D006865 ORTHO05D009005 4.6e-24 116.3 253 37.5
BcaC03g13374 Brassica carinata HOM05D006865 ORTHO05D009005 6.1e-24 115.9 253 37.5
CSS0046438 Camellia sinensis var. sinensis HOM05D006865 ORTHO05D009005 6.1e-24 115.9 201 51.7
Carub.0006s1002 Capsella rubella HOM05D006865 ORTHO05D009005 7.9e-24 115.5 256 40.6
CiPaw.07G205700 Carya illinoinensis HOM05D006865 ORTHO05D009005 7.9e-24 115.5 340 35.6
BcaNung01933 Brassica carinata HOM05D006865 ORTHO05D009005 1.0e-23 115.2 255 36.9
Actinidia31233 Actinidia chinensis HOM05D006865 ORTHO05D009005 1.4e-23 114.8 249 39.4
Sabra06G0188000 Salix brachista HOM05D006865 ORTHO05D009005 1.8e-23 114.4 207 43.0
THA.LOC104814775 Tarenaya hassleriana HOM05D006865 ORTHO05D009005 1.8e-23 114.4 222 41.4
AL6G22220 Arabidopsis lyrata HOM05D006865 ORTHO05D009005 3.0e-23 113.6 255 37.6
A10p26220 Brassica napus HOM05D006865 ORTHO05D009005 3.9e-23 113.2 357 34.5
BraA10t44679Z Brassica rapa HOM05D006865 ORTHO05D009005 3.9e-23 113.2 357 34.5
Nitab4.5_0000664g0200 Nicotiana tabacum HOM05D006865 ORTHO05D009005 5.1e-23 112.8 353 38.0
QL12p029455 Quercus lobata HOM05D006865 ORTHO05D009005 6.7e-23 112.5 250 38.4
Thhalv10014169m.g Eutrema salsugineum HOM05D006865 ORTHO05D009005 8.8e-23 112.1 256 37.5
BolC9t59354H Brassica oleracea HOM05D006865 ORTHO05D009005 1.1e-22 111.7 357 34.7
CDE02G3046 Ceratophyllum demersum HOM05D004680 ORTHO05D005939 1.5e-22 111.3 352 33.2
MD15G1095700 Malus domestica HOM05D006865 ORTHO05D009005 1.5e-22 111.3 250 43.6
Prupe.1G450700 Prunus persica HOM05D006865 ORTHO05D009005 1.5e-22 111.3 220 39.1
CARHR201670 Cardamine hirsuta HOM05D006865 ORTHO05D009005 2.0e-22 110.9 255 37.6
CDE08G1680 Ceratophyllum demersum HOM05D006865 ORTHO05D009005 2.0e-22 110.9 329 37.4
AUR62009307 Chenopodium quinoa HOM05D006865 ORTHO05D009005 2.5e-22 110.5 257 38.5
Medtr3g110138 Medicago truncatula HOM05D006865 ORTHO05D009005 2.5e-22 110.5 237 38.0
Atru.chr7.2136 Acer truncatum HOM05D006865 ORTHO05D009005 3.3e-22 110.2 205 43.9
BcaC04g19215 Brassica carinata HOM05D006865 ORTHO05D009005 3.3e-22 110.2 357 34.5
C09p65260 Brassica napus HOM05D006865 ORTHO05D009005 3.3e-22 110.2 357 34.5
ECA248G0081 Erigeron canadensis HOM05D006865 ORTHO05D009005 3.3e-22 110.2 169 46.2
TWI63G0791 Tripterygium wilfordii HOM05D006865 ORTHO05D009005 3.3e-22 110.2 354 44.6
FAN15G3339 Fragaria x ananassa HOM05D006865 ORTHO05D009005 7.4e-22 109.0 221 42.5
BcaB08g37044 Brassica carinata HOM05D006865 ORTHO05D009005 9.7e-22 108.6 352 37.2
PGR044G0390 Punica granatum HOM05D006865 ORTHO05D009005 1.3e-21 108.2 255 36.5
Nn3g18133 Nelumbo nucifera HOM05D006865 ORTHO05D009005 1.7e-21 107.8 369 40.7
Medtr3g110088 Medicago truncatula HOM05D006865 ORTHO05D009005 2.8e-21 107.1 237 37.1
HPP92_023263 Vanilla planifolia HOM05D006865 ORTHO05D009005 2.8e-21 107.1 348 47.1
HPP92_023303 Vanilla planifolia HOM05D006865 ORTHO05D009005 2.8e-21 107.1 348 46.8
Cc08_g09210 Coffea canephora HOM05D006865 ORTHO05D009005 3.7e-21 106.7 376 41.8
RcHm_v2.0_Chr6g0305961 Rosa chinensis HOM05D006865 ORTHO05D009005 3.7e-21 106.7 254 37.4
Ciclev10008902m.g Citrus clementina HOM05D006865 ORTHO05D009005 6.3e-21 105.9 351 38.7
Peaxi162Scf00276g00123 Petunia axillaris HOM05D006865 ORTHO05D009005 1.1e-20 105.1 361 37.4
FvH4_2g35860 Fragaria vesca HOM05D006865 ORTHO05D009005 1.8e-20 104.4 217 42.4
HanXRQChr11g0351701 Helianthus annuus HOM05D006865 ORTHO05D009005 2.4e-20 104.0 170 44.7
Glyma.06G083600 Glycine max HOM05D006865 ORTHO05D009005 3.1e-20 103.6 164 45.7
Sopen11g028930 Solanum pennellii HOM05D006865 ORTHO05D009005 3.1e-20 103.6 166 45.8
PGSC0003DMG400018564 Solanum tuberosum HOM05D006865 ORTHO05D009005 3.1e-20 103.6 166 45.8
Cfa016677 Carpinus fangiana HOM05D006865 ORTHO05D009005 4.1e-20 103.2 196 42.9
Ca_15607_v3 Cicer arietinum L. HOM05D006865 ORTHO05D009005 4.1e-20 103.2 187 42.8
FAN27G2310 Fragaria x ananassa HOM05D006865 ORTHO05D009005 4.1e-20 103.2 217 41.9
Nitab4.5_0001567g0190 Nicotiana tabacum HOM05D006865 ORTHO05D009005 4.1e-20 103.2 358 37.2
Solyc11g071240.2 Solanum lycopersicum HOM05D006865 ORTHO05D009005 5.3e-20 102.8 166 45.8
Aa31LG3G15650 Aethionema arabicum HOM05D006865 ORTHO05D009005 6.9e-20 102.4 347 35.7
Hma1.2p1_1163F.1_g262770 Hydrangea macrophylla HOM05D006865 ORTHO05D009005 9.1e-20 102.1 347 40.9
Haze_19694 Corylus avellana HOM05D006865 ORTHO05D009005 1.2e-19 101.7 196 42.9
Lsat_1_v5_gn_1_49660 Lactuca sativa HOM05D006865 ORTHO05D009005 3.4e-19 100.1 170 43.5
Glyma.04G081900 Glycine max HOM05D006865 ORTHO05D009005 4.5e-19 99.8 164 44.5
Lalb_Chr23g0269541 Lupinus albus HOM05D006865 ORTHO05D009005 5.9e-19 99.4 209 38.3
Psat5g022760 Pisum sativum HOM05D006865 ORTHO05D009005 5.9e-19 99.4 153 44.4
CsaV3_3G048620 Cucumis sativus L. HOM05D006865 ORTHO05D009005 2.2e-18 97.4 249 33.3
Phvul.009G107700 Phaseolus vulgaris HOM05D006865 ORTHO05D009005 5.0e-18 96.3 197 40.6
Lj1g0027381 Lotus japonicus HOM05D006865 ORTHO05D009005 1.9e-17 94.4 140 46.4
VMungo1309G1411 Vigna mungo HOM05D006865 ORTHO05D009005 3.2e-17 93.6 208 39.4
ClCG11G015200 Citrullus lanatus HOM05D006865 ORTHO05D009005 5.5e-17 92.8 249 33.3
Sed0006345 Sechium edule HOM05D006865 ORTHO05D009005 9.4e-17 92.0 260 33.5
CANSAT25G0847 Cannabis sativa HOM05D006865 ORTHO05D009005 1.2e-16 91.7 251 33.5
Dinv30268 Davidia involucrata HOM05D006865 ORTHO05D009005 2.7e-16 90.5 323 38.7
MELO3C003458.2 Cucumis melo HOM05D006865 ORTHO05D009005 6.1e-16 89.4 183 37.7
Thecc.09G042300 Theobroma cacao HOM05D006865 ORTHO05D009005 2.0e-14 84.3 362 42.3
Oeu031553.1 Olea europaea HOM05D006865 ORTHO05D009005 8.2e-13 79.0 326 39.6
TAR636G1122 Trochodendron aralioides HOM05D006865 ORTHO05D009005 1.4e-12 78.2 371 33.2
Nn2g11491 Nelumbo nucifera HOM05D006865 ORTHO05D009005 1.3e-10 71.6 113 46.9
BolC3t13095H Brassica oleracea HOM05D006865 ORTHO05D009005 2.9e-10 70.5 111 43.2
MBI01_g38801_MAGBIO Magnolia biondii HOM05D006865 ORTHO05D009005 2.5e-09 67.4 75 49.3
SGA_v2.0_scaffold90G27623 Striga asiatica HOM05D000271 ORTHO05D004758 2.7e-08 63.9 196 32.7
AagrBONN_evm.TU.Sc2ySwM_228.4099 Anthoceros agrestis HOM05D000271 ORTHO05D004758 1.8e-07 61.2 161 33.5
ATR0584G241 Amborella trichopoda HOM05D000271 ORTHO05D004758 4.0e-07 60.1 195 31.8
Zm00001eb181840 Zea mays HOM05D000271 ORTHO05D004758 4.0e-07 60.1 194 35.1
Os02g0548700 Oryza sativa ssp. japonica HOM05D000271 ORTHO05D004758 2.0e-06 57.8 204 36.8
BcaB01g05476 Brassica carinata HOM05D006865 ORTHO05D009005 3.3e-06 57.0 171 36.3
Sc08g0001720 Simmondsia chinensis HOM05D000271 ORTHO05D004758 4.4e-06 56.6 182 30.2
PGR042G1460 Punica granatum HOM05D000271 ORTHO05D004758 9.7e-06 55.5 197 29.9


User provided reference genes

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