Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb291490 Zea mays HOM05D000461 ORTHO05D009768 1.2e-109 399.8 193 100.0
Zm00001eb057620 Zea mays HOM05D000461 ORTHO05D009768 3.4e-109 398.3 193 99.5
Zm00001eb222780 Zea mays HOM05D000461 ORTHO05D009768 3.4e-109 398.3 193 99.5
Zm00001eb308580 Zea mays HOM05D000461 ORTHO05D009768 3.4e-109 398.3 193 99.5
Zm00001eb069190 Zea mays HOM05D000461 ORTHO05D009768 4.9e-100 367.9 183 97.8
HPP92_016586 Vanilla planifolia HOM05D000461 ORTHO05D009768 1.9e-80 302.8 183 78.7
Oeu019359.1 Olea europaea HOM05D000461 ORTHO05D009768 1.1e-78 297.0 183 77.0
TAR626G0736 Trochodendron aralioides HOM05D000461 ORTHO05D009768 1.8e-78 296.2 183 77.0
CiPaw.11G175300 Carya illinoinensis HOM05D000461 ORTHO05D009768 2.4e-78 295.8 183 78.1
FvH4_3g20850 Fragaria vesca HOM05D000461 ORTHO05D009768 4.1e-78 295.0 183 78.1
RcHm_v2.0_Chr5g0035161 Rosa chinensis HOM05D000461 ORTHO05D009768 4.1e-78 295.0 183 78.1
Sopen07g031690 Solanum pennellii HOM05D000461 ORTHO05D009768 5.3e-78 294.7 183 78.1
Atru.chr2.2833 Acer truncatum HOM05D000461 ORTHO05D009768 6.9e-78 294.3 183 77.6
ClCG11G018420 Citrullus lanatus HOM05D000461 ORTHO05D009768 9.0e-78 293.9 183 76.5
Nn1g03933 Nelumbo nucifera HOM05D000461 ORTHO05D009768 9.0e-78 293.9 183 77.0
Solyc07g063510.3 Solanum lycopersicum HOM05D000461 ORTHO05D009768 9.0e-78 293.9 183 78.1
HanXRQChr11g0330921 Helianthus annuus HOM05D000461 ORTHO05D009768 1.2e-77 293.5 183 77.0
Peaxi162Scf01111g00017 Petunia axillaris HOM05D000461 ORTHO05D009768 1.5e-77 293.1 183 77.6
QL08p018730 Quercus lobata HOM05D000461 ORTHO05D009768 1.5e-77 293.1 183 77.6
QL93p2023_0115 Quercus lobata HOM05D000461 ORTHO05D009768 1.5e-77 293.1 183 77.6
arahy.Tifrunner.gnm1.ann1.58XN2N Arachis hypogaea HOM05D000461 ORTHO05D009768 3.4e-77 292.0 183 77.6
Lsat_1_v5_gn_7_106360 Lactuca sativa HOM05D000461 ORTHO05D009768 3.4e-77 292.0 183 76.0
PGSC0003DMG400019289 Solanum tuberosum HOM05D000461 ORTHO05D009768 3.4e-77 292.0 183 77.0
SGA_v2.0_scaffold34G13718 Striga asiatica HOM05D000461 ORTHO05D009768 3.4e-77 292.0 183 74.3
Lalb_Chr19g0134451 Lupinus albus HOM05D000461 ORTHO05D009768 4.5e-77 291.6 183 76.0
Hma1.2p1_1003F.1_g246700 Hydrangea macrophylla HOM05D000461 ORTHO05D009768 5.9e-77 291.2 183 77.6
arahy.Tifrunner.gnm1.ann1.QNW6LA Arachis hypogaea HOM05D000461 ORTHO05D009768 1.0e-76 290.4 183 77.0
ECA236G2753 Erigeron canadensis HOM05D000461 ORTHO05D009768 1.0e-76 290.4 183 75.4
Ca_17659_v3 Cicer arietinum L. HOM05D000461 ORTHO05D009768 1.3e-76 290.0 183 77.0
Dinv08334 Davidia involucrata HOM05D000461 ORTHO05D009768 1.3e-76 290.0 183 76.0
CANSAT11G0348 Cannabis sativa HOM05D000461 ORTHO05D009768 1.7e-76 289.7 183 77.0
Psat7g047120 Pisum sativum HOM05D000461 ORTHO05D009768 1.7e-76 289.7 183 76.5
CAN.G162.98 Capsicum annuum HOM05D000461 ORTHO05D009768 2.2e-76 289.3 183 76.5
MBI02_g10553_MAGBIO Magnolia biondii HOM05D000461 ORTHO05D009768 2.2e-76 289.3 199 72.9
TPR.G37406 Trifolium pratense HOM05D000461 ORTHO05D009768 2.9e-76 288.9 183 76.5
Nitab4.5_0002565g0060 Nicotiana tabacum HOM05D000461 ORTHO05D009768 3.8e-76 288.5 183 75.4
Cfa020516 Carpinus fangiana HOM05D000461 ORTHO05D009768 5.0e-76 288.1 183 76.0
Haze_09517 Corylus avellana HOM05D000461 ORTHO05D009768 5.0e-76 288.1 183 76.0
DCAR_013076 Daucus carota HOM05D000461 ORTHO05D009768 5.0e-76 288.1 183 75.4
Nitab4.5_0000297g0070 Nicotiana tabacum HOM05D000461 ORTHO05D009768 5.0e-76 288.1 183 75.4
Potri.011G127400 Populus trichocarpa HOM05D000461 ORTHO05D009768 6.5e-76 287.7 183 76.0
Cc05_g12580 Coffea canephora HOM05D000461 ORTHO05D009768 8.5e-76 287.3 183 76.0
Prupe.4G188800 Prunus persica HOM05D000461 ORTHO05D009768 8.5e-76 287.3 183 76.5
MELO3C018201.2 Cucumis melo HOM05D000461 ORTHO05D009768 1.1e-75 287.0 183 75.4
Glyma.12G147900 Glycine max HOM05D000461 ORTHO05D009768 1.1e-75 287.0 183 74.9
Gohir.D01G055500 Gossypium hirsutum HOM05D000461 ORTHO05D009768 1.1e-75 287.0 183 74.9
Gorai.002G075600 Gossypium raimondii HOM05D000461 ORTHO05D009768 1.1e-75 287.0 183 74.9
Medtr8g093250 Medicago truncatula HOM05D000461 ORTHO05D009768 1.1e-75 287.0 183 76.0
Thecc.07G073000 Theobroma cacao HOM05D000461 ORTHO05D009768 1.4e-75 286.6 177 76.8
Pp3c15_6180 Physcomitrium patens HOM05D000461 ORTHO05D009768 1.9e-75 286.2 183 74.3
Lj3g0022224 Lotus japonicus HOM05D000461 ORTHO05D009768 2.5e-75 285.8 183 74.9
COL.COLO4_09469 Corchorus olitorius HOM05D000461 ORTHO05D009768 3.2e-75 285.4 183 73.8
CsaV3_3G044400 Cucumis sativus L. HOM05D000461 ORTHO05D009768 3.2e-75 285.4 183 74.9
Manes.03G115700 Manihot esculenta HOM05D000461 ORTHO05D009768 7.2e-75 284.3 183 74.9
Phvul.011G154500 Phaseolus vulgaris HOM05D000461 ORTHO05D009768 7.2e-75 284.3 183 74.9
Sed0023337 Sechium edule HOM05D000461 ORTHO05D009768 7.2e-75 284.3 183 74.9
VMungo1127G1042 Vigna mungo HOM05D000461 ORTHO05D009768 7.2e-75 284.3 183 74.9
TWI39G0712 Tripterygium wilfordii HOM05D000461 ORTHO05D009768 1.2e-74 283.5 183 74.3
MD03G1220100 Malus domestica HOM05D000461 ORTHO05D009768 1.6e-74 283.1 183 74.3
CDE12G0333 Ceratophyllum demersum HOM05D000461 ORTHO05D009768 2.1e-74 282.7 183 74.3
Duzib213G0388 Durio zibethinus HOM05D000461 ORTHO05D009768 2.1e-74 282.7 183 73.8
Mapoly0032s0012 Marchantia polymorpha HOM05D000461 ORTHO05D009768 2.7e-74 282.3 183 72.7
Eucgr.H00422 Eucalyptus grandis HOM05D000461 ORTHO05D009768 3.6e-74 282.0 183 75.4
Migut.M00870 Erythranthe guttata HOM05D000461 ORTHO05D009768 4.6e-74 281.6 183 73.2
MSTRG.6849 Avicennia marina HOM05D000461 ORTHO05D009768 1.0e-73 280.4 183 72.7
Cpa.g.sc80.105 Carica papaya HOM05D000461 ORTHO05D009768 1.4e-73 280.0 183 74.3
Glyma.06G253602 Glycine max HOM05D000461 ORTHO05D009768 1.8e-73 279.6 183 73.2
Ah.04g164990 Amaranthus hybridus HOM05D000461 ORTHO05D009768 6.7e-73 277.7 183 74.3
EL10Ac4g08080 Beta vulgaris HOM05D000461 ORTHO05D009768 1.1e-72 276.9 183 73.2
SalBow8G3533 Salvia bowleyana HOM05D000461 ORTHO05D009768 1.1e-72 276.9 183 72.1
SEGI_18811 Sequoiadendron giganteum HOM05D000461 ORTHO05D009768 1.1e-72 276.9 184 69.6
AUR62015610 Chenopodium quinoa HOM05D000461 ORTHO05D009768 2.0e-72 276.2 183 71.0
AUR62029323 Chenopodium quinoa HOM05D000461 ORTHO05D009768 7.4e-72 274.2 177 72.3
Rhsim04G0018400 Rhododendron simsii HOM05D000461 ORTHO05D009768 9.7e-72 273.9 206 67.5
Sc03g0009640 Simmondsia chinensis HOM05D000461 ORTHO05D009768 9.7e-72 273.9 183 71.0
AagrBONN_evm.TU.Sc2ySwM_344.1693 Anthoceros agrestis HOM05D000461 ORTHO05D009768 6.3e-71 271.2 183 69.4
SMO137G0173 Selaginella moellendorffii HOM05D000461 ORTHO05D009768 6.9e-70 267.7 183 69.9
vmacro09551 Vaccinium macrocarpon HOM05D000461 ORTHO05D009768 3.4e-69 265.4 230 60.4
Hund27427 Selenicereus undatus HOM05D000461 ORTHO05D009768 2.1e-66 256.1 233 57.1
unitig_747.g21565 Utricularia gibba HOM05D000461 ORTHO05D009768 5.9e-61 238.0 182 64.8
CBR_g31136 Chara braunii HOM05D000461 ORTHO05D009768 1.7e-60 236.5 183 59.0
Lj1C852T3 Lonicera japonica HOM05D000461 ORTHO05D009768 9.7e-56 220.7 183 63.4
Cre06.g301650 Chlamydomonas reinhardtii HOM05D000461 ORTHO05D009768 3.7e-55 218.8 184 58.2
PRCOL_00003908 Prasinoderma coloniale HOM05D000461 ORTHO05D009768 3.2e-51 205.7 184 57.1
GSVIVG01014420001 Vitis vinifera HOM05D000461 ORTHO05D009768 5.5e-43 178.3 113 77.9
SEGI_34047 Sequoiadendron giganteum HOM05D000461 ORTHO05D009768 7.0e-30 134.8 114 59.6
Gohir.A01G068251 Gossypium hirsutum HOM05D000461 ORTHO05D009768 1.7e-28 130.2 80 78.8
Gohir.A01G068201 Gossypium hirsutum HOM05D000461 ORTHO05D009768 1.4e-25 120.6 80 68.8
ATR0274G001 Amborella trichopoda HOM05D000461 ORTHO05D009768 4.4e-24 115.5 77 67.5
SEGI_16587 Sequoiadendron giganteum HOM05D000415 ORTHO05D385778 9.9e-08 61.2 47 61.7
Os04g0636300 Oryza sativa ssp. japonica HOM05D000461 ORTHO05D009768 5.4e-06 55.5 27 92.6


User provided reference genes

Program Settings