Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb291210 Zea mays HOM05D000288 ORTHO05D443923 9.7e-46 186.4 92 100.0
Aqoxy7G00113 Aquilegia oxysepala HOM05D000288 ORTHO05D000173 9.5e-09 63.5 64 53.1
Aqoxy7G00135 Aquilegia oxysepala HOM05D000288 ORTHO05D000173 1.6e-08 62.8 40 77.5
BcaB08g37021 Brassica carinata HOM05D000288 ORTHO05D000173 1.8e-07 59.3 34 82.4
BcaB08g37023 Brassica carinata HOM05D000288 ORTHO05D000173 1.8e-07 59.3 34 82.4
BcaB08g37024 Brassica carinata HOM05D000288 ORTHO05D000173 1.8e-07 59.3 34 82.4
BcaB08g37026 Brassica carinata HOM05D000288 ORTHO05D000173 1.8e-07 59.3 34 82.4
BcaB08g37028 Brassica carinata HOM05D000288 ORTHO05D000173 1.8e-07 59.3 34 82.4
AUR62019147 Chenopodium quinoa HOM05D000288 ORTHO05D000173 2.3e-07 58.9 56 58.9
Lj3g0024087 Lotus japonicus HOM05D000288 ORTHO05D000173 3.0e-07 58.5 82 42.7
Os05g0489800 Oryza sativa ssp. japonica HOM05D000288 ORTHO05D000173 3.0e-07 58.5 80 51.2
BcaB08g37022 Brassica carinata HOM05D000288 ORTHO05D000173 4.0e-07 58.2 34 79.4
Cre02.g104800 Chlamydomonas reinhardtii HOM05D000288 ORTHO05D000173 5.2e-07 57.8 55 63.6
Cre16.g661450 Chlamydomonas reinhardtii HOM05D000288 ORTHO05D000173 5.2e-07 57.8 56 64.3
Hund22303 Selenicereus undatus HOM05D000288 ORTHO05D000173 6.8e-07 57.4 55 56.4
Thecc.01G345100 Theobroma cacao HOM05D000288 ORTHO05D000173 8.9e-07 57.0 57 54.4
Nn5g27372 Nelumbo nucifera HOM05D000288 ORTHO05D000173 1.5e-06 56.2 41 70.7
Aqoxy6G02430 Aquilegia oxysepala HOM05D000288 ORTHO05D000173 2.6e-06 55.5 44 65.9
BcaB08g37025 Brassica carinata HOM05D000288 ORTHO05D000173 2.6e-06 55.5 34 79.4
Lj4A793T53 Lonicera japonica HOM05D000288 ORTHO05D000173 2.6e-06 55.5 45 66.7
Os04g0450800 Oryza sativa ssp. japonica HOM05D000288 ORTHO05D000173 2.6e-06 55.5 45 64.4
EL10Ac3g05095 Beta vulgaris HOM05D000288 ORTHO05D000173 3.4e-06 55.1 45 66.7
MBI01_g36438_MAGBIO Magnolia biondii HOM05D002542 ORTHO05D005078 3.4e-06 55.1 72 51.4
EL10Ac4g08670 Beta vulgaris HOM05D000288 ORTHO05D000173 4.4e-06 54.7 71 42.3
THA.LOC104825875 Tarenaya hassleriana HOM05D000288 ORTHO05D000173 4.4e-06 54.7 37 75.7
CDE12G0744 Ceratophyllum demersum HOM05D000288 ORTHO05D000173 5.7e-06 54.3 53 62.3
LjContig00141g0020167 Lotus japonicus HOM05D000288 ORTHO05D000173 5.7e-06 54.3 54 59.3
HanXRQChr05g0163101 Helianthus annuus HOM05D000288 ORTHO05D000173 7.5e-06 53.9 67 50.7
PSO104G0052 Papaver somniferum HOM05D000288 ORTHO05D000173 7.5e-06 53.9 44 65.9
PSO170G5247 Papaver somniferum HOM05D000288 ORTHO05D000173 7.5e-06 53.9 55 54.5
PSO384G0743 Papaver somniferum HOM05D000288 ORTHO05D000173 7.5e-06 53.9 44 65.9
Potri.014G096400 Populus trichocarpa HOM05D000288 ORTHO05D000173 7.5e-06 53.9 41 58.5
Solyc01g086800.4 Solanum lycopersicum HOM05D000288 ORTHO05D000173 7.5e-06 53.9 55 60.0
CANSAT56G0699 Cannabis sativa HOM05D000288 ORTHO05D000173 9.8e-06 53.5 73 49.3
CBR_g50855 Chara braunii HOM05D002289 ORTHO05D133346 9.8e-06 53.5 59 54.2
Nitab4.5_0000128g0260 Nicotiana tabacum HOM05D000288 ORTHO05D004838 9.8e-06 53.5 45 64.4
Nitab4.5_0006824g0040 Nicotiana tabacum HOM05D000288 ORTHO05D000173 9.8e-06 53.5 45 64.4
Psat2g137360 Pisum sativum HOM05D000288 ORTHO05D000173 9.8e-06 53.5 46 63.0
SGA_v2.0_scaffold326G48752 Striga asiatica HOM05D000288 ORTHO05D000173 9.8e-06 53.5 45 64.4


User provided reference genes

Program Settings