Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb290060 Zea mays HOM05D010462 ORTHO05D012694 8.6e-237 823.2 386 100.0
Zm00001eb290070 Zea mays HOM05D010462 ORTHO05D012694 3.9e-173 611.7 384 77.9
Zm00001eb290010 Zea mays HOM05D010462 ORTHO05D012694 4.1e-162 575.1 407 72.0
Zm00001eb290020 Zea mays HOM05D010462 ORTHO05D012694 2.0e-161 572.8 407 71.5
Zm00001eb290000 Zea mays HOM05D010462 ORTHO05D012694 3.9e-149 531.9 381 68.8
Zm00001eb290090 Zea mays HOM05D010462 ORTHO05D012694 1.7e-139 500.0 407 64.6
Os05g0539300 Oryza sativa ssp. japonica HOM05D010462 ORTHO05D012694 1.2e-60 238.0 427 38.9
Os05g0539150 Oryza sativa ssp. japonica HOM05D010462 ORTHO05D012694 5.5e-58 229.2 430 37.9
Zm00001eb167880 Zea mays HOM05D010462 ORTHO05D012694 5.1e-56 222.6 424 39.9
Zm00001eb167860 Zea mays HOM05D010462 ORTHO05D012694 8.7e-56 221.9 425 40.5
Zm00001eb167900 Zea mays HOM05D010462 ORTHO05D012694 1.9e-55 220.7 420 38.6
Zm00001eb236630 Zea mays HOM05D010462 ORTHO05D012694 3.3e-55 219.9 420 40.7
Os05g0570350 Oryza sativa ssp. japonica HOM05D010462 ORTHO05D012694 3.2e-50 203.4 415 35.9
Os05g0570200 Oryza sativa ssp. japonica HOM05D010462 ORTHO05D012694 4.6e-49 199.5 390 35.6
Os05g0537700 Oryza sativa ssp. japonica HOM05D010462 ORTHO05D012694 2.0e-44 184.1 389 38.0
Os01g0673300 Oryza sativa ssp. japonica HOM05D010462 ORTHO05D012694 2.4e-37 160.6 415 33.0
Os01g0660700 Oryza sativa ssp. japonica HOM05D010462 ORTHO05D012694 7.4e-31 139.0 433 29.6
Os02g0318200 Oryza sativa ssp. japonica HOM05D010462 ORTHO05D012694 1.6e-20 104.8 409 27.4
Solyc08g082485.1 Solanum lycopersicum HOM05D000151 ORTHO05D000074 1.3e-14 85.1 396 26.8
TAR628G1200 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.4e-13 81.6 416 26.0
Os01g0774400 Oryza sativa ssp. japonica HOM05D010462 ORTHO05D012694 1.8e-13 81.3 90 46.7
TAR629G2629 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.8e-11 73.6 402 25.6
Aqoxy7G03473 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 8.6e-11 72.4 429 24.2
TAR525G0003 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.1e-10 72.0 398 25.6
TAR626G0415 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.3e-10 70.5 398 25.6
TWI38G0386 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 9.5e-10 68.9 370 24.6
TAR626G0819 Trochodendron aralioides HOM05D000151 ORTHO05D000074 8.0e-09 65.9 352 25.3
TAR629G1936 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.0e-08 65.5 402 25.9
TAR629G0126 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.8e-08 64.7 404 24.8
Sopen03g032220 Solanum pennellii HOM05D000151 ORTHO05D000074 6.8e-08 62.8 365 25.5
FAN12G3235 Fragaria x ananassa HOM05D000151 ORTHO05D000074 8.9e-08 62.4 139 33.1
Sopen03g031860 Solanum pennellii HOM05D000151 ORTHO05D000074 1.2e-07 62.0 397 23.9
Zm00001eb111030 Zea mays HOM05D010462 ORTHO05D012694 2.0e-07 61.2 42 64.3
PGSC0003DMG400018078 Solanum tuberosum HOM05D000151 ORTHO05D000074 2.6e-07 60.8 363 25.1
Peaxi162Scf00089g00158 Petunia axillaris HOM05D000151 ORTHO05D000074 5.7e-07 59.7 376 26.1
HanXRQChr02g0042691 Helianthus annuus HOM05D000151 ORTHO05D000074 7.5e-07 59.3 198 28.8
Rhsim02G0229800 Rhododendron simsii HOM05D000151 ORTHO05D000074 7.5e-07 59.3 334 23.1
FvH4_4g26310 Fragaria vesca HOM05D000151 ORTHO05D000074 9.8e-07 58.9 149 32.2
PGSC0003DMG400018077 Solanum tuberosum HOM05D000151 ORTHO05D000074 9.8e-07 58.9 361 24.7
Peaxi162Scf00089g00166 Petunia axillaris HOM05D000151 ORTHO05D000074 1.3e-06 58.5 434 23.3
Solyc03g113160.1 Solanum lycopersicum HOM05D000151 ORTHO05D000074 2.8e-06 57.4 190 30.0
TAR636G2641 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.8e-06 57.4 140 32.9
PGSC0003DMG400018105 Solanum tuberosum HOM05D000151 ORTHO05D000074 4.9e-06 56.6 412 25.5
Aqoxy4G02957 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 8.3e-06 55.8 381 24.4


User provided reference genes

Program Settings