Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb290000 Zea mays HOM05D010462 ORTHO05D012694 1.0e-240 836.3 399 100.0
Zm00001eb290070 Zea mays HOM05D010462 ORTHO05D012694 1.4e-152 543.5 388 70.6
Zm00001eb290060 Zea mays HOM05D010462 ORTHO05D012694 9.1e-149 530.8 381 68.8
Zm00001eb290010 Zea mays HOM05D010462 ORTHO05D012694 3.5e-148 528.9 409 65.5
Zm00001eb290020 Zea mays HOM05D010462 ORTHO05D012694 2.2e-147 526.2 409 65.0
Zm00001eb290090 Zea mays HOM05D010462 ORTHO05D012694 9.1e-125 451.1 409 58.2
Os05g0539300 Oryza sativa ssp. japonica HOM05D010462 ORTHO05D012694 7.6e-63 245.4 431 39.7
Zm00001eb167900 Zea mays HOM05D010462 ORTHO05D012694 1.2e-60 238.0 407 40.3
Zm00001eb167880 Zea mays HOM05D010462 ORTHO05D012694 1.6e-57 227.6 414 40.6
Zm00001eb167860 Zea mays HOM05D010462 ORTHO05D012694 6.3e-57 225.7 411 41.1
Zm00001eb236630 Zea mays HOM05D010462 ORTHO05D012694 8.2e-57 225.3 402 40.3
Os05g0539150 Oryza sativa ssp. japonica HOM05D010462 ORTHO05D012694 5.3e-56 222.6 428 36.9
Os05g0570200 Oryza sativa ssp. japonica HOM05D010462 ORTHO05D012694 1.6e-52 211.1 392 36.7
Os05g0570350 Oryza sativa ssp. japonica HOM05D010462 ORTHO05D012694 3.7e-49 199.9 429 32.4
Os05g0537700 Oryza sativa ssp. japonica HOM05D010462 ORTHO05D012694 1.8e-43 181.0 386 37.3
Os01g0673300 Oryza sativa ssp. japonica HOM05D010462 ORTHO05D012694 1.8e-32 144.4 394 31.7
Os01g0660700 Oryza sativa ssp. japonica HOM05D010462 ORTHO05D012694 1.7e-30 137.9 447 29.5
Os02g0318200 Oryza sativa ssp. japonica HOM05D010462 ORTHO05D012694 2.6e-18 97.4 409 27.4
Os01g0774400 Oryza sativa ssp. japonica HOM05D010462 ORTHO05D012694 3.5e-15 87.0 94 48.9
Solyc08g082485.1 Solanum lycopersicum HOM05D000151 ORTHO05D000074 4.0e-11 73.6 405 23.7
TAR629G2629 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.2e-10 72.0 404 23.3
TAR525G0003 Trochodendron aralioides HOM05D000151 ORTHO05D000074 7.5e-10 69.3 414 22.2
PGSC0003DMG400041413 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.3e-09 68.6 404 22.8
TWI38G0386 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.7e-09 68.2 356 24.4
TAR628G1200 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.2e-09 67.8 351 26.5
PGSC0003DMG400012270 Solanum tuberosum HOM05D000151 ORTHO05D000074 2.8e-09 67.4 404 22.0
TAR626G0415 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.8e-09 67.4 414 22.2
TAR629G1936 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.1e-08 65.5 404 23.5
CANSAT25G2327 Cannabis sativa HOM05D000151 ORTHO05D000074 2.4e-08 64.3 381 22.6
Aqoxy5G01389 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 3.5e-07 60.5 201 25.4
Aqoxy3G01208 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 4.5e-07 60.1 334 21.6
MD15G1237600 Malus domestica HOM05D000151 ORTHO05D000074 1.0e-06 58.9 359 23.4
Zm00001eb111030 Zea mays HOM05D010462 ORTHO05D012694 1.0e-06 58.9 36 72.2
Os11g0594600 Oryza sativa ssp. japonica HOM05D011330 ORTHO05D013903 2.3e-06 57.8 365 24.7
AUR62012295 Chenopodium quinoa HOM05D000151 ORTHO05D000074 3.8e-06 57.0 376 22.9
Sopen03g031860 Solanum pennellii HOM05D000151 ORTHO05D000074 3.8e-06 57.0 197 26.4
Dinv37496 Davidia involucrata HOM05D000151 ORTHO05D000074 8.6e-06 55.8 206 26.2
Os06g0148600 Oryza sativa ssp. japonica HOM05D011330 ORTHO05D000074 8.6e-06 55.8 405 22.5
Rhsim03G0212000 Rhododendron simsii HOM05D000002 ORTHO05D001134 8.6e-06 55.8 192 27.1
TAR626G0819 Trochodendron aralioides HOM05D000151 ORTHO05D000074 8.6e-06 55.8 91 31.9


User provided reference genes

Program Settings