Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb289430 Zea mays HOM05D001128 ORTHO05D000721 3.6e-195 684.9 377 100.0
Zm00001eb347770 Zea mays HOM05D001128 ORTHO05D000721 2.6e-97 359.8 306 75.8
Os01g0850000 Oryza sativa ssp. japonica HOM05D001128 ORTHO05D000721 7.7e-57 225.3 298 50.7
Zm00001eb147910 Zea mays HOM05D001128 ORTHO05D000721 2.4e-42 177.2 295 50.8
Os05g0453300 Oryza sativa ssp. japonica HOM05D001128 ORTHO05D000721 1.5e-31 141.4 123 63.4
Zm00001eb367680 Zea mays HOM05D001128 ORTHO05D000721 1.6e-30 137.9 311 44.4
MBI05_g02674_MAGBIO Magnolia biondii HOM05D001128 ORTHO05D000721 2.2e-27 127.5 305 40.3
Nn2g11296 Nelumbo nucifera HOM05D001128 ORTHO05D000721 6.0e-25 119.4 303 37.0
Thecc.05G027900 Theobroma cacao HOM05D001128 ORTHO05D000721 1.5e-23 114.8 281 39.1
ATR0210G013 Amborella trichopoda HOM05D001128 ORTHO05D000721 7.3e-23 112.5 299 34.8
MBI14_g02856_MAGBIO Magnolia biondii HOM05D001128 ORTHO05D000721 9.5e-23 112.1 293 39.2
TAR623G0478 Trochodendron aralioides HOM05D001128 ORTHO05D000721 2.1e-22 110.9 286 35.7
Cpa.g.sc56.66 Carica papaya HOM05D001128 ORTHO05D000721 2.8e-22 110.5 286 36.0
Actinidia13814 Actinidia chinensis HOM05D001128 ORTHO05D000721 1.4e-21 108.2 297 37.0
QL07p027947 Quercus lobata HOM05D001128 ORTHO05D000721 8.9e-21 105.5 284 40.1
Prupe.6G265300 Prunus persica HOM05D001128 ORTHO05D000721 1.5e-20 104.8 296 37.8
COL.COLO4_14683 Corchorus olitorius HOM05D001128 ORTHO05D000721 2.0e-20 104.4 283 39.6
Nitab4.5_0003264g0030 Nicotiana tabacum HOM05D001128 ORTHO05D000721 2.0e-20 104.4 277 36.1
MSTRG.5621 Avicennia marina HOM05D001128 ORTHO05D000721 2.6e-20 104.0 338 35.5
Gohir.A09G161600 Gossypium hirsutum HOM05D001128 ORTHO05D000721 3.4e-20 103.6 280 40.0
Gorai.006G178800 Gossypium raimondii HOM05D001128 ORTHO05D000721 5.8e-20 102.8 280 37.5
Nitab4.5_0000008g0230 Nicotiana tabacum HOM05D001128 ORTHO05D000721 1.3e-19 101.7 276 34.4
PSO339G4622 Papaver somniferum HOM05D001128 ORTHO05D000721 1.7e-19 101.3 306 35.6
Nn2g13535 Nelumbo nucifera HOM05D001128 ORTHO05D000721 2.9e-19 100.5 333 33.3
Gohir.D09G157200 Gossypium hirsutum HOM05D001128 ORTHO05D000721 3.7e-19 100.1 280 36.8
CANSAT35G1304 Cannabis sativa HOM05D001128 ORTHO05D000721 4.9e-19 99.8 285 33.7
Ciclev10011799m.g Citrus clementina HOM05D001128 ORTHO05D000721 4.9e-19 99.8 287 35.9
Oeu001830.1 Olea europaea HOM05D001128 ORTHO05D000721 6.4e-19 99.4 281 34.5
PSO384G2375 Papaver somniferum HOM05D001128 ORTHO05D000721 6.4e-19 99.4 293 36.2
PGSC0003DMG400011730 Solanum tuberosum HOM05D001128 ORTHO05D000721 6.4e-19 99.4 280 35.7
TWI74G1371 Tripterygium wilfordii HOM05D001128 ORTHO05D000721 6.4e-19 99.4 276 35.5
MD04G1140200 Malus domestica HOM05D001128 ORTHO05D000721 8.3e-19 99.0 286 34.3
Actinidia29161 Actinidia chinensis HOM05D001128 ORTHO05D000721 2.4e-18 97.4 292 34.9
GSVIVG01034054001 Vitis vinifera HOM05D001128 ORTHO05D000721 3.2e-18 97.1 280 37.9
SalBow1G2079 Salvia bowleyana HOM05D001128 ORTHO05D000721 4.1e-18 96.7 303 36.6
Sopen09g006510 Solanum pennellii HOM05D001128 ORTHO05D000721 4.1e-18 96.7 285 35.1
Lj3C959G13 Lonicera japonica HOM05D001128 ORTHO05D000721 5.4e-18 96.3 294 35.0
Lsat_1_v5_gn_8_80861 Lactuca sativa HOM05D001128 ORTHO05D000721 7.1e-18 95.9 281 37.0
TAR636G2726 Trochodendron aralioides HOM05D001128 ORTHO05D000721 7.1e-18 95.9 278 34.5
Solyc09g011690.4 Solanum lycopersicum HOM05D001128 ORTHO05D000721 9.2e-18 95.5 289 35.6
CiPaw.10G150200 Carya illinoinensis HOM05D001128 ORTHO05D000721 1.2e-17 95.1 287 40.1
HPP92_018175 Vanilla planifolia HOM05D001128 ORTHO05D000721 1.2e-17 95.1 312 32.4
TWI77G0372 Tripterygium wilfordii HOM05D001128 ORTHO05D000721 1.6e-17 94.7 282 37.2
CSS0004370 Camellia sinensis var. sinensis HOM05D001128 ORTHO05D000721 2.7e-17 94.0 283 35.7
Gorai.007G377500 Gossypium raimondii HOM05D001128 ORTHO05D000721 3.5e-17 93.6 305 34.4
Potri.010G195800 Populus trichocarpa HOM05D001128 ORTHO05D000721 6.0e-17 92.8 295 34.9
Gohir.D04G126000 Gossypium hirsutum HOM05D001128 ORTHO05D000721 7.8e-17 92.4 284 36.6
HPP92_018162 Vanilla planifolia HOM05D001128 ORTHO05D000721 1.0e-16 92.0 306 32.4
Cfa017294 Carpinus fangiana HOM05D001128 ORTHO05D000721 1.7e-16 91.3 297 38.7
Gohir.D11G347100 Gossypium hirsutum HOM05D001128 ORTHO05D000721 1.7e-16 91.3 305 34.1
Rhsim05G0200600 Rhododendron simsii HOM05D001128 ORTHO05D000721 1.7e-16 91.3 288 36.8
MSTRG.19049 Avicennia marina HOM05D001128 ORTHO05D000721 2.3e-16 90.9 307 33.2
Gorai.012G109000 Gossypium raimondii HOM05D001128 ORTHO05D000721 2.3e-16 90.9 284 35.6
CSS0047983 Camellia sinensis var. sinensis HOM05D001128 ORTHO05D000721 3.0e-16 90.5 320 34.7
Duzib106G0325 Durio zibethinus HOM05D001128 ORTHO05D000721 3.0e-16 90.5 284 35.6
Gohir.A04G086100 Gossypium hirsutum HOM05D001128 ORTHO05D000721 3.0e-16 90.5 284 36.3
Migut.J00260 Erythranthe guttata HOM05D001128 ORTHO05D000721 3.9e-16 90.1 326 34.0
Manes.09G099100 Manihot esculenta HOM05D001128 ORTHO05D000721 5.1e-16 89.7 282 37.9
Nitab4.5_0000119g0370 Nicotiana tabacum HOM05D001128 ORTHO05D000721 5.1e-16 89.7 271 33.9
Peaxi162Scf00132g00911 Petunia axillaris HOM05D001128 ORTHO05D000721 8.6e-16 89.0 346 32.1
Sabra10G0150300 Salix brachista HOM05D001128 ORTHO05D000721 1.1e-15 88.6 290 34.5
vmacro20201 Vaccinium macrocarpon HOM05D001128 ORTHO05D000721 1.1e-15 88.6 279 35.5
MD12G1155400 Malus domestica HOM05D001128 ORTHO05D000721 1.5e-15 88.2 293 33.8
Nitab4.5_0000652g0060 Nicotiana tabacum HOM05D001128 ORTHO05D000721 1.9e-15 87.8 266 33.8
HPP92_015345 Vanilla planifolia HOM05D001128 ORTHO05D000721 3.3e-15 87.0 306 31.0
Nitab4.5_0002823g0030 Nicotiana tabacum HOM05D001128 ORTHO05D000721 5.6e-15 86.3 266 34.2
Potri.006G093000 Populus trichocarpa HOM05D001128 ORTHO05D000721 7.3e-15 85.9 293 36.5
Aqoxy1G00786 Aquilegia oxysepala HOM05D001128 ORTHO05D000721 9.5e-15 85.5 294 33.0
DCAR_028803 Daucus carota HOM05D001128 ORTHO05D000721 9.5e-15 85.5 320 31.9
Atru.chr8.2106 Acer truncatum HOM05D001128 ORTHO05D000721 1.2e-14 85.1 302 37.4
Phvul.008G113400 Phaseolus vulgaris HOM05D001128 ORTHO05D000721 1.6e-14 84.7 295 33.9
VMungo1383G1773 Vigna mungo HOM05D001128 ORTHO05D000721 1.6e-14 84.7 280 36.1
FAN06G3577 Fragaria x ananassa HOM05D001128 ORTHO05D000721 2.1e-14 84.3 281 34.5
HanXRQChr06g0176291 Helianthus annuus HOM05D001128 ORTHO05D000721 2.8e-14 84.0 277 33.6
ECA236G1029 Erigeron canadensis HOM05D001128 ORTHO05D000131 3.6e-14 83.6 318 30.5
FvH4_7g23630 Fragaria vesca HOM05D001128 ORTHO05D000721 3.6e-14 83.6 281 34.2
CiPaw.09G202700 Carya illinoinensis HOM05D001128 ORTHO05D000721 6.2e-14 82.8 222 36.9
Manes.07G123000 Manihot esculenta HOM05D001128 ORTHO05D000721 8.1e-14 82.4 298 34.9
Sabra16G0104100 Salix brachista HOM05D001128 ORTHO05D000721 8.1e-14 82.4 292 36.6
Cpa.g.sc19.247 Carica papaya HOM05D001128 ORTHO05D000721 1.1e-13 82.0 275 34.2
Haze_20899 Corylus avellana HOM05D001128 ORTHO05D000721 1.4e-13 81.6 294 37.8
Sabra08G0045800 Salix brachista HOM05D001128 ORTHO05D000721 1.4e-13 81.6 273 35.2
HPP92_026966 Vanilla planifolia HOM05D001128 ORTHO05D000721 1.4e-13 81.6 306 30.7
Actinidia02898 Actinidia chinensis HOM05D001128 ORTHO05D000721 1.8e-13 81.3 297 38.0
FAN06G2816 Fragaria x ananassa HOM05D001128 ORTHO05D000721 1.8e-13 81.3 281 33.8
Manes.10G020800 Manihot esculenta HOM05D001128 ORTHO05D000721 2.3e-13 80.9 302 33.4
FAN01G1897 Fragaria x ananassa HOM05D001128 ORTHO05D000721 3.1e-13 80.5 281 33.8
FAN10G3504 Fragaria x ananassa HOM05D001128 ORTHO05D000721 3.1e-13 80.5 281 34.2
Duzib128G0075 Durio zibethinus HOM05D001128 ORTHO05D000721 4.0e-13 80.1 286 32.5
HanXRQChr10g0292031 Helianthus annuus HOM05D001128 ORTHO05D000721 4.0e-13 80.1 302 31.5
SGA_v2.0_scaffold94G28557 Striga asiatica HOM05D001128 ORTHO05D000721 5.2e-13 79.7 268 32.1
Lj1g0009897 Lotus japonicus HOM05D001128 ORTHO05D000721 8.9e-13 79.0 249 32.9
TAR633G0212 Trochodendron aralioides HOM05D001128 ORTHO05D000721 8.9e-13 79.0 283 33.9
MD07G1207900 Malus domestica HOM05D001128 ORTHO05D000721 1.2e-12 78.6 295 35.6
CsaV3_4G025740 Cucumis sativus L. HOM05D001128 ORTHO05D000721 2.0e-12 77.8 287 33.8
Prupe.2G243200 Prunus persica HOM05D001128 ORTHO05D000721 2.0e-12 77.8 290 34.8
Solyc10g084970.2 Solanum lycopersicum HOM05D001128 ORTHO05D000721 2.0e-12 77.8 285 37.9
Hma1.2p1_0671F.1_g200660 Hydrangea macrophylla HOM05D001128 ORTHO05D000721 2.6e-12 77.4 290 37.2
Hma1.2p1_1521F.1_g288670 Hydrangea macrophylla HOM05D001128 ORTHO05D000721 2.6e-12 77.4 286 31.5
RcHm_v2.0_Chr1g0368901 Rosa chinensis HOM05D001128 ORTHO05D000721 2.6e-12 77.4 295 33.9
Haze_17155 Corylus avellana HOM05D001128 ORTHO05D000721 3.4e-12 77.0 304 32.9
FAN03G2145 Fragaria x ananassa HOM05D001128 ORTHO05D000721 3.4e-12 77.0 281 34.5
Thecc.10G030500 Theobroma cacao HOM05D001128 ORTHO05D000721 3.4e-12 77.0 279 36.9
PGSC0003DMG400011013 Solanum tuberosum HOM05D001128 ORTHO05D000721 5.8e-12 76.3 278 36.0
COL.COLO4_25581 Corchorus olitorius HOM05D001128 ORTHO05D000721 7.6e-12 75.9 293 34.8
Oeu018335.1 Olea europaea HOM05D001128 ORTHO05D000721 9.9e-12 75.5 276 33.0
Potri.008G062200 Populus trichocarpa HOM05D001128 ORTHO05D000721 9.9e-12 75.5 280 33.2
Potri.016G105000 Populus trichocarpa HOM05D001128 ORTHO05D000721 9.9e-12 75.5 296 35.8
PGR004G1424 Punica granatum HOM05D001128 ORTHO05D000721 9.9e-12 75.5 273 33.3
FAN09G1692 Fragaria x ananassa HOM05D001128 ORTHO05D000721 1.3e-11 75.1 270 35.2
Glyma.18G191000 Glycine max HOM05D001128 ORTHO05D000721 1.3e-11 75.1 339 32.4
PGSC0003DMG400019191 Solanum tuberosum HOM05D001128 ORTHO05D000721 1.3e-11 75.1 321 30.8
MELO3C003199.2 Cucumis melo HOM05D001128 ORTHO05D000721 1.7e-11 74.7 281 33.8
SalBow4G0348 Salvia bowleyana HOM05D001128 ORTHO05D000721 1.7e-11 74.7 297 32.7
Sed0002927 Sechium edule HOM05D001128 ORTHO05D000721 1.7e-11 74.7 324 31.5
Cfa001394 Carpinus fangiana HOM05D001128 ORTHO05D000721 2.2e-11 74.3 304 32.6
Gohir.A11G328200 Gossypium hirsutum HOM05D001128 ORTHO05D000721 2.2e-11 74.3 304 33.6
MD01G1142200 Malus domestica HOM05D001128 ORTHO05D000721 2.2e-11 74.3 281 33.5
Migut.L01977 Erythranthe guttata HOM05D001128 ORTHO05D000721 2.9e-11 73.9 269 31.2
FvH4_6g12650 Fragaria vesca HOM05D001128 ORTHO05D000721 2.9e-11 73.9 269 35.3
Oeu013161.1 Olea europaea HOM05D001128 ORTHO05D000721 2.9e-11 73.9 329 30.4
RcHm_v2.0_Chr3g0464501 Rosa chinensis HOM05D001128 ORTHO05D000721 2.9e-11 73.9 276 34.4
THA.LOC104823397 Tarenaya hassleriana HOM05D001128 ORTHO05D000721 2.9e-11 73.9 284 33.5
TWI09G0818 Tripterygium wilfordii HOM05D001128 ORTHO05D000721 3.8e-11 73.6 282 31.9
Oeu009915.1 Olea europaea HOM05D001128 ORTHO05D000721 4.9e-11 73.2 274 30.7
Lsat_1_v5_gn_9_31700 Lactuca sativa HOM05D001128 ORTHO05D000721 6.4e-11 72.8 327 31.5
ClCG04G007510 Citrullus lanatus HOM05D001128 ORTHO05D000721 8.4e-11 72.4 352 29.8
FAN14G3619 Fragaria x ananassa HOM05D001128 ORTHO05D000721 8.4e-11 72.4 270 35.2
CiPaw.01G293700 Carya illinoinensis HOM05D001128 ORTHO05D000721 1.1e-10 72.0 285 32.3
LjContig00047_ERROPOS266959g0024685 Lotus japonicus HOM05D001128 ORTHO05D000721 1.4e-10 71.6 324 30.2
FAN05G2922 Fragaria x ananassa HOM05D001128 ORTHO05D000721 2.4e-10 70.9 270 35.2
TAR369G0849 Trochodendron aralioides HOM05D001128 ORTHO05D000721 2.4e-10 70.9 288 31.9
MELO3C009213.2 Cucumis melo HOM05D001128 ORTHO05D000721 4.1e-10 70.1 271 32.8
ClCG10G021590 Citrullus lanatus HOM05D001128 ORTHO05D000721 5.4e-10 69.7 270 31.5
Gohir.D10G238700 Gossypium hirsutum HOM05D001128 ORTHO05D000721 5.4e-10 69.7 285 33.7
arahy.Tifrunner.gnm1.ann1.KBQI3L Arachis hypogaea HOM05D001128 ORTHO05D000721 9.2e-10 68.9 237 34.2
Duzib093G0147 Durio zibethinus HOM05D001128 ORTHO05D000721 1.2e-09 68.6 284 32.0
vmacro07011 Vaccinium macrocarpon HOM05D001128 ORTHO05D000721 1.2e-09 68.6 276 33.7
arahy.Tifrunner.gnm1.ann1.463IUL Arachis hypogaea HOM05D001128 ORTHO05D000721 1.6e-09 68.2 238 33.6
Dinv16282 Davidia involucrata HOM05D001128 ORTHO05D000721 1.6e-09 68.2 291 31.6
Duzib128G2050 Durio zibethinus HOM05D001128 ORTHO05D000721 2.1e-09 67.8 294 34.4
Sopen10g034430 Solanum pennellii HOM05D001128 ORTHO05D000721 2.1e-09 67.8 286 36.4
CSS0030928 Camellia sinensis var. sinensis HOM05D001128 ORTHO05D000721 2.7e-09 67.4 285 31.6
Ciclev10031729m.g Citrus clementina HOM05D001128 ORTHO05D000721 2.7e-09 67.4 283 31.1
Gorai.011G274600 Gossypium raimondii HOM05D001128 ORTHO05D000721 2.7e-09 67.4 285 33.3
Glyma.07G141000 Glycine max HOM05D001128 ORTHO05D000721 4.6e-09 66.6 333 31.2
CsaV3_3G034430 Cucumis sativus L. HOM05D001128 ORTHO05D000721 6.0e-09 66.2 273 31.1
Dinv34448 Davidia involucrata HOM05D001128 ORTHO05D000721 6.0e-09 66.2 276 34.4
FAN02G4298 Fragaria x ananassa HOM05D001128 ORTHO05D000721 6.0e-09 66.2 269 34.6
Ca_07581_v3 Cicer arietinum L. HOM05D001128 ORTHO05D000721 7.8e-09 65.9 275 33.8
Ca_17132_v3 Cicer arietinum L. HOM05D001128 ORTHO05D000721 7.8e-09 65.9 273 28.9
Dinv35538 Davidia involucrata HOM05D001128 ORTHO05D000721 7.8e-09 65.9 137 37.2
TWI53G0706 Tripterygium wilfordii HOM05D001128 ORTHO05D000721 7.8e-09 65.9 293 32.1
CiPaw.02G188400 Carya illinoinensis HOM05D001128 ORTHO05D000721 1.7e-08 64.7 289 32.5
TPR.G13630 Trifolium pratense HOM05D001128 ORTHO05D000721 1.7e-08 64.7 298 31.2
CSS0014150 Camellia sinensis var. sinensis HOM05D001128 ORTHO05D000721 3.0e-08 63.9 47 63.8
Gohir.A10G226400 Gossypium hirsutum HOM05D001128 ORTHO05D000721 3.0e-08 63.9 285 33.0
HanXRQChr04g0124601 Helianthus annuus HOM05D001128 ORTHO05D000721 3.0e-08 63.9 230 33.9
Lj6g0007644 Lotus japonicus HOM05D001128 ORTHO05D000721 8.6e-08 62.4 279 30.8
CANSAT56G3374 Cannabis sativa HOM05D001128 ORTHO05D000721 1.1e-07 62.0 312 30.8
Sed0012315 Sechium edule HOM05D001128 ORTHO05D000721 1.1e-07 62.0 270 29.3
GSVIVG01016431001 Vitis vinifera HOM05D001128 ORTHO05D000721 1.1e-07 62.0 165 38.2
Lalb_Chr03g0042761 Lupinus albus HOM05D001128 ORTHO05D000721 1.5e-07 61.6 349 27.5
THA.LOC104810062 Tarenaya hassleriana HOM05D001128 ORTHO05D000721 1.5e-07 61.6 295 32.5
arahy.Tifrunner.gnm1.ann1.U326PE Arachis hypogaea HOM05D001128 ORTHO05D000721 1.9e-07 61.2 289 31.1
Nitab4.5_0002822g0050 Nicotiana tabacum HOM05D001128 ORTHO05D000721 1.9e-07 61.2 283 32.9
GSVIVG01024844001 Vitis vinifera HOM05D001128 ORTHO05D000721 2.5e-07 60.8 272 29.8
arahy.Tifrunner.gnm1.ann1.1NAQ44 Arachis hypogaea HOM05D001128 ORTHO05D000721 3.3e-07 60.5 287 32.4
MSTRG.10240 Avicennia marina HOM05D001128 ORTHO05D000721 7.3e-07 59.3 273 33.7
CSS0013156 Camellia sinensis var. sinensis HOM05D001128 ORTHO05D000721 7.3e-07 59.3 287 31.4
Sed0025256 Sechium edule HOM05D001128 ORTHO05D000721 7.3e-07 59.3 273 28.6
SEGI_15940 Sequoiadendron giganteum HOM05D001128 ORTHO05D000721 7.3e-07 59.3 291 28.2
Hma1.2p1_0026F.1_g016650 Hydrangea macrophylla HOM05D001128 ORTHO05D000721 1.6e-06 58.2 304 33.6
Rhsim03G0138400 Rhododendron simsii HOM05D001128 ORTHO05D000721 1.6e-06 58.2 280 33.2
Glyma.18G031800 Glycine max HOM05D001128 ORTHO05D000721 2.1e-06 57.8 291 29.2
THA.LOC104806538 Tarenaya hassleriana HOM05D001128 ORTHO05D000721 2.1e-06 57.8 287 30.7
THA.LOC104809429 Tarenaya hassleriana HOM05D001128 ORTHO05D000721 2.8e-06 57.4 286 29.0
Glyma.02G252700 Glycine max HOM05D001128 ORTHO05D000721 4.7e-06 56.6 294 31.6
Sc07g0006950 Simmondsia chinensis HOM05D001128 ORTHO05D000721 6.2e-06 56.2 297 29.3
Psat0s1845g0240 Pisum sativum HOM05D001128 ORTHO05D000721 8.1e-06 55.8 312 29.5
QL08p062120 Quercus lobata HOM05D001128 ORTHO05D000721 8.1e-06 55.8 296 30.7
Hund12841 Selenicereus undatus HOM05D001128 ORTHO05D000721 8.1e-06 55.8 301 28.9


User provided reference genes

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