Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb103780 Zea mays HOM05D008064 ORTHO05D000045 2.0e-48 195.3 87 100.0
Zm00001eb282170 Zea mays HOM05D008064 ORTHO05D000045 2.0e-48 195.3 87 100.0
Zm00001eb286510 Zea mays HOM05D008064 ORTHO05D000045 2.0e-48 195.3 87 100.0
Zm00001eb101600 Zea mays HOM05D008064 ORTHO05D000045 1.7e-47 192.2 87 98.9
Zm00001eb241460 Zea mays HOM05D008064 ORTHO05D000045 1.7e-47 192.2 87 98.9
Zm00001eb137660 Zea mays HOM05D008064 ORTHO05D000045 9.2e-46 186.4 87 95.4
Zm00001eb245660 Zea mays HOM05D002425 ORTHO05D002709 9.2e-46 186.4 87 95.4
Zm00001eb337580 Zea mays HOM05D008064 ORTHO05D000045 9.2e-46 186.4 87 95.4
Zm00001eb399410 Zea mays HOM05D008064 ORTHO05D000045 9.2e-46 186.4 87 95.4
Zm00001eb175090 Zea mays HOM05D008064 ORTHO05D000045 2.7e-45 184.9 87 94.3
Zm00001eb381320 Zea mays HOM05D008064 ORTHO05D000045 7.8e-45 183.3 87 92.0
Zm00001eb340930 Zea mays HOM05D008064 ORTHO05D000045 1.7e-44 182.2 87 90.8
Zm00001eb138170 Zea mays HOM05D008064 ORTHO05D000045 2.3e-44 181.8 87 93.1
Zm00001eb185320 Zea mays HOM05D008270 ORTHO05D010684 1.1e-43 179.5 87 92.0
Zm00001eb265920 Zea mays HOM05D000096 ORTHO05D000045 1.6e-42 175.6 87 89.7
Zm00001eb385560 Zea mays HOM05D008064 ORTHO05D000045 6.6e-36 153.7 87 77.0
Zm00001eb036820 Zea mays HOM05D008064 ORTHO05D000045 4.3e-35 151.0 71 91.5
Zm00001eb109080 Zea mays HOM05D008064 ORTHO05D000045 4.3e-35 151.0 71 91.5
Zm00001eb238490 Zea mays HOM05D008064 ORTHO05D000045 4.3e-35 151.0 71 91.5
Zm00001eb324940 Zea mays HOM05D008064 ORTHO05D000045 4.3e-35 151.0 71 91.5
Zm00001eb372170 Zea mays HOM05D008064 ORTHO05D000045 4.3e-35 151.0 71 91.5
Zm00001eb373410 Zea mays HOM05D008064 ORTHO05D000045 5.1e-28 127.5 82 68.3
Zm00001eb129720 Zea mays HOM05D008064 ORTHO05D000045 1.9e-27 125.6 67 80.6
CAN.G205.1 Capsicum annuum HOM05D000096 ORTHO05D000045 3.2e-14 81.6 70 50.0
Zm00001eb340200 Zea mays HOM05D008270 ORTHO05D000045 7.1e-14 80.5 39 87.2
SGA_v2.0_scaffold131G34426 Striga asiatica HOM05D000096 ORTHO05D010595 2.7e-13 78.6 82 45.1
PGSC0003DMG400006247 Solanum tuberosum HOM05D011468 ORTHO05D012657 1.3e-12 76.3 70 45.7
PGSC0003DMG400016517 Solanum tuberosum HOM05D018632 ORTHO05D018880 1.3e-12 76.3 71 47.9
Dinv14086 Davidia involucrata HOM05D000096 ORTHO05D000045 1.7e-12 75.9 77 45.5
ECA240G0844 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.3e-12 75.5 82 43.9
SGA_v2.0_scaffold183G39859 Striga asiatica HOM05D000096 ORTHO05D000045 3.9e-12 74.7 62 53.2
EL10Ac4g07888 Beta vulgaris HOM05D003315 ORTHO05D003407 1.1e-11 73.2 72 50.0
EL10Ac4g09359 Beta vulgaris HOM05D000096 ORTHO05D000045 1.5e-11 72.8 72 50.0
Cc01_g04040 Coffea canephora HOM05D000096 ORTHO05D000045 1.5e-11 72.8 76 43.4
SGA_v2.0_scaffold73G24447 Striga asiatica HOM05D001218 ORTHO05D004088 1.9e-11 72.4 69 49.3
Nn4g25156 Nelumbo nucifera HOM05D000096 ORTHO05D000045 2.5e-11 72.0 85 43.5
Rhsim02G0156100 Rhododendron simsii HOM05D000096 ORTHO05D000045 3.3e-11 71.6 83 41.0
EL10Ac5g10500 Beta vulgaris HOM05D000096 ORTHO05D000045 5.6e-11 70.9 72 47.2
EL10Ac6g13732 Beta vulgaris HOM05D000096 ORTHO05D000045 5.6e-11 70.9 70 47.1
EL10Ac8g19574 Beta vulgaris HOM05D000096 ORTHO05D000045 5.6e-11 70.9 70 47.1
EL10Ac8g20587 Beta vulgaris HOM05D000096 ORTHO05D000045 5.6e-11 70.9 70 47.1
Peaxi162Scf00371g00316 Petunia axillaris HOM05D002261 ORTHO05D000045 5.6e-11 70.9 62 48.4
ECA246G4273 Erigeron canadensis HOM05D000096 ORTHO05D000045 7.3e-11 70.5 81 40.7
FvH4_3g36631 Fragaria vesca HOM05D000096 ORTHO05D000045 7.3e-11 70.5 79 41.8
SGA_v2.0_scaffold30G12441 Striga asiatica HOM05D000096 ORTHO05D000045 9.6e-11 70.1 87 42.5
EL10Ac1g01110 Beta vulgaris HOM05D000096 ORTHO05D000045 1.6e-10 69.3 72 47.2
EL10Ac7g18199 Beta vulgaris HOM05D000096 ORTHO05D000045 2.1e-10 68.9 72 47.2
SGA_v2.0_scaffold75G24967 Striga asiatica HOM05D018457 ORTHO05D000045 2.1e-10 68.9 87 42.5
EL10Ac5g11733 Beta vulgaris HOM05D000096 ORTHO05D000045 2.8e-10 68.6 75 45.3
PSO357G0164 Papaver somniferum HOM05D000096 ORTHO05D000045 2.8e-10 68.6 82 39.0
ECA233G5367 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.6e-10 68.2 81 40.7
EL10Ac7g16756 Beta vulgaris HOM05D000096 ORTHO05D000045 4.8e-10 67.8 72 45.8
SGA_v2.0_scaffold511G52630 Striga asiatica HOM05D000096 ORTHO05D000045 6.2e-10 67.4 80 46.2
ECA233G0447 Erigeron canadensis HOM05D000096 ORTHO05D000045 8.1e-10 67.0 75 41.3
EL10Ac7g17443 Beta vulgaris HOM05D007854 ORTHO05D000045 1.1e-09 66.6 64 46.9
EL10As14g24092 Beta vulgaris HOM05D007854 ORTHO05D010168 1.1e-09 66.6 65 50.8
PSO832G3507 Papaver somniferum HOM05D000096 ORTHO05D000045 1.1e-09 66.6 74 44.6
Hma1.2p1_0115F.1_g055970 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 1.4e-09 66.2 81 40.7
EL10Ac1g02149 Beta vulgaris HOM05D000096 ORTHO05D000045 1.8e-09 65.9 78 42.3
EL10Ac5g12706 Beta vulgaris HOM05D000096 ORTHO05D000045 2.4e-09 65.5 72 44.4
CAN.G265.7 Capsicum annuum HOM05D000096 ORTHO05D000045 2.4e-09 65.5 76 43.4
CANSAT01G2838 Cannabis sativa HOM05D000096 ORTHO05D000045 3.1e-09 65.1 70 41.4
CANSAT80G1195 Cannabis sativa HOM05D000096 ORTHO05D000045 5.3e-09 64.3 69 42.0
vmacro07726 Vaccinium macrocarpon HOM05D005445 ORTHO05D007043 5.3e-09 64.3 76 43.4
vmacro10242 Vaccinium macrocarpon HOM05D002150 ORTHO05D002191 5.3e-09 64.3 76 43.4
Cc02_g03810 Coffea canephora HOM05D000096 ORTHO05D000045 6.9e-09 63.9 70 42.9
RcHm_v2.0_Chr5g0013161 Rosa chinensis HOM05D000096 ORTHO05D000045 1.5e-08 62.8 86 36.0
CANSAT78G0229 Cannabis sativa HOM05D000096 ORTHO05D000045 2.0e-08 62.4 69 40.6
ECA246G2596 Erigeron canadensis HOM05D000096 ORTHO05D000045 5.8e-08 60.8 81 35.8
EL10Ac2g03134 Beta vulgaris HOM05D000096 ORTHO05D000045 7.6e-08 60.5 68 42.6
FvH4_5g25551 Fragaria vesca HOM05D000096 ORTHO05D000045 9.9e-08 60.1 70 34.3
PSO063G0288 Papaver somniferum HOM05D000096 ORTHO05D000045 9.9e-08 60.1 74 36.5
PSO063G4809 Papaver somniferum HOM05D000096 ORTHO05D000045 9.9e-08 60.1 74 36.5
QL04p091343 Quercus lobata HOM05D000096 ORTHO05D000045 9.9e-08 60.1 78 37.2
EL10Ac2g03227 Beta vulgaris HOM05D000096 ORTHO05D000045 3.8e-07 58.2 70 38.6
Phvul.008G074400 Phaseolus vulgaris HOM05D000096 ORTHO05D000045 4.9e-07 57.8 69 40.6
Cc02_g03220 Coffea canephora HOM05D000096 ORTHO05D000045 6.4e-07 57.4 65 40.0
PSO210G0169 Papaver somniferum HOM05D000096 ORTHO05D000045 8.4e-07 57.0 70 41.4
EL10Ac6g15055 Beta vulgaris HOM05D000096 ORTHO05D000045 1.1e-06 56.6 70 40.0
SGA_v2.0_scaffold10G05328 Striga asiatica HOM05D006612 ORTHO05D009014 1.4e-06 56.2 86 37.2
Aqoxy6G02750 Aquilegia oxysepala HOM05D000096 ORTHO05D000045 1.9e-06 55.8 69 39.1
TPR.G18330 Trifolium pratense HOM05D000096 ORTHO05D000045 1.9e-06 55.8 69 42.0
EL10Ac4g07894 Beta vulgaris HOM05D000096 ORTHO05D000045 2.4e-06 55.5 57 47.4
EL10Ac6g14190 Beta vulgaris HOM05D000096 ORTHO05D000045 4.2e-06 54.7 78 41.0
BolC7t45259H Brassica oleracea HOM05D000096 ORTHO05D009779 4.2e-06 54.7 62 46.8
Oeu007626.1 Olea europaea HOM05D000096 ORTHO05D000045 4.2e-06 54.7 71 40.8
Medtr0003s0430 Medicago truncatula HOM05D000096 ORTHO05D020878 7.1e-06 53.9 78 35.9
COL.COLO4_04313 Corchorus olitorius HOM05D000096 ORTHO05D000045 9.3e-06 53.5 63 39.7


User provided reference genes

Program Settings