Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb280030 Zea mays HOM05D004843 ORTHO05D005833 0.0e+00 1335.9 674 100.0
Os06g0244100 Oryza sativa ssp. japonica HOM05D004843 ORTHO05D005833 7.0e-210 734.6 677 60.4
TAR627G0485 Trochodendron aralioides HOM05D004843 ORTHO05D005833 9.2e-85 318.9 565 36.5
HPP92_010831 Vanilla planifolia HOM05D004843 ORTHO05D005833 8.0e-81 305.8 476 37.8
Aqoxy4G00544 Aquilegia oxysepala HOM05D004843 ORTHO05D005833 7.0e-77 292.7 558 33.3
Dinv20222 Davidia involucrata HOM05D004843 ORTHO05D005833 1.1e-74 285.4 528 34.7
Nn1g06340 Nelumbo nucifera HOM05D004843 ORTHO05D005833 5.6e-74 283.1 574 34.0
CAN.G765.5 Capsicum annuum HOM05D004843 ORTHO05D005833 3.6e-73 280.4 544 34.0
TWI38G0787 Tripterygium wilfordii HOM05D004843 ORTHO05D005833 3.4e-71 273.9 574 32.2
Lj1C835G2 Lonicera japonica HOM05D004843 ORTHO05D005833 5.8e-71 273.1 586 33.1
Oeu024378.1 Olea europaea HOM05D004843 ORTHO05D005833 7.5e-71 272.7 569 33.6
Solyc12g014090.2 Solanum lycopersicum HOM05D004843 ORTHO05D005833 9.8e-71 272.3 546 33.5
Sopen12g005870 Solanum pennellii HOM05D004843 ORTHO05D005833 9.8e-71 272.3 546 33.7
Actinidia35229 Actinidia chinensis HOM05D004843 ORTHO05D005833 1.3e-70 271.9 573 34.0
Gohir.A04G036900 Gossypium hirsutum HOM05D004843 ORTHO05D005833 1.7e-70 271.6 572 32.9
Cfa019615 Carpinus fangiana HOM05D004843 ORTHO05D005833 6.4e-70 269.6 579 32.8
Hma1.2p1_0416F.1_g148560 Hydrangea macrophylla HOM05D004843 ORTHO05D005833 8.3e-70 269.2 585 33.3
VMungo1080G1831 Vigna mungo HOM05D004843 ORTHO05D005833 1.1e-69 268.9 588 32.1
Nitab4.5_0007508g0020 Nicotiana tabacum HOM05D004843 ORTHO05D005833 2.4e-69 267.7 574 32.9
HPP92_010833 Vanilla planifolia HOM05D004843 ORTHO05D005833 7.1e-69 266.2 389 38.8
CiPaw.08G115600 Carya illinoinensis HOM05D004843 ORTHO05D005833 2.7e-68 264.2 566 32.9
GSVIVG01014249001 Vitis vinifera HOM05D004843 ORTHO05D005833 3.5e-68 263.8 551 33.8
Lsat_1_v5_gn_5_128660 Lactuca sativa HOM05D004843 ORTHO05D005833 6.0e-68 263.1 594 31.6
Gorai.009G374700 Gossypium raimondii HOM05D004843 ORTHO05D005833 1.7e-67 261.5 572 32.9
Glyma.12G227600 Glycine max HOM05D004843 ORTHO05D005833 2.3e-67 261.2 587 32.5
Glyma.13G272600 Glycine max HOM05D004843 ORTHO05D005833 2.3e-67 261.2 587 32.0
Oeu061997.2 Olea europaea HOM05D004843 ORTHO05D005833 3.9e-67 260.4 554 33.8
Duzib268G0207 Durio zibethinus HOM05D004843 ORTHO05D005833 6.6e-67 259.6 569 31.8
MD03G1237200 Malus domestica HOM05D004843 ORTHO05D005833 6.6e-67 259.6 565 33.8
Gohir.D05G347266 Gossypium hirsutum HOM05D004843 ORTHO05D005833 1.9e-66 258.1 572 32.3
QL11p026708 Quercus lobata HOM05D004843 ORTHO05D005833 5.6e-66 256.5 632 30.9
ATR0165G025 Amborella trichopoda HOM05D004843 ORTHO05D005833 9.5e-66 255.8 577 34.0
Phvul.005G067200 Phaseolus vulgaris HOM05D004843 ORTHO05D005833 9.5e-66 255.8 588 31.5
CSS0025192 Camellia sinensis var. sinensis HOM05D004843 ORTHO05D005833 1.6e-65 255.0 584 30.3
MELO3C016086.2 Cucumis melo HOM05D004843 ORTHO05D005833 2.1e-65 254.6 577 32.2
PGR031G2553 Punica granatum HOM05D004843 ORTHO05D005833 2.1e-65 254.6 705 30.6
Prupe.4G172200 Prunus persica HOM05D004843 ORTHO05D005833 4.7e-65 253.4 578 31.7
Cc05_g11520 Coffea canephora HOM05D004843 ORTHO05D005833 6.2e-65 253.1 575 32.0
Cpa.g.sc131.81 Carica papaya HOM05D004843 ORTHO05D005833 8.1e-65 252.7 602 31.4
MD10G1064700 Malus domestica HOM05D004843 ORTHO05D005833 8.1e-65 252.7 566 32.9
Eucgr.F03287 Eucalyptus grandis HOM05D004843 ORTHO05D005833 1.8e-64 251.5 570 33.2
Lj3g0014260 Lotus japonicus HOM05D004843 ORTHO05D005833 4.0e-64 250.4 582 32.1
RcHm_v2.0_Chr6g0312691 Rosa chinensis HOM05D004843 ORTHO05D005833 6.8e-64 249.6 585 31.3
Ciclev10019192m.g Citrus clementina HOM05D004843 ORTHO05D005833 8.9e-64 249.2 605 28.1
AUR62036128 Chenopodium quinoa HOM05D004843 ORTHO05D005833 2.6e-63 247.7 577 32.4
CsaV3_4G008440 Cucumis sativus L. HOM05D004843 ORTHO05D005833 3.4e-63 247.3 572 32.2
Sed0025158 Sechium edule HOM05D004843 ORTHO05D005833 4.4e-63 246.9 540 32.2
FAN25G1696 Fragaria x ananassa HOM05D004843 ORTHO05D005833 5.8e-63 246.5 592 32.9
DCAR_021007 Daucus carota HOM05D004843 ORTHO05D005833 7.6e-63 246.1 554 33.2
Oeu061325.2 Olea europaea HOM05D004843 ORTHO05D005833 1.3e-62 245.4 493 34.3
FvH4_3g19060 Fragaria vesca HOM05D004843 ORTHO05D005833 2.9e-62 244.2 625 31.4
Lj1g0026777 Lotus japonicus HOM05D004843 ORTHO05D005833 3.7e-62 243.8 599 30.6
Manes.15G090500 Manihot esculenta HOM05D004843 ORTHO05D005833 1.1e-61 242.3 605 31.4
Nitab4.5_0003077g0040 Nicotiana tabacum HOM05D004843 ORTHO05D005833 1.1e-61 242.3 569 31.5
RcHm_v2.0_Chr5g0031851 Rosa chinensis HOM05D004843 ORTHO05D005833 1.1e-61 242.3 606 30.9
SGA_v2.0_scaffold70G23704 Striga asiatica HOM05D004843 ORTHO05D005833 5.4e-61 240.0 564 31.6
MSTRG.12883 Avicennia marina HOM05D004843 ORTHO05D005833 2.7e-60 237.7 564 30.3
HanXRQChr10g0302381 Helianthus annuus HOM05D004843 ORTHO05D005833 2.7e-60 237.7 577 31.5
Medtr2g078390 Medicago truncatula HOM05D004843 ORTHO05D005833 3.5e-60 237.3 593 30.4
Psat5g240000 Pisum sativum HOM05D004843 ORTHO05D005833 7.8e-60 236.1 575 30.4
PSO210G0781 Papaver somniferum HOM05D004843 ORTHO05D005833 8.6e-59 232.6 609 31.2
Potri.012G106300 Populus trichocarpa HOM05D004843 ORTHO05D005833 8.6e-59 232.6 589 31.1
PSO832G1805 Papaver somniferum HOM05D004843 ORTHO05D005833 2.5e-58 231.1 594 30.5
EL10Ac4g08285 Beta vulgaris HOM05D004843 ORTHO05D005833 1.2e-57 228.8 553 31.8
Lalb_Chr25g0286141 Lupinus albus HOM05D004843 ORTHO05D005833 1.2e-55 222.2 601 29.8
Sc03g0010280 Simmondsia chinensis HOM05D004843 ORTHO05D005833 3.4e-55 220.7 580 30.2
TPR.G29644 Trifolium pratense HOM05D004843 ORTHO05D005833 6.4e-54 216.5 624 30.3
SalBow7G4166 Salvia bowleyana HOM05D004843 ORTHO05D005833 8.4e-54 216.1 478 32.8
arahy.Tifrunner.gnm1.ann1.60B7R0 Arachis hypogaea HOM05D004843 ORTHO05D005833 3.2e-53 214.2 574 29.8
vmacro09509 Vaccinium macrocarpon HOM05D004843 ORTHO05D005833 4.2e-53 213.8 662 26.9
SEGI_17777 Sequoiadendron giganteum HOM05D004843 ORTHO05D005833 7.1e-53 213.0 545 27.7
Peaxi162Scf00000g02614 Petunia axillaris HOM05D004843 ORTHO05D005833 2.7e-52 211.1 435 33.8
FAN11G0804 Fragaria x ananassa HOM05D004843 ORTHO05D005833 4.6e-52 210.3 625 29.9
AUR62026744 Chenopodium quinoa HOM05D004843 ORTHO05D005833 6.0e-52 209.9 519 30.8
Sabra12G0078800 Salix brachista HOM05D004843 ORTHO05D005833 6.0e-52 209.9 640 28.1
Aqoxy7G02743 Aquilegia oxysepala HOM05D004843 ORTHO05D005833 1.7e-51 208.4 261 40.2
AUR62019511 Chenopodium quinoa HOM05D004843 ORTHO05D005833 3.9e-51 207.2 520 32.1
Glyma.13G009900 Glycine max HOM05D004843 ORTHO05D005833 3.9e-51 207.2 477 31.0
CDE10G0946 Ceratophyllum demersum HOM05D004843 ORTHO05D005833 8.7e-51 206.1 467 31.5
Rhsim04G0023600 Rhododendron simsii HOM05D004843 ORTHO05D005833 2.5e-50 204.5 649 27.3
DCAR_031588 Daucus carota HOM05D004843 ORTHO05D005833 3.3e-50 204.1 528 31.1
ClCG07G009890 Citrullus lanatus HOM05D004843 ORTHO05D005833 4.3e-50 203.8 573 29.3
arahy.Tifrunner.gnm1.ann1.G1PXE9 Arachis hypogaea HOM05D004843 ORTHO05D005833 5.6e-50 203.4 544 30.5
Thecc.07G102200 Theobroma cacao HOM05D004843 ORTHO05D005833 5.6e-50 203.4 277 41.5
MBI02_g30880_MAGBIO Magnolia biondii HOM05D004843 ORTHO05D005833 7.3e-50 203.0 424 34.4
TWI31G0686 Tripterygium wilfordii HOM05D004843 ORTHO05D005833 1.3e-49 202.2 534 29.8
THA.LOC104798752 Tarenaya hassleriana HOM05D004843 ORTHO05D005833 1.8e-48 198.4 566 29.2
CSS0012812 Camellia sinensis var. sinensis HOM05D004843 ORTHO05D005833 1.5e-47 195.3 299 37.8
Migut.H01969 Erythranthe guttata HOM05D004843 ORTHO05D005833 5.8e-47 193.4 576 28.8
Hund13862 Selenicereus undatus HOM05D004843 ORTHO05D005833 9.9e-47 192.6 441 32.0
ECA234G3172 Erigeron canadensis HOM05D004843 ORTHO05D005833 1.7e-46 191.8 289 38.1
CiPaw.11G165700 Carya illinoinensis HOM05D004843 ORTHO05D005833 1.2e-44 185.7 561 30.1
Aa31LG6G6390 Aethionema arabicum HOM05D000944 ORTHO05D003581 1.3e-41 175.6 530 26.0
Haze_09370 Corylus avellana HOM05D004843 ORTHO05D005833 6.2e-41 173.3 395 31.1
unitig_26.g10042 Utricularia gibba HOM05D004843 ORTHO05D005833 1.7e-38 165.2 448 30.1
Phvul.005G068700 Phaseolus vulgaris HOM05D004843 ORTHO05D005833 2.2e-38 164.9 422 30.6
Atru.chr2.138 Acer truncatum HOM05D004843 ORTHO05D005833 4.9e-38 163.7 219 39.7
Thecc.07G102000 Theobroma cacao HOM05D004843 ORTHO05D005833 1.4e-37 162.2 247 38.1
CARHR043430 Cardamine hirsuta HOM05D004843 ORTHO05D005833 2.4e-37 161.4 529 26.5
A05p18490 Brassica napus HOM05D004843 ORTHO05D005833 1.2e-36 159.1 541 26.8
Thhalv10011326m.g Eutrema salsugineum HOM05D004843 ORTHO05D005833 1.2e-36 159.1 571 27.0
SalBow7G4326 Salvia bowleyana HOM05D004843 ORTHO05D005833 2.1e-36 158.3 423 30.5
BraA05t20741Z Brassica rapa HOM05D004843 ORTHO05D005833 6.0e-36 156.8 545 26.8
AT1G53200 Arabidopsis thaliana HOM05D004843 ORTHO05D005833 7.9e-36 156.4 531 25.6
C06p14590 Brassica napus HOM05D004843 ORTHO05D005833 5.1e-35 153.7 547 26.5
Thhalv10028227m.g Eutrema salsugineum HOM05D004843 ORTHO05D005833 5.1e-35 153.7 515 27.8
BcaB02g10938 Brassica carinata HOM05D004843 ORTHO05D005833 6.7e-35 153.3 550 26.4
BcaC08g44060 Brassica carinata HOM05D004843 ORTHO05D005833 1.9e-34 151.8 547 26.5
BolC6t36637H Brassica oleracea HOM05D004843 ORTHO05D005833 1.9e-34 151.8 547 26.5
AL1G61600 Arabidopsis lyrata HOM05D004843 ORTHO05D005833 5.6e-34 150.2 563 25.6
Carub.0001s4239 Capsella rubella HOM05D004843 ORTHO05D005833 1.6e-33 148.7 555 26.8
Sp1g39780 Schrenkiella parvula HOM05D004843 ORTHO05D005833 3.7e-33 147.5 548 26.3
Mapoly0139s0008 Marchantia polymorpha HOM05D004843 ORTHO05D005833 2.4e-32 144.8 569 25.3
Oeu018948.1 Olea europaea HOM05D004843 ORTHO05D005833 1.2e-28 132.5 302 33.8
DCAR_032123 Daucus carota HOM05D004843 ORTHO05D005833 1.6e-28 132.1 186 39.8
Pp3c12_9280 Physcomitrium patens HOM05D004843 ORTHO05D005833 1.6e-28 132.1 561 23.5
Oeu038157.2 Olea europaea HOM05D004843 ORTHO05D005833 1.4e-24 119.0 239 35.1
A06p01130 Brassica napus HOM05D004843 ORTHO05D005833 5.3e-24 117.1 269 32.0
C06p08970 Brassica napus HOM05D004843 ORTHO05D005833 8.4e-22 109.8 229 29.7
BolC6t35976H Brassica oleracea HOM05D004843 ORTHO05D005833 4.2e-21 107.5 239 30.1
AagrBONN_evm.TU.Sc2ySwM_228.3860 Anthoceros agrestis HOM05D004843 ORTHO05D005833 2.1e-20 105.1 445 23.8
BcaC08g43511 Brassica carinata HOM05D004843 ORTHO05D005833 6.7e-19 100.1 298 27.5
Oeu027285.1 Olea europaea HOM05D004843 ORTHO05D005833 1.5e-18 99.0 158 38.6
CAN.G349.3 Capsicum annuum HOM05D004843 ORTHO05D005833 4.3e-18 97.4 243 31.7
Thecc.07G101600 Theobroma cacao HOM05D004843 ORTHO05D005833 4.3e-18 97.4 162 38.3
Thecc.07G101400 Theobroma cacao HOM05D004843 ORTHO05D005833 7.4e-18 96.7 167 37.1
Aa31sc1038G10 Aethionema arabicum HOM05D004843 ORTHO05D005833 6.3e-17 93.6 433 22.4
Ca_15018_v3 Cicer arietinum L. HOM05D004843 ORTHO05D005833 8.2e-17 93.2 387 26.9
AagrBONN_evm.TU.Sc2ySwM_228.3857 Anthoceros agrestis HOM05D004843 ORTHO05D005833 1.4e-16 92.4 446 23.8
BraA06t23340Z Brassica rapa HOM05D004843 ORTHO05D005833 1.7e-14 85.5 170 31.8
HPP92_010834 Vanilla planifolia HOM05D004843 ORTHO05D005833 1.0e-11 76.3 118 37.3
Ca_04025_v3 Cicer arietinum L. HOM05D004843 ORTHO05D005833 5.1e-11 73.9 249 26.5
Oeu052598.1 Olea europaea HOM05D004843 ORTHO05D005833 1.3e-06 59.3 87 35.6


User provided reference genes

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