Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb278840 Zea mays HOM05D000043 ORTHO05D441952 4.7e-76 288.1 184 100.0
Zm00001eb373560 Zea mays HOM05D000043 ORTHO05D000600 5.8e-34 148.3 163 58.3
Os06g0207500 Oryza sativa ssp. japonica HOM05D000043 ORTHO05D000600 8.5e-17 91.3 163 38.0
Zm00001eb256510 Zea mays HOM05D000043 ORTHO05D000600 8.2e-12 74.7 47 63.8
Os02g0773732 Oryza sativa ssp. japonica HOM05D000043 ORTHO05D000600 1.2e-10 70.9 41 65.9
Phvul.007G006500 Phaseolus vulgaris HOM05D000043 ORTHO05D000600 4.2e-08 62.4 37 59.5
Zm00001eb193280 Zea mays HOM05D000043 ORTHO05D000600 2.1e-07 60.1 165 27.3
Glyma.20G243600 Glycine max HOM05D000043 ORTHO05D000600 6.1e-07 58.5 36 58.3
FAN02G0957 Fragaria x ananassa HOM05D000043 ORTHO05D000600 1.0e-06 57.8 36 58.3
FAN09G3110 Fragaria x ananassa HOM05D000043 ORTHO05D000600 1.0e-06 57.8 36 58.3
Glyma.10G293600 Glycine max HOM05D000043 ORTHO05D000600 1.4e-06 57.4 33 63.6
CSS0044671 Camellia sinensis var. sinensis HOM05D000043 ORTHO05D000600 1.8e-06 57.0 36 52.8
FvH4_6g22040 Fragaria vesca HOM05D000043 ORTHO05D000600 1.8e-06 57.0 51 49.0
FAN14G1102 Fragaria x ananassa HOM05D000043 ORTHO05D000600 1.8e-06 57.0 51 49.0
Cpa.g.sc69.78 Carica papaya HOM05D000043 ORTHO05D000600 2.3e-06 56.6 30 66.7
EL10Ac4g10336 Beta vulgaris HOM05D000043 ORTHO05D000600 3.0e-06 56.2 38 50.0
FAN05G3512 Fragaria x ananassa HOM05D000043 ORTHO05D000600 5.2e-06 55.5 36 55.6
TAR369G0126 Trochodendron aralioides HOM05D000043 ORTHO05D000600 5.2e-06 55.5 48 43.8
arahy.Tifrunner.gnm1.ann1.2WDS0D Arachis hypogaea HOM05D000043 ORTHO05D000600 6.7e-06 55.1 28 67.9
arahy.Tifrunner.gnm1.ann1.47YT22 Arachis hypogaea HOM05D000043 ORTHO05D000600 6.7e-06 55.1 28 67.9
QL01p010083 Quercus lobata HOM05D000043 ORTHO05D000600 6.7e-06 55.1 36 50.0
RcHm_v2.0_Chr3g0479331 Rosa chinensis HOM05D000043 ORTHO05D000600 6.7e-06 55.1 77 35.1
Hund06398 Selenicereus undatus HOM05D000043 ORTHO05D000600 8.8e-06 54.7 40 50.0


User provided reference genes

Program Settings