Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb278420 Zea mays HOM05D003750 ORTHO05D004337 1.3e-127 460.3 347 100.0
Zm00001eb120700 Zea mays HOM05D003750 ORTHO05D004337 1.5e-46 191.0 323 62.8
Haze_13489 Corylus avellana HOM05D003750 ORTHO05D004337 4.1e-20 103.2 131 45.0
ClCG09G022350 Citrullus lanatus HOM05D003750 ORTHO05D004337 5.3e-20 102.8 151 42.4
Sed0024619 Sechium edule HOM05D003750 ORTHO05D004337 4.5e-19 99.8 151 41.1
arahy.Tifrunner.gnm1.ann1.Y7JGW6 Arachis hypogaea HOM05D003750 ORTHO05D004337 7.7e-19 99.0 158 41.1
Cfa022914 Carpinus fangiana HOM05D003750 ORTHO05D004337 1.3e-18 98.2 157 39.5
Lalb_Chr04g0248731 Lupinus albus HOM05D003750 ORTHO05D004337 1.3e-18 98.2 135 43.7
arahy.Tifrunner.gnm1.ann1.UWZ29M Arachis hypogaea HOM05D003750 ORTHO05D004337 1.7e-18 97.8 158 40.5
Cc05_g09310 Coffea canephora HOM05D003750 ORTHO05D004337 1.7e-18 97.8 153 41.2
TAR624G1252 Trochodendron aralioides HOM05D002606 ORTHO05D003016 1.7e-18 97.8 138 42.8
MELO3C014462.2 Cucumis melo HOM05D003750 ORTHO05D004337 2.2e-18 97.4 124 45.2
Glyma.14G027551 Glycine max HOM05D003750 ORTHO05D004337 2.2e-18 97.4 135 43.0
Phvul.008G190900 Phaseolus vulgaris HOM05D003750 ORTHO05D004337 3.8e-18 96.7 135 43.0
SGA_v2.0_scaffold70G23672 Striga asiatica HOM05D003750 ORTHO05D004337 3.8e-18 96.7 141 45.4
VMungo0647G1422 Vigna mungo HOM05D003750 ORTHO05D004337 3.8e-18 96.7 135 43.0
Gohir.D04G037100 Gossypium hirsutum HOM05D003750 ORTHO05D004337 5.0e-18 96.3 143 40.6
TAR626G1101 Trochodendron aralioides HOM05D003750 ORTHO05D004337 5.0e-18 96.3 136 41.9
unitig_747.g21612 Utricularia gibba HOM05D003750 ORTHO05D004337 5.0e-18 96.3 135 42.2
Psat2g014640 Pisum sativum HOM05D003750 ORTHO05D004337 6.5e-18 95.9 147 40.8
Actinidia11198 Actinidia chinensis HOM05D003750 ORTHO05D004337 8.5e-18 95.5 136 43.4
Glyma.02G287400 Glycine max HOM05D003750 ORTHO05D004337 8.5e-18 95.5 135 43.0
Gohir.A05G378400 Gossypium hirsutum HOM05D003750 ORTHO05D004337 8.5e-18 95.5 143 40.6
TPR.G12519 Trifolium pratense HOM05D003750 ORTHO05D004337 8.5e-18 95.5 135 43.0
COL.COLO4_33737 Corchorus olitorius HOM05D003750 ORTHO05D004337 1.1e-17 95.1 151 41.1
Gorai.012G041900 Gossypium raimondii HOM05D003750 ORTHO05D004337 1.4e-17 94.7 143 39.9
Oeu020066.1 Olea europaea HOM05D003750 ORTHO05D004337 1.4e-17 94.7 132 44.7
Phvul.006G033900 Phaseolus vulgaris HOM05D003750 ORTHO05D004337 1.4e-17 94.7 135 43.7
CSS0030446 Camellia sinensis var. sinensis HOM05D003750 ORTHO05D004337 2.5e-17 94.0 136 43.4
LjContig00310g0001182 Lotus japonicus HOM05D003750 ORTHO05D004337 2.5e-17 94.0 137 43.1
QL08p043924 Quercus lobata HOM05D003750 ORTHO05D004337 2.5e-17 94.0 130 43.8
Lalb_Chr17g0348311 Lupinus albus HOM05D003750 ORTHO05D004337 3.2e-17 93.6 135 42.2
Psat0s4925g0080 Pisum sativum HOM05D003750 ORTHO05D004337 3.2e-17 93.6 166 39.2
Potri.005G200900 Populus trichocarpa HOM05D003750 ORTHO05D004337 4.2e-17 93.2 138 42.0
HanXRQChr06g0171371 Helianthus annuus HOM05D003750 ORTHO05D004337 5.5e-17 92.8 136 42.6
Potri.002G060800 Populus trichocarpa HOM05D003750 ORTHO05D004337 5.5e-17 92.8 157 40.1
Sabra02G0049300 Salix brachista HOM05D003750 ORTHO05D004337 5.5e-17 92.8 130 43.1
Duzib187G0136 Durio zibethinus HOM05D003750 ORTHO05D004337 7.2e-17 92.4 134 41.8
Lsat_1_v5_gn_3_35901 Lactuca sativa HOM05D003750 ORTHO05D004337 7.2e-17 92.4 150 42.7
Os01g0726700 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 7.2e-17 92.4 136 41.9
vmacro12451 Vaccinium macrocarpon HOM05D003750 ORTHO05D004337 7.2e-17 92.4 150 40.0
Duzib264G0293 Durio zibethinus HOM05D003750 ORTHO05D004337 9.4e-17 92.0 120 43.3
Migut.M00516 Erythranthe guttata HOM05D003750 ORTHO05D004337 1.2e-16 91.7 134 44.0
BcaNung06740 Brassica carinata HOM05D003750 ORTHO05D004337 1.6e-16 91.3 137 40.9
A05p03190 Brassica napus HOM05D003750 ORTHO05D004337 1.6e-16 91.3 137 40.9
C04p03840 Brassica napus HOM05D003750 ORTHO05D004337 1.6e-16 91.3 137 40.9
BolC4t22020H Brassica oleracea HOM05D003750 ORTHO05D004337 1.6e-16 91.3 137 40.9
BraA05t19309Z Brassica rapa HOM05D003750 ORTHO05D004337 1.6e-16 91.3 137 40.9
CiPaw.03G189300 Carya illinoinensis HOM05D003750 ORTHO05D004337 1.6e-16 91.3 121 42.1
Glyma.08G309700 Glycine max HOM05D003750 ORTHO05D004337 1.6e-16 91.3 138 41.3
Medtr3g089570 Medicago truncatula HOM05D003750 ORTHO05D004337 1.6e-16 91.3 122 42.6
Cpa.g.sc50.77 Carica papaya HOM05D003750 ORTHO05D004337 2.1e-16 90.9 131 40.5
VMungo0540G2251 Vigna mungo HOM05D003750 ORTHO05D004337 2.1e-16 90.9 164 39.0
Sopen10g003700 Solanum pennellii HOM05D003750 ORTHO05D004337 2.7e-16 90.5 134 43.3
Atru.chr6.1510 Acer truncatum HOM05D003750 ORTHO05D004337 3.6e-16 90.1 120 43.3
AT2G42840 Arabidopsis thaliana HOM05D003750 ORTHO05D004337 3.6e-16 90.1 137 41.6
Duzib147G0801 Durio zibethinus HOM05D003750 ORTHO05D004337 3.6e-16 90.1 94 50.0
Glyma.18G106400 Glycine max HOM05D003750 ORTHO05D004337 3.6e-16 90.1 136 41.2
Lalb_Chr10g0106741 Lupinus albus HOM05D003750 ORTHO05D004337 3.6e-16 90.1 135 40.7
Oeu040027.1 Olea europaea HOM05D003750 ORTHO05D004337 3.6e-16 90.1 120 45.8
RcHm_v2.0_Chr2g0151161 Rosa chinensis HOM05D003750 ORTHO05D004337 3.6e-16 90.1 125 43.2
FvH4_6g38100 Fragaria vesca HOM05D003750 ORTHO05D004337 4.7e-16 89.7 125 43.2
FAN14G5523 Fragaria x ananassa HOM05D003750 ORTHO05D004337 4.7e-16 89.7 125 43.2
Solyc10g007800.3 Solanum lycopersicum HOM05D003750 ORTHO05D004337 4.7e-16 89.7 134 43.3
Solyc12g011010.2 Solanum lycopersicum HOM05D003750 ORTHO05D004337 4.7e-16 89.7 134 41.0
Sopen12g006370 Solanum pennellii HOM05D003750 ORTHO05D004337 4.7e-16 89.7 134 41.0
Ca_27365_v3 Cicer arietinum L. HOM05D003750 ORTHO05D004337 6.1e-16 89.4 133 42.1
CsaV3_6G038000 Cucumis sativus L. HOM05D003750 ORTHO05D004337 6.1e-16 89.4 120 42.5
FAN05G3098 Fragaria x ananassa HOM05D003750 ORTHO05D004337 6.1e-16 89.4 125 43.2
unitig_46.g18277 Utricularia gibba HOM05D003750 ORTHO05D004337 6.1e-16 89.4 135 40.7
BcaB06g29267 Brassica carinata HOM05D003750 ORTHO05D004337 7.9e-16 89.0 137 40.9
Carub.0004s2528 Capsella rubella HOM05D003750 ORTHO05D004337 7.9e-16 89.0 137 40.1
ClCG02G018380 Citrullus lanatus HOM05D003750 ORTHO05D004337 7.9e-16 89.0 120 42.5
MELO3C019689.2 Cucumis melo HOM05D003750 ORTHO05D004337 7.9e-16 89.0 120 42.5
Lj6g0002200 Lotus japonicus HOM05D003750 ORTHO05D004337 7.9e-16 89.0 121 43.0
Peaxi162Scf00807g00024 Petunia axillaris HOM05D003750 ORTHO05D004337 7.9e-16 89.0 138 39.1
Rhsim06G0118400 Rhododendron simsii HOM05D003750 ORTHO05D004337 7.9e-16 89.0 124 41.9
MSTRG.15053 Avicennia marina HOM05D003750 ORTHO05D004337 1.0e-15 88.6 120 44.2
Peaxi162Scf00688g00432 Petunia axillaris HOM05D003750 ORTHO05D004337 1.0e-15 88.6 132 40.9
TWI14G1010 Tripterygium wilfordii HOM05D003750 ORTHO05D004337 1.0e-15 88.6 131 39.7
CsaV3_6G015810 Cucumis sativus L. HOM05D003750 ORTHO05D004337 1.4e-15 88.2 120 42.5
Eucgr.K01198 Eucalyptus grandis HOM05D003750 ORTHO05D004337 1.4e-15 88.2 129 41.1
Lalb_Chr19g0137861 Lupinus albus HOM05D003750 ORTHO05D004337 1.4e-15 88.2 133 40.6
Prupe.3G171000 Prunus persica HOM05D003750 ORTHO05D004337 1.4e-15 88.2 125 41.6
PGR142G2515 Punica granatum HOM05D003750 ORTHO05D004337 1.4e-15 88.2 133 40.6
Lalb_Chr20g0108881 Lupinus albus HOM05D003750 ORTHO05D004337 1.8e-15 87.8 134 39.6
Manes.01G128300 Manihot esculenta HOM05D003750 ORTHO05D004337 1.8e-15 87.8 130 41.5
Nn3g20965 Nelumbo nucifera HOM05D003750 ORTHO05D004337 1.8e-15 87.8 145 38.6
THA.LOC104803179 Tarenaya hassleriana HOM05D003750 ORTHO05D004337 1.8e-15 87.8 132 39.4
CAN.G1191.4 Capsicum annuum HOM05D003750 ORTHO05D004337 2.3e-15 87.4 120 44.2
CARHR137920 Cardamine hirsuta HOM05D003750 ORTHO05D004337 2.3e-15 87.4 137 40.1
BcaC02g07218 Brassica carinata HOM05D003750 ORTHO05D004337 3.0e-15 87.0 138 40.6
A04p32410 Brassica napus HOM05D003750 ORTHO05D004337 3.0e-15 87.0 138 40.6
C04p69930 Brassica napus HOM05D003750 ORTHO05D004337 3.0e-15 87.0 138 40.6
BolC4t28493H Brassica oleracea HOM05D003750 ORTHO05D004337 3.0e-15 87.0 138 40.6
BraA04t18694Z Brassica rapa HOM05D003750 ORTHO05D004337 3.0e-15 87.0 138 40.6
Thhalv10016927m.g Eutrema salsugineum HOM05D003750 ORTHO05D004337 3.0e-15 87.0 155 38.7
PGSC0003DMG400007796 Solanum tuberosum HOM05D003750 ORTHO05D004337 3.0e-15 87.0 134 40.3
unitig_37.g12854 Utricularia gibba HOM05D003750 ORTHO05D004337 3.0e-15 87.0 122 41.8
MD09G1154000 Malus domestica HOM05D003750 ORTHO05D004337 3.9e-15 86.7 123 40.7
Sabra05G0152900 Salix brachista HOM05D003750 ORTHO05D004337 5.1e-15 86.3 138 39.9
Sed0013297 Sechium edule HOM05D003750 ORTHO05D004337 5.1e-15 86.3 119 41.2
Sc15g0002430 Simmondsia chinensis HOM05D003750 ORTHO05D004337 5.1e-15 86.3 134 41.8
Aqoxy4G00176 Aquilegia oxysepala HOM05D003750 ORTHO05D004337 6.7e-15 85.9 119 40.3
ECA246G0286 Erigeron canadensis HOM05D003750 ORTHO05D004337 6.7e-15 85.9 157 38.2
PGSC0003DMG400021281 Solanum tuberosum HOM05D003750 ORTHO05D004337 6.7e-15 85.9 123 43.1
Thecc.01G160900 Theobroma cacao HOM05D003750 ORTHO05D004337 6.7e-15 85.9 120 41.7
TWI59G1023 Tripterygium wilfordii HOM05D003750 ORTHO05D004337 6.7e-15 85.9 131 39.7
SalBow7G0202 Salvia bowleyana HOM05D003750 ORTHO05D004337 8.8e-15 85.5 134 38.1
Sp4g24960 Schrenkiella parvula HOM05D003750 ORTHO05D004337 8.8e-15 85.5 137 39.4
Sed0014259 Sechium edule HOM05D003750 ORTHO05D004337 8.8e-15 85.5 122 41.0
Nitab4.5_0006934g0020 Nicotiana tabacum HOM05D003750 ORTHO05D004337 1.1e-14 85.1 132 39.4
Zm00001eb239390 Zea mays HOM05D003750 ORTHO05D004337 1.1e-14 85.1 152 39.5
Nitab4.5_0001675g0060 Nicotiana tabacum HOM05D003750 ORTHO05D004337 1.5e-14 84.7 124 41.9
Nitab4.5_0000446g0080 Nicotiana tabacum HOM05D003750 ORTHO05D004337 2.0e-14 84.3 132 39.4
MD17G1140600 Malus domestica HOM05D003750 ORTHO05D004337 2.6e-14 84.0 123 39.8
SalBow7G1469 Salvia bowleyana HOM05D003750 ORTHO05D004337 2.6e-14 84.0 103 44.7
CANSAT64G2056 Cannabis sativa HOM05D003750 ORTHO05D004337 3.3e-14 83.6 137 38.7
Ciclev10032169m.g Citrus clementina HOM05D003750 ORTHO05D004337 4.4e-14 83.2 138 39.1
FAN02G2641 Fragaria x ananassa HOM05D003750 ORTHO05D004337 4.4e-14 83.2 125 40.8
MBI06_g20684_MAGBIO Magnolia biondii HOM05D003750 ORTHO05D004337 4.4e-14 83.2 158 38.6
Nitab4.5_0013539g0020 Nicotiana tabacum HOM05D003750 ORTHO05D004337 4.4e-14 83.2 124 41.9
CAN.G164.22 Capsicum annuum HOM05D003750 ORTHO05D004337 5.7e-14 82.8 126 39.7
Migut.H02092 Erythranthe guttata HOM05D003750 ORTHO05D004337 5.7e-14 82.8 139 37.4
Aa31LG1G24600 Aethionema arabicum HOM05D003750 ORTHO05D004337 7.4e-14 82.4 127 39.4
Nitab4.5_0002027g0180 Nicotiana tabacum HOM05D003750 ORTHO05D004337 7.4e-14 82.4 144 40.3
CAN.G585.54 Capsicum annuum HOM05D003750 ORTHO05D004337 9.7e-14 82.0 124 40.3
DCAR_021309 Daucus carota HOM05D003750 ORTHO05D004337 9.7e-14 82.0 130 40.8
MSTRG.6755 Avicennia marina HOM05D003750 ORTHO05D004337 1.3e-13 81.6 122 41.0
DCAR_016898 Daucus carota HOM05D003750 ORTHO05D004337 1.3e-13 81.6 145 42.1
unitig_899.g15337 Utricularia gibba HOM05D003750 ORTHO05D004337 1.7e-13 81.3 133 38.3
Nn6g34390 Nelumbo nucifera HOM05D003750 ORTHO05D004337 2.2e-13 80.9 196 39.8
Zm00001eb154370 Zea mays HOM05D003750 ORTHO05D004337 2.2e-13 80.9 120 40.8
Dinv12695 Davidia involucrata HOM05D003750 ORTHO05D004337 2.8e-13 80.5 121 41.3
arahy.Tifrunner.gnm1.ann1.N94NTJ Arachis hypogaea HOM05D003750 ORTHO05D004337 3.7e-13 80.1 153 35.9
Glyma.02G280550 Glycine max HOM05D003750 ORTHO05D004337 3.7e-13 80.1 138 40.6
PGSC0003DMG400017342 Solanum tuberosum HOM05D003750 ORTHO05D004337 3.7e-13 80.1 124 39.5
AL4G41450 Arabidopsis lyrata HOM05D003750 ORTHO05D004337 4.8e-13 79.7 130 39.2
arahy.Tifrunner.gnm1.ann1.ZP8MLZ Arachis hypogaea HOM05D003750 ORTHO05D004337 1.1e-12 78.6 118 40.7
PSO675G0845 Papaver somniferum HOM05D003750 ORTHO05D004337 1.1e-12 78.6 124 40.3
Lsat_1_v5_gn_4_26620 Lactuca sativa HOM05D003750 ORTHO05D004337 1.4e-12 78.2 136 36.8
PSO541G0678 Papaver somniferum HOM05D003750 ORTHO05D004337 1.4e-12 78.2 124 41.1
Nitab4.5_0001402g0030 Nicotiana tabacum HOM05D003750 ORTHO05D004337 1.8e-12 77.8 144 38.9
Sopen07g029310 Solanum pennellii HOM05D003750 ORTHO05D004337 1.8e-12 77.8 124 37.9
Solyc07g055950.3 Solanum lycopersicum HOM05D003750 ORTHO05D004337 2.4e-12 77.4 124 37.9
HPP92_009096 Vanilla planifolia HOM05D003750 ORTHO05D004337 2.4e-12 77.4 95 47.4
DCAR_009794 Daucus carota HOM05D003750 ORTHO05D004337 3.1e-12 77.0 140 40.0
TPR.G16759 Trifolium pratense HOM05D003750 ORTHO05D004337 4.1e-12 76.6 117 40.2
CDE09G1130 Ceratophyllum demersum HOM05D003750 ORTHO05D004337 7.0e-12 75.9 120 41.7
Zm00001eb277660 Zea mays HOM05D003750 ORTHO05D004337 1.5e-11 74.7 96 45.8
MBI07_g30204_MAGBIO Magnolia biondii HOM05D003750 ORTHO05D004337 2.0e-11 74.3 133 41.4
Ca_06287_v3 Cicer arietinum L. HOM05D003750 ORTHO05D004337 2.6e-11 73.9 93 47.3
ECA234G0795 Erigeron canadensis HOM05D001021 ORTHO05D000894 4.5e-11 73.2 102 42.2
unitig_62.g23108 Utricularia gibba HOM05D003750 ORTHO05D004337 4.5e-11 73.2 133 36.1
Hund08216 Selenicereus undatus HOM05D003750 ORTHO05D004337 1.0e-10 72.0 133 38.3
Zm00001eb384740 Zea mays HOM05D003750 ORTHO05D004337 1.0e-10 72.0 92 46.7
ATR0737G120 Amborella trichopoda HOM05D003750 ORTHO05D004337 1.3e-10 71.6 126 34.9
HanXRQChr01g0028591 Helianthus annuus HOM05D003750 ORTHO05D004337 1.3e-10 71.6 146 35.6
HanXRQChr17g0565481 Helianthus annuus HOM05D003750 ORTHO05D004337 2.2e-10 70.9 124 37.1
SEGI_25228 Sequoiadendron giganteum HOM05D003750 ORTHO05D004337 1.1e-09 68.6 128 35.2
HanXRQChr17g0565191 Helianthus annuus HOM05D003750 ORTHO05D004337 1.5e-09 68.2 122 36.9
HanXRQChr17g0565411 Helianthus annuus HOM05D003750 ORTHO05D004337 1.5e-09 68.2 122 36.9
HanXRQChr17g0565441 Helianthus annuus HOM05D003750 ORTHO05D004337 1.5e-09 68.2 122 36.9
HanXRQChr17g0565471 Helianthus annuus HOM05D003750 ORTHO05D004337 1.5e-09 68.2 122 36.9
CDE02G2915 Ceratophyllum demersum HOM05D003750 ORTHO05D004337 1.9e-09 67.8 92 40.2
Os06g0553200 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 1.9e-09 67.8 103 41.7
Peaxi162Scf00035g00302 Petunia axillaris HOM05D003750 ORTHO05D004337 1.9e-09 67.8 118 35.6
Ah.01g013400 Amaranthus hybridus HOM05D003750 ORTHO05D004337 3.2e-09 67.0 119 36.1
unitig_85.g27387 Utricularia gibba HOM05D003750 ORTHO05D004337 5.2e-07 59.7 88 42.0
Eucgr.A01963 Eucalyptus grandis HOM05D003750 ORTHO05D004337 8.8e-07 58.9 145 33.8
Os02g0230300 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 8.8e-07 58.9 43 62.8
Ah.01g001950 Amaranthus hybridus HOM05D003750 ORTHO05D004337 2.0e-06 57.8 122 32.0


User provided reference genes

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