Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb277980 Zea mays HOM05D000905 ORTHO05D000749 5.6e-150 534.3 271 100.0
Zm00001eb371780 Zea mays HOM05D000905 ORTHO05D000749 7.7e-83 311.2 166 96.4
Zm00001eb280060 Zea mays HOM05D000905 ORTHO05D000749 9.8e-62 241.1 172 77.9
Zm00001eb271670 Zea mays HOM05D000739 ORTHO05D015695 3.5e-59 232.6 172 75.6
Os06g0244700 Oryza sativa ssp. japonica HOM05D000905 ORTHO05D000749 1.2e-46 191.0 174 63.2
Zm00001eb144750 Zea mays HOM05D000228 ORTHO05D015695 1.6e-40 170.6 121 76.9
Zm00001eb023470 Zea mays HOM05D000905 ORTHO05D015695 2.3e-39 166.8 167 61.1
Zm00001eb254080 Zea mays HOM05D000905 ORTHO05D000749 2.5e-33 146.7 171 53.2
Os02g0739900 Oryza sativa ssp. japonica HOM05D000905 ORTHO05D000749 1.4e-28 131.0 173 50.3
Zm00001eb228880 Zea mays HOM05D000905 ORTHO05D015695 9.2e-28 128.3 179 48.0
Zm00001eb224330 Zea mays HOM05D000905 ORTHO05D015695 1.1e-25 121.3 191 43.5
Zm00001eb164070 Zea mays HOM05D000905 ORTHO05D000749 6.2e-24 115.5 171 46.8
Zm00001eb321810 Zea mays HOM05D000905 ORTHO05D015695 9.6e-17 91.7 57 82.5
Zm00001eb324350 Zea mays HOM05D000905 ORTHO05D015695 1.6e-16 90.9 45 100.0
Zm00001eb377230 Zea mays HOM05D000905 ORTHO05D015695 4.7e-16 89.4 53 83.0
TAR374G1378 Trochodendron aralioides HOM05D000905 ORTHO05D000749 6.0e-11 72.4 171 32.2
PSO832G0782 Papaver somniferum HOM05D000905 ORTHO05D000749 3.9e-10 69.7 184 27.7
Prupe.5G181300 Prunus persica HOM05D000905 ORTHO05D000749 3.9e-10 69.7 222 29.7
PGR044G2393 Punica granatum HOM05D000905 ORTHO05D000749 5.1e-10 69.3 213 27.2
PSO591G0327 Papaver somniferum HOM05D000905 ORTHO05D000749 1.1e-09 68.2 184 28.3
CiPaw.11G033800 Carya illinoinensis HOM05D000905 ORTHO05D000749 1.5e-09 67.8 216 29.6
TAR371G0402 Trochodendron aralioides HOM05D000905 ORTHO05D000749 1.9e-09 67.4 185 33.0
TAR629G0333 Trochodendron aralioides HOM05D000905 ORTHO05D000749 2.5e-09 67.0 176 34.7
Zm00001eb240800 Zea mays HOM05D000905 ORTHO05D015695 3.3e-09 66.6 171 32.7
MBI15_g14834_MAGBIO Magnolia biondii HOM05D000905 ORTHO05D000749 5.6e-09 65.9 192 32.3
FAN13G0029 Fragaria x ananassa HOM05D000905 ORTHO05D000749 1.6e-08 64.3 181 33.7
Nn3g17052 Nelumbo nucifera HOM05D000905 ORTHO05D000749 1.6e-08 64.3 183 33.9
CANSAT80G0025 Cannabis sativa HOM05D000905 ORTHO05D000749 2.8e-08 63.5 188 30.9
Dinv02654 Davidia involucrata HOM05D000905 ORTHO05D000749 2.8e-08 63.5 182 34.1
Potri.015G069200 Populus trichocarpa HOM05D000905 ORTHO05D000749 3.6e-08 63.2 178 31.5
Aqoxy3G03163 Aquilegia oxysepala HOM05D000905 ORTHO05D000749 4.8e-08 62.8 204 30.4
Dinv13123 Davidia involucrata HOM05D000905 ORTHO05D000749 8.1e-08 62.0 181 33.7
FAN08G2607 Fragaria x ananassa HOM05D000905 ORTHO05D000749 8.1e-08 62.0 181 33.1
Atru.chr9.2382 Acer truncatum HOM05D000905 ORTHO05D000749 1.8e-07 60.8 215 30.7
FAN04G1724 Fragaria x ananassa HOM05D000905 ORTHO05D000749 1.8e-07 60.8 179 33.0
Haze_07420 Corylus avellana HOM05D000905 ORTHO05D000749 2.4e-07 60.5 183 30.6
Haze_12114 Corylus avellana HOM05D000905 ORTHO05D000749 2.4e-07 60.5 191 31.9
MD14G1188900 Malus domestica HOM05D000905 ORTHO05D000749 2.4e-07 60.5 210 26.2
TAR622G1363 Trochodendron aralioides HOM05D000905 ORTHO05D000749 2.4e-07 60.5 176 33.5
ClCG06G016620 Citrullus lanatus HOM05D000905 ORTHO05D000749 3.1e-07 60.1 210 29.0
Gorai.003G071900 Gossypium raimondii HOM05D000905 ORTHO05D000749 3.1e-07 60.1 212 28.8
Phvul.009G183200 Phaseolus vulgaris HOM05D000905 ORTHO05D000749 3.1e-07 60.1 181 32.0
Gohir.D03G089500 Gossypium hirsutum HOM05D000905 ORTHO05D000749 4.0e-07 59.7 212 28.8
vmacro16301 Vaccinium macrocarpon HOM05D000905 ORTHO05D000749 4.0e-07 59.7 248 27.4
arahy.Tifrunner.gnm1.ann1.DJ21JL Arachis hypogaea HOM05D000905 ORTHO05D000749 5.3e-07 59.3 188 33.0
AUR62031063 Chenopodium quinoa HOM05D000905 ORTHO05D000749 5.3e-07 59.3 180 28.9
Gohir.A03G076200 Gossypium hirsutum HOM05D000905 ORTHO05D000749 5.3e-07 59.3 210 29.5
Manes.14G071700 Manihot esculenta HOM05D000905 ORTHO05D000749 5.3e-07 59.3 211 28.0
CsaV3_1G001890 Cucumis sativus L. HOM05D000905 ORTHO05D000749 6.9e-07 58.9 210 29.0
Glyma.06G187500 Glycine max HOM05D000905 ORTHO05D000749 6.9e-07 58.9 181 33.1
Ciclev10019374m.g Citrus clementina HOM05D000905 ORTHO05D000749 9.0e-07 58.5 204 28.9
FvH4_5g16200 Fragaria vesca HOM05D000905 ORTHO05D000749 9.0e-07 58.5 181 30.4
FAN18G4018 Fragaria x ananassa HOM05D000905 ORTHO05D000749 9.0e-07 58.5 181 30.4
Glyma.05G032600 Glycine max HOM05D000905 ORTHO05D000749 9.0e-07 58.5 177 29.4
Potri.012G074400 Populus trichocarpa HOM05D000905 ORTHO05D000749 9.0e-07 58.5 179 27.4
PGR102G2108 Punica granatum HOM05D000905 ORTHO05D000749 9.0e-07 58.5 180 32.2
Sabra15G0093600 Salix brachista HOM05D000905 ORTHO05D000749 1.2e-06 58.2 178 31.5
Glyma.17G094100 Glycine max HOM05D000905 ORTHO05D000749 1.5e-06 57.8 173 31.2
MD06G1183000 Malus domestica HOM05D000905 ORTHO05D000749 1.5e-06 57.8 213 28.2
TWI15G0950 Tripterygium wilfordii HOM05D000905 ORTHO05D000749 1.5e-06 57.8 209 28.2
MELO3C017132.2 Cucumis melo HOM05D000905 ORTHO05D000749 2.6e-06 57.0 210 28.6
GSVIVG01007847001 Vitis vinifera HOM05D000905 ORTHO05D000749 2.6e-06 57.0 188 30.3
AUR62008301 Chenopodium quinoa HOM05D000905 ORTHO05D000749 3.4e-06 56.6 213 26.8
Thecc.02G238300 Theobroma cacao HOM05D000905 ORTHO05D000749 3.4e-06 56.6 209 32.5
Hma1.2p1_0002F.1_g002960 Hydrangea macrophylla HOM05D000905 ORTHO05D000749 4.5e-06 56.2 171 34.5
Cfa009082 Carpinus fangiana HOM05D000905 ORTHO05D000749 5.8e-06 55.8 188 28.7
Eucgr.K02894 Eucalyptus grandis HOM05D000905 ORTHO05D000749 5.8e-06 55.8 182 27.5
Lalb_Chr13g0298011 Lupinus albus HOM05D000905 ORTHO05D000749 5.8e-06 55.8 188 31.4
QL03p067468 Quercus lobata HOM05D000905 ORTHO05D000749 5.8e-06 55.8 191 29.8
TWI81G0247 Tripterygium wilfordii HOM05D000905 ORTHO05D000749 5.8e-06 55.8 207 28.5
TPR.G38409 Trifolium pratense HOM05D000905 ORTHO05D000749 7.6e-06 55.5 173 33.5
CSS0015033 Camellia sinensis var. sinensis HOM05D000905 ORTHO05D000749 9.9e-06 55.1 214 29.0
CsaV3_6G036020 Cucumis sativus L. HOM05D000905 ORTHO05D000749 9.9e-06 55.1 178 29.8
Gohir.D05G322100 Gossypium hirsutum HOM05D000905 ORTHO05D000749 9.9e-06 55.1 187 29.9
Gorai.009G345700 Gossypium raimondii HOM05D000905 ORTHO05D000749 9.9e-06 55.1 187 29.9
Lj9C455T6 Lonicera japonica HOM05D000905 ORTHO05D000749 9.9e-06 55.1 183 29.5
RcHm_v2.0_Chr7g0179911 Rosa chinensis HOM05D000905 ORTHO05D000749 9.9e-06 55.1 212 28.3


User provided reference genes

Program Settings