Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb277260 Zea mays HOM05D009627 ORTHO05D010887 1.2e-85 319.7 156 100.0
Os06g0580100 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 7.6e-51 204.1 155 66.5
Os02g0216300 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 1.3e-37 160.2 148 57.4
Os01g0238200 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 1.3e-29 133.7 117 58.1
Os06g0147100 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 1.7e-29 133.3 115 58.3
Os06g0147400 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 6.3e-29 131.3 131 49.6
Zm00001eb339450 Zea mays HOM05D009627 ORTHO05D010887 8.5e-26 120.9 114 54.4
Os01g0714600 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 2.1e-24 116.3 116 50.0
Os06g0147000 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 2.7e-24 115.9 109 57.8
Zm00001eb270400 Zea mays HOM05D009627 ORTHO05D010887 3.6e-24 115.5 110 57.3
Zm00001eb154990 Zea mays HOM05D009627 ORTHO05D010887 1.0e-23 114.0 133 51.1
Zm00001eb205270 Zea mays HOM05D009627 ORTHO05D010887 1.0e-23 114.0 134 48.5
Os06g0146800 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 1.4e-23 113.6 109 56.0
Os06g0147250 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 3.0e-23 112.5 109 52.3
Zm00001eb270420 Zea mays HOM05D009627 ORTHO05D010887 2.8e-21 105.9 118 51.7
Zm00001eb377120 Zea mays HOM05D009627 ORTHO05D010887 2.6e-19 99.4 107 48.6
Os06g0147300 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 3.5e-19 99.0 108 46.3
MBI06_g46441_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 1.3e-18 97.1 117 40.2
Zm00001eb377070 Zea mays HOM05D009627 ORTHO05D010887 1.3e-18 97.1 112 49.1
Os01g0585200 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 6.5e-18 94.7 112 42.9
MBI06_g03980_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 1.1e-17 94.0 112 41.1
MBI03_g33921_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 1.4e-15 87.0 125 35.2
MBI06_g04640_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 5.2e-15 85.1 119 37.8
MBI05_g05683_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 2.0e-14 83.2 113 37.2
MBI18_g01155_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 2.6e-14 82.8 119 37.0
MBI18_g00962_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 4.4e-14 82.0 108 40.7
MBI05_g28284_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D010887 5.7e-14 81.6 116 37.1
Os05g0181700 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 9.7e-14 80.9 144 34.7
Zm00001eb266700 Zea mays HOM05D009627 ORTHO05D010887 1.7e-13 80.1 102 51.0
Zm00001eb401070 Zea mays HOM05D009627 ORTHO05D010887 8.2e-13 77.8 108 39.8
MBI03_g32214_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 3.1e-12 75.9 137 29.9
MBI18_g41917_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 3.1e-12 75.9 117 35.9
MBI03_g35364_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 7.0e-12 74.7 137 30.7
Os06g0146600 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 1.3e-10 70.5 94 41.5
TAR481G0008 Trochodendron aralioides HOM05D008333 ORTHO05D010371 1.3e-10 70.5 125 32.8
TAR481G0013 Trochodendron aralioides HOM05D008333 ORTHO05D010371 1.3e-10 70.5 125 32.8
Zm00001eb160530 Zea mays HOM05D009627 ORTHO05D010887 1.3e-10 70.5 121 36.4
Zm00001eb377110 Zea mays HOM05D009627 ORTHO05D010887 1.7e-10 70.1 120 42.5
HPP92_007635 Vanilla planifolia HOM05D065668 ORTHO05D010887 1.9e-09 66.6 106 35.8
Zm00001eb346920 Zea mays HOM05D009627 ORTHO05D010887 2.5e-09 66.2 96 37.5
MBI03_g33915_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 1.2e-08 63.9 120 29.2
Nn4g23042 Nelumbo nucifera HOM05D008333 ORTHO05D010371 2.7e-08 62.8 142 29.6
COL.COLO4_25183 Corchorus olitorius HOM05D008333 ORTHO05D010371 6.1e-08 61.6 119 28.6
Nn3g17126 Nelumbo nucifera HOM05D008333 ORTHO05D010371 1.4e-07 60.5 116 31.0
Gohir.A09G021000 Gossypium hirsutum HOM05D008333 ORTHO05D010371 2.0e-06 56.6 113 29.2
Duzib147G0630 Durio zibethinus HOM05D008333 ORTHO05D010371 2.6e-06 56.2 133 28.6
Os06g0147600 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D298704 3.3e-06 55.8 64 46.9
TAR371G0090 Trochodendron aralioides HOM05D008333 ORTHO05D010371 5.7e-06 55.1 114 31.6


User provided reference genes

Program Settings