Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb274510 Zea mays HOM05D012622 ORTHO05D013619 1.6e-232 808.9 379 100.0
Zm00001eb274490 Zea mays HOM05D012622 ORTHO05D013619 4.3e-217 757.7 384 94.5
Zm00001eb274580 Zea mays HOM05D012622 ORTHO05D013619 2.2e-216 755.4 384 94.3
Zm00001eb442270 Zea mays HOM05D012622 ORTHO05D013619 2.2e-216 755.4 384 94.3
Zm00001eb094120 Zea mays HOM05D012622 ORTHO05D013619 9.5e-156 553.9 380 71.6
Zm00001eb094090 Zea mays HOM05D012622 ORTHO05D013619 3.4e-153 545.4 380 70.8
Zm00001eb094150 Zea mays HOM05D012622 ORTHO05D013619 4.4e-145 518.5 330 75.5
Zm00001eb173740 Zea mays HOM05D012622 ORTHO05D013619 1.2e-118 430.6 283 72.4
Zm00001eb094100 Zea mays HOM05D012622 ORTHO05D013619 8.8e-69 265.0 167 73.7
Zm00001eb094130 Zea mays HOM05D012622 ORTHO05D013619 8.8e-69 265.0 167 73.7
Os09g0380600 Oryza sativa ssp. japonica HOM05D012622 ORTHO05D013619 4.6e-33 146.4 359 30.6
TAR374G1214 Trochodendron aralioides HOM05D007354 ORTHO05D006294 8.4e-19 99.0 299 28.8
TAR374G0265 Trochodendron aralioides HOM05D007354 ORTHO05D006294 4.6e-17 93.2 299 28.4
Os03g0779800 Oryza sativa ssp. japonica HOM05D023874 ORTHO05D013619 1.0e-16 92.0 351 26.2
TAR374G0822 Trochodendron aralioides HOM05D007354 ORTHO05D006294 2.9e-11 73.9 277 24.9
Rhsim06G0216900 Rhododendron simsii HOM05D003035 ORTHO05D000440 3.8e-11 73.6 308 23.4
Rhsim06G0217100 Rhododendron simsii HOM05D007354 ORTHO05D006294 7.1e-10 69.3 289 23.2
TWI38G2071 Tripterygium wilfordii HOM05D003035 ORTHO05D000440 9.3e-10 68.9 289 26.0
Os02g0599400 Oryza sativa ssp. japonica HOM05D012622 ORTHO05D013619 7.9e-09 65.9 178 24.7
QL08p010254 Quercus lobata HOM05D003035 ORTHO05D000440 2.3e-08 64.3 307 21.5
QL08p010296 Quercus lobata HOM05D003035 ORTHO05D006294 5.1e-08 63.2 308 22.1
Os05g0143700 Oryza sativa ssp. japonica HOM05D012622 ORTHO05D013619 2.5e-07 60.8 131 27.5
QL08p010225 Quercus lobata HOM05D003035 ORTHO05D000440 9.6e-07 58.9 285 22.5
Rhsim08G0204900 Rhododendron simsii HOM05D007354 ORTHO05D006294 1.3e-06 58.5 100 31.0
Rhsim08G0204500 Rhododendron simsii HOM05D007354 ORTHO05D006294 2.8e-06 57.4 123 29.3
HanXRQChr01g0025311 Helianthus annuus HOM05D008265 ORTHO05D000440 4.8e-06 56.6 278 21.2


User provided reference genes

Program Settings