Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb273610 Zea mays HOM05D005864 ORTHO05D006770 6.3e-183 644.0 344 100.0
Zm00001eb225260 Zea mays HOM05D005864 ORTHO05D006770 1.2e-101 374.0 219 91.8
Os02g0161200 Oryza sativa ssp. japonica HOM05D005864 ORTHO05D006770 2.6e-59 233.4 319 50.2
Zm00001eb207650 Zea mays HOM05D005864 ORTHO05D006770 5.4e-57 225.7 325 50.5
Nn1g07000 Nelumbo nucifera HOM05D005864 ORTHO05D006770 1.1e-36 158.3 332 38.3
GSVIVG01030622001 Vitis vinifera HOM05D005864 ORTHO05D006770 4.2e-33 146.4 323 37.8
CDE05G1184 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 3.4e-27 126.7 257 40.5
TAR624G1226 Trochodendron aralioides HOM05D005864 ORTHO05D006770 1.4e-25 121.3 154 47.4
QL08p033779 Quercus lobata HOM05D005864 ORTHO05D006770 3.2e-25 120.2 252 40.1
Dinv18530 Davidia involucrata HOM05D005864 ORTHO05D006770 5.4e-25 119.4 252 37.7
HPP92_002197 Vanilla planifolia HOM05D005864 ORTHO05D006770 3.5e-24 116.7 294 36.1
CDE05G3135 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 1.0e-23 115.2 257 38.1
CiPaw.04G117700 Carya illinoinensis HOM05D005864 ORTHO05D006770 3.0e-23 113.6 236 37.3
Hma1.2p1_0613F.1_g189160 Hydrangea macrophylla HOM05D005864 ORTHO05D006770 6.6e-23 112.5 324 33.3
CiPaw.03G162800 Carya illinoinensis HOM05D005864 ORTHO05D006770 2.5e-22 110.5 346 31.8
Oeu041940.1 Olea europaea HOM05D005864 ORTHO05D006770 9.6e-22 108.6 269 37.2
Atru.chr6.3147 Acer truncatum HOM05D005864 ORTHO05D006770 2.1e-21 107.5 240 38.3
PSO675G8332 Papaver somniferum HOM05D005864 ORTHO05D006770 2.8e-21 107.1 254 38.6
PSO541G3214 Papaver somniferum HOM05D005864 ORTHO05D006770 4.8e-21 106.3 259 36.3
TWI36G0516 Tripterygium wilfordii HOM05D005864 ORTHO05D006770 4.8e-21 106.3 301 33.9
Nitab4.5_0000631g0060 Nicotiana tabacum HOM05D005864 ORTHO05D006770 8.1e-21 105.5 284 32.7
Potri.007G121700 Populus trichocarpa HOM05D005864 ORTHO05D006770 1.1e-20 105.1 246 37.8
Medtr4g046697 Medicago truncatula HOM05D005864 ORTHO05D006770 2.4e-20 104.0 268 35.1
Manes.12G077600 Manihot esculenta HOM05D005864 ORTHO05D006770 4.0e-20 103.2 241 35.7
Aqoxy4G02070 Aquilegia oxysepala HOM05D005864 ORTHO05D006770 5.3e-20 102.8 255 36.1
Sc21g0001650 Simmondsia chinensis HOM05D005864 ORTHO05D006770 9.0e-20 102.1 254 33.9
Migut.M00396 Erythranthe guttata HOM05D005864 ORTHO05D006770 1.2e-19 101.7 239 36.8
Thecc.02G162100 Theobroma cacao HOM05D005864 ORTHO05D006770 1.2e-19 101.7 270 35.9
Psat7g195480 Pisum sativum HOM05D005864 ORTHO05D006770 1.7e-18 97.8 240 35.4
Eucgr.K00811 Eucalyptus grandis HOM05D005864 ORTHO05D006770 3.8e-18 96.7 265 33.6
TWI75G1887 Tripterygium wilfordii HOM05D005864 ORTHO05D006770 3.8e-18 96.7 274 33.6
Lj3g0027429 Lotus japonicus HOM05D005864 ORTHO05D006770 1.1e-17 95.1 292 31.5
ATR0794G118 Amborella trichopoda HOM05D005864 ORTHO05D006770 1.4e-17 94.7 354 32.2
SHI10272 Sapria himalayana HOM05D005864 ORTHO05D006770 2.4e-17 94.0 248 36.3
unitig_699.g19613 Utricularia gibba HOM05D005864 ORTHO05D006770 3.2e-17 93.6 238 35.7
PGR142G4274 Punica granatum HOM05D005864 ORTHO05D006770 4.2e-17 93.2 239 34.3
Dinv39688 Davidia involucrata HOM05D005864 ORTHO05D006770 7.1e-17 92.4 323 31.9
Glyma.06G306800 Glycine max HOM05D005864 ORTHO05D006770 1.6e-16 91.3 289 32.9
AL3G35960 Arabidopsis lyrata HOM05D005864 ORTHO05D006770 4.6e-16 89.7 335 28.7
Eucgr.K00844 Eucalyptus grandis HOM05D005864 ORTHO05D006770 4.6e-16 89.7 257 33.1
MELO3C018803.2 Cucumis melo HOM05D005864 ORTHO05D006770 7.9e-16 89.0 239 35.1
Thhalv10020800m.g Eutrema salsugineum HOM05D005864 ORTHO05D006770 1.3e-15 88.2 328 29.6
Phvul.011G106100 Phaseolus vulgaris HOM05D005864 ORTHO05D006770 1.3e-15 88.2 298 30.9
Haze_12896 Corylus avellana HOM05D005864 ORTHO05D006770 3.9e-15 86.7 259 32.0
Sed0014520 Sechium edule HOM05D005864 ORTHO05D006770 8.7e-15 85.5 243 35.4
CAN.G80.20 Capsicum annuum HOM05D005864 ORTHO05D006770 1.1e-14 85.1 280 30.4
CARHR097800 Cardamine hirsuta HOM05D005864 ORTHO05D006770 1.1e-14 85.1 242 33.9
CsaV3_7G003760 Cucumis sativus L. HOM05D005864 ORTHO05D006770 1.1e-14 85.1 242 33.9
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-14 85.1 268 32.5
Nitab4.5_0006207g0020 Nicotiana tabacum HOM05D005864 ORTHO05D006770 1.5e-14 84.7 271 31.7
Lalb_Chr19g0135701 Lupinus albus HOM05D005864 ORTHO05D006770 2.5e-14 84.0 342 30.1
Solyc12g005770.3 Solanum lycopersicum HOM05D005864 ORTHO05D006770 3.3e-14 83.6 315 29.2
BcaB04g20556 Brassica carinata HOM05D005864 ORTHO05D006770 4.3e-14 83.2 344 29.9
SalBow7G0586 Salvia bowleyana HOM05D005864 ORTHO05D006770 7.4e-14 82.4 350 31.1
Sopen12g001690 Solanum pennellii HOM05D005864 ORTHO05D006770 9.6e-14 82.0 315 29.2
SGA_v2.0_scaffold70G23416 Striga asiatica HOM05D005864 ORTHO05D006770 1.6e-13 81.3 269 32.7
arahy.Tifrunner.gnm1.ann1.UG5YAZ Arachis hypogaea HOM05D005864 ORTHO05D006770 2.8e-13 80.5 283 29.7
Lsat_1_v5_gn_3_43700 Lactuca sativa HOM05D005864 ORTHO05D006770 2.8e-13 80.5 268 32.5
BcaC09g49121 Brassica carinata HOM05D005864 ORTHO05D006770 3.7e-13 80.1 242 33.9
MSTRG.6547 Avicennia marina HOM05D005864 ORTHO05D006770 4.8e-13 79.7 242 34.7
Sp3g19810 Schrenkiella parvula HOM05D005864 ORTHO05D006770 4.8e-13 79.7 279 32.6
unitig_85.g27303 Utricularia gibba HOM05D005864 ORTHO05D006770 8.1e-13 79.0 245 31.0
arahy.Tifrunner.gnm1.ann1.VAE2IM Arachis hypogaea HOM05D005864 ORTHO05D006770 2.4e-12 77.4 241 32.8
CSS0029042 Camellia sinensis var. sinensis HOM05D005864 ORTHO05D006770 3.1e-12 77.0 117 38.5
Actinidia12503 Actinidia chinensis HOM05D005864 ORTHO05D006770 4.0e-12 76.6 334 28.4
AT3G21810 Arabidopsis thaliana HOM05D005864 ORTHO05D006770 5.3e-12 76.3 254 33.1
A01p33130 Brassica napus HOM05D005864 ORTHO05D006770 6.9e-12 75.9 324 31.5
Peaxi162Scf00012g03212 Petunia axillaris HOM05D005864 ORTHO05D006770 9.0e-12 75.5 332 28.9
THA.LOC104809073 Tarenaya hassleriana HOM05D005864 ORTHO05D006770 9.0e-12 75.5 251 33.1
AagrBONN_evm.TU.Sc2ySwM_369.130 Anthoceros agrestis HOM05D005864 ORTHO05D006770 1.2e-11 75.1 222 35.6
ClCG02G001780 Citrullus lanatus HOM05D005864 ORTHO05D006770 1.2e-11 75.1 253 32.0
BolC1t04192H Brassica oleracea HOM05D005864 ORTHO05D006770 1.5e-11 74.7 242 33.1
Ca_19101_v3 Cicer arietinum L. HOM05D005864 ORTHO05D006770 2.0e-11 74.3 330 31.2
DCAR_021187 Daucus carota HOM05D005864 ORTHO05D006770 2.0e-11 74.3 185 33.5
PGSC0003DMG401024331 Solanum tuberosum HOM05D005864 ORTHO05D006770 3.4e-11 73.6 303 28.1
COL.COLO4_12982 Corchorus olitorius HOM05D005864 ORTHO05D006770 5.8e-11 72.8 297 31.0
VMungo1127G2082 Vigna mungo HOM05D005864 ORTHO05D006770 5.8e-11 72.8 296 30.1
SEGI_09449 Sequoiadendron giganteum HOM05D005864 ORTHO05D006770 1.0e-10 72.0 261 29.9
Aa31LG8G8400 Aethionema arabicum HOM05D005864 ORTHO05D006770 3.8e-10 70.1 240 30.8
Sabra07G0098400 Salix brachista HOM05D005864 ORTHO05D006770 1.4e-09 68.2 221 33.9
Ciclev10015598m.g Citrus clementina HOM05D005864 ORTHO05D006770 2.5e-09 67.4 244 32.4
HanXRQChr07g0191611 Helianthus annuus HOM05D005864 ORTHO05D006770 3.2e-09 67.0 250 30.8
FvH4_6g43530 Fragaria vesca HOM05D005864 ORTHO05D006770 5.5e-09 66.2 345 28.4
AUR62025062 Chenopodium quinoa HOM05D005864 ORTHO05D006770 2.7e-08 63.9 245 28.2
Duzib052G0164 Durio zibethinus HOM05D005864 ORTHO05D006770 6.0e-08 62.8 243 31.3
Cc05_g05040 Coffea canephora HOM05D005864 ORTHO05D006770 7.9e-08 62.4 257 29.2
TAR626G0331 Trochodendron aralioides HOM05D005864 ORTHO05D006770 7.9e-08 62.4 72 48.6
Carub.0003s2189 Capsella rubella HOM05D005864 ORTHO05D006770 2.3e-07 60.8 315 29.5
AUR62037142 Chenopodium quinoa HOM05D005864 ORTHO05D006770 2.3e-07 60.8 270 27.4
Prupe.3G220100 Prunus persica HOM05D005864 ORTHO05D006770 3.9e-07 60.1 240 30.8
Mapoly0099s0053 Marchantia polymorpha HOM05D005864 ORTHO05D006770 6.7e-07 59.3 255 30.2
FAN14G4164 Fragaria x ananassa HOM05D005864 ORTHO05D006770 1.1e-06 58.5 199 31.7
Cpa.g.sc8.234 Carica papaya HOM05D005864 ORTHO05D006770 1.5e-06 58.2 269 30.5
Glyma.12G101400 Glycine max HOM05D005864 ORTHO05D006770 1.5e-06 58.2 292 27.4


User provided reference genes

Program Settings