Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb271340 Zea mays HOM05D009723 ORTHO05D014671 1.8e-167 592.4 287 100.0
Zm00001eb271380 Zea mays HOM05D009723 ORTHO05D014671 5.3e-159 564.3 279 97.8
Zm00001eb271360 Zea mays HOM05D009723 ORTHO05D014671 2.5e-156 555.4 269 98.9
Zm00001eb271330 Zea mays HOM05D009723 ORTHO05D014671 4.4e-137 491.5 271 86.3
Zm00001eb172310 Zea mays HOM05D009723 ORTHO05D014671 8.5e-64 248.1 287 50.2
Zm00001eb172340 Zea mays HOM05D009723 ORTHO05D014671 1.7e-59 233.8 296 45.9
Zm00001eb375550 Zea mays HOM05D009723 ORTHO05D014671 7.7e-57 224.9 291 44.7
Zm00001eb376010 Zea mays HOM05D009723 ORTHO05D014671 9.4e-47 191.4 279 43.4
Zm00001eb442410 Zea mays HOM05D009723 ORTHO05D441393 1.2e-36 157.9 74 100.0
Zm00001eb375960 Zea mays HOM05D009723 ORTHO05D014671 7.5e-36 155.2 280 38.9
Os05g0115500 Oryza sativa ssp. japonica HOM05D009723 ORTHO05D037178 7.5e-28 128.6 284 36.3
Os05g0345700 Oryza sativa ssp. japonica HOM05D009723 ORTHO05D037178 9.8e-28 128.3 296 34.5
Os06g0161100 Oryza sativa ssp. japonica HOM05D009723 ORTHO05D014671 4.8e-27 125.9 272 34.9
Zm00001eb355600 Zea mays HOM05D009723 ORTHO05D037178 1.4e-26 124.4 285 34.0
Zm00001eb373770 Zea mays HOM05D009723 ORTHO05D014671 1.4e-21 107.8 289 32.2
Os06g0161900 Oryza sativa ssp. japonica HOM05D009723 ORTHO05D014671 4.5e-17 92.8 281 31.3
Os06g0162100 Oryza sativa ssp. japonica HOM05D009723 ORTHO05D014671 1.7e-16 90.9 285 31.9
Zm00001eb376060 Zea mays HOM05D009723 ORTHO05D444291 2.9e-16 90.1 174 36.2
Os08g0164300 Oryza sativa ssp. japonica HOM05D009723 ORTHO05D300131 3.9e-16 89.7 301 30.6
Zm00001eb055580 Zea mays HOM05D009723 ORTHO05D445506 2.5e-15 87.0 303 31.0
Os06g0161800 Oryza sativa ssp. japonica HOM05D009723 ORTHO05D014671 1.2e-14 84.7 292 32.2
Nitab4.5_0000408g0120 Nicotiana tabacum HOM05D001102 ORTHO05D001018 2.0e-12 77.4 306 27.8
Zm00001eb442420 Zea mays HOM05D009723 ORTHO05D444938 1.7e-11 74.3 37 97.3
Zm00001eb376090 Zea mays HOM05D009723 ORTHO05D445930 2.3e-08 63.9 163 31.9
Zm00001eb376070 Zea mays HOM05D009723 ORTHO05D446400 3.0e-08 63.5 168 31.5
AL22U10080 Arabidopsis lyrata HOM05D001102 ORTHO05D001018 1.1e-07 61.6 159 32.1
A07p13590 Brassica napus HOM05D001102 ORTHO05D001018 3.3e-07 60.1 290 21.7
C02p27060 Brassica napus HOM05D001102 ORTHO05D001018 3.3e-07 60.1 160 30.6
CARHR062980 Cardamine hirsuta HOM05D001102 ORTHO05D001018 3.3e-07 60.1 161 31.7
BcaC03g15142 Brassica carinata HOM05D001102 ORTHO05D001018 5.6e-07 59.3 160 30.6
A02p16220 Brassica napus HOM05D001102 ORTHO05D001018 1.6e-06 57.8 160 30.0
BraA02t06682Z Brassica rapa HOM05D001102 ORTHO05D001018 1.6e-06 57.8 160 30.0
BcaB03g14768 Brassica carinata HOM05D001102 ORTHO05D001018 2.1e-06 57.4 159 30.8
Carub.0002s1660 Capsella rubella HOM05D001102 ORTHO05D001018 2.1e-06 57.4 160 30.0


User provided reference genes

Program Settings