Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb271330 Zea mays HOM05D009723 ORTHO05D014671 3.0e-170 601.7 286 100.0
Zm00001eb271340 Zea mays HOM05D009723 ORTHO05D014671 5.7e-137 491.1 271 86.3
Zm00001eb271360 Zea mays HOM05D009723 ORTHO05D014671 3.1e-135 485.3 270 85.9
Zm00001eb271380 Zea mays HOM05D009723 ORTHO05D014671 3.8e-133 478.4 271 84.9
Zm00001eb172310 Zea mays HOM05D009723 ORTHO05D014671 1.3e-64 250.8 294 50.3
Zm00001eb172340 Zea mays HOM05D009723 ORTHO05D014671 6.3e-59 231.9 305 46.6
Zm00001eb375550 Zea mays HOM05D009723 ORTHO05D014671 1.4e-55 220.7 290 46.9
Zm00001eb376010 Zea mays HOM05D009723 ORTHO05D014671 5.0e-48 195.7 291 43.0
Zm00001eb375960 Zea mays HOM05D009723 ORTHO05D014671 1.9e-39 167.2 294 40.1
Zm00001eb442410 Zea mays HOM05D009723 ORTHO05D441393 1.5e-31 141.0 90 78.9
Os05g0345700 Oryza sativa ssp. japonica HOM05D009723 ORTHO05D037178 2.6e-28 130.2 296 34.5
Zm00001eb355600 Zea mays HOM05D009723 ORTHO05D037178 2.6e-28 130.2 292 35.6
Os05g0115500 Oryza sativa ssp. japonica HOM05D009723 ORTHO05D037178 3.1e-26 123.2 282 35.1
Os06g0161100 Oryza sativa ssp. japonica HOM05D009723 ORTHO05D014671 2.0e-25 120.6 283 35.3
Zm00001eb373770 Zea mays HOM05D009723 ORTHO05D014671 5.5e-23 112.5 302 31.1
Os06g0161900 Oryza sativa ssp. japonica HOM05D009723 ORTHO05D014671 3.7e-19 99.8 277 33.9
Os06g0162100 Oryza sativa ssp. japonica HOM05D009723 ORTHO05D014671 3.5e-17 93.2 282 34.0
Zm00001eb055580 Zea mays HOM05D009723 ORTHO05D445506 3.5e-17 93.2 305 30.5
Zm00001eb376060 Zea mays HOM05D009723 ORTHO05D444291 5.9e-17 92.4 174 38.5
Os06g0161800 Oryza sativa ssp. japonica HOM05D009723 ORTHO05D014671 1.0e-16 91.7 294 34.0
Zm00001eb442420 Zea mays HOM05D009723 ORTHO05D444938 2.2e-11 73.9 37 94.6
Peaxi162Scf00700g00729 Petunia axillaris HOM05D001102 ORTHO05D001018 5.4e-10 69.3 273 26.0
Peaxi162Scf00026g02218 Petunia axillaris HOM05D001102 ORTHO05D001018 9.2e-10 68.6 302 27.2
Zm00001eb376090 Zea mays HOM05D009723 ORTHO05D445930 4.5e-09 66.2 106 39.6
AL22U10080 Arabidopsis lyrata HOM05D001102 ORTHO05D001018 5.9e-09 65.9 160 31.9
C02p27060 Brassica napus HOM05D001102 ORTHO05D001018 5.9e-09 65.9 157 33.1
CARHR062980 Cardamine hirsuta HOM05D001102 ORTHO05D001018 1.3e-08 64.7 158 32.9
BcaC03g15142 Brassica carinata HOM05D001102 ORTHO05D001018 2.3e-08 63.9 157 32.5
Carub.0002s1660 Capsella rubella HOM05D001102 ORTHO05D001018 3.8e-08 63.2 158 32.9
A02p16220 Brassica napus HOM05D001102 ORTHO05D001018 6.6e-08 62.4 157 31.8
BraA02t06682Z Brassica rapa HOM05D001102 ORTHO05D001018 6.6e-08 62.4 157 31.8
BcaB03g14768 Brassica carinata HOM05D001102 ORTHO05D001018 1.1e-07 61.6 157 31.2
Zm00001eb033370 Zea mays HOM05D009723 ORTHO05D445769 7.3e-07 58.9 97 39.2
Zm00001eb376070 Zea mays HOM05D009723 ORTHO05D446400 7.3e-07 58.9 168 31.0
Aa31LG4G10910 Aethionema arabicum HOM05D001102 ORTHO05D001018 9.5e-07 58.5 161 29.2
ClCG10G014790 Citrullus lanatus HOM05D001102 ORTHO05D001018 1.6e-06 57.8 159 31.4


User provided reference genes

Program Settings