Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb268530 Zea mays HOM05D006644 ORTHO05D008285 3.1e-148 528.5 270 100.0
Zm00001eb268550 Zea mays HOM05D006644 ORTHO05D008285 1.2e-139 500.0 269 94.4
Zm00001eb201480 Zea mays HOM05D006644 ORTHO05D008285 8.3e-130 467.2 260 91.5
Os06g0104100 Oryza sativa ssp. japonica HOM05D006644 ORTHO05D008285 5.3e-116 421.4 267 78.7
Zm00001eb270010 Zea mays HOM05D006644 ORTHO05D008285 1.3e-98 363.6 196 92.3
MBI05_g39054_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 2.1e-96 356.3 271 66.1
TAR629G2969 Trochodendron aralioides HOM05D006644 ORTHO05D008285 1.5e-94 350.1 265 66.8
Nitab4.5_0004059g0010 Nicotiana tabacum HOM05D006644 ORTHO05D008285 4.3e-94 348.6 265 66.0
Aqoxy2G01551 Aquilegia oxysepala HOM05D006644 ORTHO05D008285 7.4e-94 347.8 264 65.2
Ca_06699_v3 Cicer arietinum L. HOM05D006644 ORTHO05D008285 9.6e-94 347.4 270 65.2
CSS0031485 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.1e-93 346.3 271 66.1
HPP92_012043 Vanilla planifolia HOM05D006644 ORTHO05D008285 4.8e-93 345.1 264 65.5
CSS0029694 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 8.2e-93 344.4 271 65.7
Oeu046413.1 Olea europaea HOM05D006644 ORTHO05D008285 8.2e-93 344.4 265 66.8
Oeu046415.1 Olea europaea HOM05D006644 ORTHO05D008285 8.2e-93 344.4 265 66.8
Medtr5g012060 Medicago truncatula HOM05D006644 ORTHO05D008285 1.1e-92 344.0 270 65.2
PGSC0003DMG400012507 Solanum tuberosum HOM05D006644 ORTHO05D008285 1.1e-92 344.0 265 65.3
Cfa012781 Carpinus fangiana HOM05D006644 ORTHO05D008285 1.4e-92 343.6 265 67.2
ClCG10G003030 Citrullus lanatus HOM05D006644 ORTHO05D008285 1.4e-92 343.6 264 65.9
Haze_08586 Corylus avellana HOM05D006644 ORTHO05D008285 1.4e-92 343.6 265 67.2
Hma1.2p1_0123F.1_g057970 Hydrangea macrophylla HOM05D006644 ORTHO05D008285 1.4e-92 343.6 263 65.8
CAN.G1394.30 Capsicum annuum HOM05D006644 ORTHO05D008285 1.8e-92 343.2 271 64.6
CiPaw.12G106200 Carya illinoinensis HOM05D006644 ORTHO05D008285 1.8e-92 343.2 271 66.4
Nn4g25799 Nelumbo nucifera HOM05D006644 ORTHO05D008285 2.4e-92 342.8 265 65.3
Nitab4.5_0001707g0070 Nicotiana tabacum HOM05D006644 ORTHO05D008285 3.1e-92 342.4 265 65.3
Sopen08g003400 Solanum pennellii HOM05D006644 ORTHO05D008285 5.3e-92 341.7 265 64.9
MELO3C013973.2 Cucumis melo HOM05D006644 ORTHO05D008285 9.0e-92 340.9 264 65.5
CsaV3_3G003070 Cucumis sativus L. HOM05D006644 ORTHO05D008285 9.0e-92 340.9 264 65.5
QL07p036208 Quercus lobata HOM05D006644 ORTHO05D008285 1.5e-91 340.1 265 65.3
Atru.chr12.1357 Acer truncatum HOM05D006644 ORTHO05D008285 2.0e-91 339.7 264 65.5
Actinidia27444 Actinidia chinensis HOM05D006644 ORTHO05D008285 2.6e-91 339.3 265 65.7
Glyma.13G075600 Glycine max HOM05D006644 ORTHO05D008285 2.6e-91 339.3 270 63.0
Manes.02G035200 Manihot esculenta HOM05D006644 ORTHO05D008285 2.6e-91 339.3 264 65.9
DCAR_021556 Daucus carota HOM05D006644 ORTHO05D008285 3.4e-91 339.0 271 65.7
Sed0006360 Sechium edule HOM05D006644 ORTHO05D008285 4.5e-91 338.6 263 65.4
COL.COLO4_37229 Corchorus olitorius HOM05D000927 ORTHO05D000850 5.8e-91 338.2 263 66.2
Solyc08g007440.2 Solanum lycopersicum HOM05D006644 ORTHO05D008285 5.8e-91 338.2 263 65.0
Lj3P740T25 Lonicera japonica HOM05D006644 ORTHO05D008285 7.6e-91 337.8 265 64.5
TWI81G0884 Tripterygium wilfordii HOM05D006644 ORTHO05D008285 7.6e-91 337.8 264 65.5
Actinidia05183 Actinidia chinensis HOM05D006644 ORTHO05D008285 1.0e-90 337.4 271 66.1
TPR.G25884 Trifolium pratense HOM05D006644 ORTHO05D008285 1.3e-90 337.0 269 62.8
MSTRG.22191 Avicennia marina HOM05D006644 ORTHO05D008285 2.2e-90 336.3 265 65.7
Psat2g178760 Pisum sativum HOM05D006644 ORTHO05D008285 2.9e-90 335.9 269 62.1
arahy.Tifrunner.gnm1.ann1.FSA67V Arachis hypogaea HOM05D006644 ORTHO05D008285 3.8e-90 335.5 268 63.8
arahy.Tifrunner.gnm1.ann1.TVS5XD Arachis hypogaea HOM05D006644 ORTHO05D008285 3.8e-90 335.5 268 63.8
Potri.001G119700 Populus trichocarpa HOM05D006644 ORTHO05D008285 5.0e-90 335.1 264 65.5
Thecc.03G258000 Theobroma cacao HOM05D006644 ORTHO05D008285 5.0e-90 335.1 263 65.0
unitig_0.g533 Utricularia gibba HOM05D006644 ORTHO05D008285 5.0e-90 335.1 264 65.2
Gohir.A03G014500 Gossypium hirsutum HOM05D006644 ORTHO05D008285 6.5e-90 334.7 264 65.2
Gorai.003G168800 Gossypium raimondii HOM05D006644 ORTHO05D008285 6.5e-90 334.7 265 65.7
Lalb_Chr05g0214591 Lupinus albus HOM05D006644 ORTHO05D008285 6.5e-90 334.7 264 63.3
Gohir.D03G160300 Gossypium hirsutum HOM05D006644 ORTHO05D008285 8.4e-90 334.3 265 65.7
Hund11575 Selenicereus undatus HOM05D006644 ORTHO05D008285 8.4e-90 334.3 263 63.1
Sabra01G0092400 Salix brachista HOM05D006644 ORTHO05D008285 1.9e-89 333.2 264 64.8
Eucgr.E00462 Eucalyptus grandis HOM05D006644 ORTHO05D008285 2.5e-89 332.8 269 64.3
Phvul.011G156400 Phaseolus vulgaris HOM05D006644 ORTHO05D008285 5.5e-89 331.6 270 61.9
Duzib068G0588 Durio zibethinus HOM05D006644 ORTHO05D008285 7.1e-89 331.3 263 64.6
VMungo0720G3176 Vigna mungo HOM05D006644 ORTHO05D008285 1.6e-88 330.1 270 61.5
Sc01g0009310 Simmondsia chinensis HOM05D006644 ORTHO05D008285 3.5e-88 328.9 262 63.4
Lsat_1_v5_gn_4_110420 Lactuca sativa HOM05D006644 ORTHO05D008285 4.6e-88 328.6 271 62.4
Lj2g0023084 Lotus japonicus HOM05D006644 ORTHO05D008285 4.6e-88 328.6 270 62.2
Ciclev10024149m.g Citrus clementina HOM05D006644 ORTHO05D008285 1.3e-87 327.0 264 63.6
Prupe.5G076400 Prunus persica HOM05D006644 ORTHO05D008285 1.3e-87 327.0 265 63.0
Cpa.g.sc29.104 Carica papaya HOM05D006644 ORTHO05D008285 1.8e-87 326.6 264 64.4
Migut.E00967 Erythranthe guttata HOM05D006644 ORTHO05D008285 2.3e-87 326.2 265 65.7
CANSAT21G2263 Cannabis sativa HOM05D006644 ORTHO05D008285 3.0e-87 325.9 269 63.6
MD04G1082000 Malus domestica HOM05D006644 ORTHO05D008285 3.9e-87 325.5 265 62.3
THA.LOC104818444 Tarenaya hassleriana HOM05D006644 ORTHO05D008285 1.1e-86 323.9 266 62.4
FvH4_5g00371 Fragaria vesca HOM05D006644 ORTHO05D008285 1.9e-86 323.2 265 63.0
FAN08G3361 Fragaria x ananassa HOM05D006644 ORTHO05D008285 1.9e-86 323.2 265 63.0
Cc08_g13030 Coffea canephora HOM05D006644 ORTHO05D008285 2.5e-86 322.8 271 62.0
ECA232G2550 Erigeron canadensis HOM05D006644 ORTHO05D008285 3.3e-86 322.4 271 62.4
Migut.E01682 Erythranthe guttata HOM05D006644 ORTHO05D008285 4.3e-86 322.0 265 64.5
RcHm_v2.0_Chr7g0202141 Rosa chinensis HOM05D006644 ORTHO05D008285 5.7e-86 321.6 265 62.6
CDE05G2087 Ceratophyllum demersum HOM05D006644 ORTHO05D008285 7.4e-86 321.2 270 59.6
BcaC04g22441 Brassica carinata HOM05D006644 ORTHO05D008285 1.6e-85 320.1 268 61.9
BolC9t54841H Brassica oleracea HOM05D006644 ORTHO05D008285 1.6e-85 320.1 268 61.9
Thhalv10023606m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 2.8e-85 319.3 273 61.5
FAN04G2033 Fragaria x ananassa HOM05D006644 ORTHO05D008285 2.8e-85 319.3 265 62.3
HanXRQChr16g0502401 Helianthus annuus HOM05D006644 ORTHO05D008285 4.8e-85 318.5 271 60.9
BcaB07g31354 Brassica carinata HOM05D006644 ORTHO05D008285 6.3e-85 318.2 268 61.2
SalBow7G1671 Salvia bowleyana HOM05D006644 ORTHO05D008285 6.3e-85 318.2 260 63.1
C09p19300 Brassica napus HOM05D006644 ORTHO05D008285 8.2e-85 317.8 268 61.6
BraA09t37241Z Brassica rapa HOM05D006644 ORTHO05D008285 1.1e-84 317.4 268 61.6
AT1G62730 Arabidopsis thaliana HOM05D006644 ORTHO05D008285 1.4e-84 317.0 273 61.5
A09p16050 Brassica napus HOM05D006644 ORTHO05D008285 1.4e-84 317.0 268 61.2
CARHR049110 Cardamine hirsuta HOM05D006644 ORTHO05D008285 4.1e-84 315.5 273 60.1
AL2G13060 Arabidopsis lyrata HOM05D006644 ORTHO05D008285 5.3e-84 315.1 273 61.2
Dinv39097 Davidia involucrata HOM05D006644 ORTHO05D008285 9.0e-84 314.3 249 65.5
Sp2g01910 Schrenkiella parvula HOM05D006644 ORTHO05D008285 1.2e-83 313.9 272 60.3
Aa31LG2G270 Aethionema arabicum HOM05D006644 ORTHO05D008285 3.4e-83 312.4 273 60.1
Carub.0002s0225 Capsella rubella HOM05D006644 ORTHO05D008285 5.9e-83 311.6 273 60.4
SGA_v2.0_scaffold13G06437 Striga asiatica HOM05D006644 ORTHO05D008285 7.7e-83 311.2 276 59.4
ATR0789G127 Amborella trichopoda HOM05D006644 ORTHO05D008285 2.2e-82 309.7 266 61.3
AUR62010133 Chenopodium quinoa HOM05D006644 ORTHO05D008285 7.4e-78 294.7 231 64.1
Ah.12g056410 Amaranthus hybridus HOM05D000927 ORTHO05D000850 6.3e-77 291.6 231 63.2
SEGI_02663 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 2.3e-71 273.1 263 54.4
SEGI_03161 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 2.3e-71 273.1 263 54.4
GSVIVG01000849001 Vitis vinifera HOM05D006644 ORTHO05D008285 2.0e-70 270.0 229 60.7
CSS0049876 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.0e-67 260.0 198 65.2
Lalb_Chr16g0379761 Lupinus albus HOM05D006644 ORTHO05D008285 4.5e-67 258.8 213 61.0
Mapoly0004s0255 Marchantia polymorpha HOM05D006644 ORTHO05D008285 1.8e-63 246.9 265 51.7
Pp3c14_3830 Physcomitrium patens HOM05D006644 ORTHO05D008285 1.3e-61 240.7 270 50.4
Peaxi162Scf00102g01130 Petunia axillaris HOM05D006644 ORTHO05D008285 6.1e-56 221.9 271 49.8
SMO358G0371 Selaginella moellendorffii HOM05D006644 ORTHO05D008285 2.3e-55 219.9 263 47.1
CBR_g24133 Chara braunii HOM05D006644 ORTHO05D008285 8.5e-50 201.4 281 41.6
Thhalv10029515m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 1.7e-45 187.2 269 44.2
ATR0789G122 Amborella trichopoda HOM05D006644 ORTHO05D008285 2.9e-42 176.4 178 56.7
AagrBONN_evm.TU.Sc2ySwM_362.950 Anthoceros agrestis HOM05D006644 ORTHO05D008285 5.7e-38 162.2 163 48.5
CSS0012505 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.4e-36 157.5 144 60.4
CSS0030048 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.4e-36 157.5 145 60.0
CSS0030367 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.3e-34 151.0 145 57.9
MCO14G155 Micromonas commoda HOM05D006644 ORTHO05D008285 6.6e-34 148.7 281 37.0
Thhalv10022385m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 1.9e-33 147.1 103 66.0
CSS0018627 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.6e-32 142.9 145 57.2
PRCOL_00006235 Prasinoderma coloniale HOM05D006644 ORTHO05D008285 4.9e-29 132.5 278 34.5
CSS0020508 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 9.2e-28 128.3 93 63.4
Cre03.g194300 Chlamydomonas reinhardtii HOM05D006644 ORTHO05D008285 2.3e-26 123.6 323 29.4
Cfa023787 Carpinus fangiana HOM05D006644 ORTHO05D008285 5.2e-23 112.5 279 32.3
QL12p014121 Quercus lobata HOM05D006644 ORTHO05D008285 1.4e-20 104.4 261 33.0
BcaC06g31907 Brassica carinata HOM05D006644 ORTHO05D008285 9.2e-20 101.7 264 33.3
MBI05_g43358_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 1.0e-10 71.6 42 71.4
MBI05_g43359_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 8.1e-08 62.0 44 70.5


User provided reference genes

Program Settings