Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb049500 Zea mays HOM05D000855 ORTHO05D018071 6.2e-55 217.2 111 100.0
Zm00001eb061660 Zea mays HOM05D000855 ORTHO05D018071 6.2e-55 217.2 111 100.0
Zm00001eb264800 Zea mays HOM05D000855 ORTHO05D018071 6.2e-55 217.2 111 100.0
Zm00001eb402610 Zea mays HOM05D000855 ORTHO05D018071 9.6e-40 166.8 97 89.7
Zm00001eb139650 Zea mays HOM05D000855 ORTHO05D018071 2.8e-39 165.2 104 85.6
Zm00001eb362080 Zea mays HOM05D000855 ORTHO05D018071 1.6e-31 139.4 89 84.3
Os11g0303500 Oryza sativa ssp. japonica HOM05D000855 ORTHO05D018071 1.3e-28 129.8 94 73.4
Zm00001eb371060 Zea mays HOM05D000855 ORTHO05D018071 3.8e-20 101.7 61 90.2
Zm00001eb083550 Zea mays HOM05D000855 ORTHO05D018071 1.1e-11 73.6 51 72.5
HPP92_012068 Vanilla planifolia HOM05D000855 ORTHO05D002321 2.5e-11 72.4 74 47.3
Haze_20651 Corylus avellana HOM05D000855 ORTHO05D002321 7.2e-11 70.9 91 44.0
MBI14_g26603_MAGBIO Magnolia biondii HOM05D000855 ORTHO05D002321 1.2e-10 70.1 90 43.3
Zm00001eb351570 Zea mays HOM05D000855 ORTHO05D002321 1.2e-10 70.1 93 38.7
Lj3C979T7 Lonicera japonica HOM05D000855 ORTHO05D002321 2.7e-10 68.9 93 43.0
Zm00001eb289850 Zea mays HOM05D000855 ORTHO05D002321 3.6e-10 68.6 87 41.4
Ciclev10010946m.g Citrus clementina HOM05D000855 ORTHO05D002321 1.4e-09 66.6 85 44.7
Manes.08G003300 Manihot esculenta HOM05D000855 ORTHO05D002321 1.8e-09 66.2 81 44.4
TAR623G1395 Trochodendron aralioides HOM05D000855 ORTHO05D002321 1.8e-09 66.2 91 40.7
Hma1.2p1_0111F.1_g053880 Hydrangea macrophylla HOM05D000855 ORTHO05D002321 2.3e-09 65.9 78 42.3
QL07p045288 Quercus lobata HOM05D000855 ORTHO05D002321 2.3e-09 65.9 98 39.8
Dinv35708 Davidia involucrata HOM05D000855 ORTHO05D008530 3.0e-09 65.5 78 42.3
PSO210G7506 Papaver somniferum HOM05D000855 ORTHO05D002321 3.0e-09 65.5 81 44.4
TWI74G1097 Tripterygium wilfordii HOM05D000855 ORTHO05D002321 3.0e-09 65.5 81 43.2
GSVIVG01025624001 Vitis vinifera HOM05D000855 ORTHO05D002321 3.9e-09 65.1 78 42.3
Cpa.g.sc114.40 Carica papaya HOM05D000855 ORTHO05D002321 5.1e-09 64.7 73 43.8
Nitab4.5_0001142g0090 Nicotiana tabacum HOM05D000855 ORTHO05D002321 8.8e-09 63.9 97 39.2
Actinidia04696 Actinidia chinensis HOM05D000855 ORTHO05D002321 1.1e-08 63.5 97 40.2
Actinidia19715 Actinidia chinensis HOM05D000855 ORTHO05D002321 1.1e-08 63.5 97 40.2
AUR62039783 Chenopodium quinoa HOM05D000855 ORTHO05D002321 1.1e-08 63.5 78 43.6
Nitab4.5_0003895g0030 Nicotiana tabacum HOM05D000855 ORTHO05D002321 1.1e-08 63.5 78 44.9
Medtr1g066890 Medicago truncatula HOM05D000855 ORTHO05D002321 1.9e-08 62.8 78 42.3
PSO210G3519 Papaver somniferum HOM05D000855 ORTHO05D002321 1.9e-08 62.8 84 44.0
CiPaw.09G180000 Carya illinoinensis HOM05D000855 ORTHO05D002321 2.5e-08 62.4 73 43.8
TWI77G0883 Tripterygium wilfordii HOM05D000855 ORTHO05D002321 2.5e-08 62.4 86 41.9
Atru.chr8.2555 Acer truncatum HOM05D000855 ORTHO05D002321 3.3e-08 62.0 86 44.2
CSS0000157 Camellia sinensis var. sinensis HOM05D000855 ORTHO05D002321 4.3e-08 61.6 91 40.7
Ca_11449_v3 Cicer arietinum L. HOM05D000855 ORTHO05D002321 5.7e-08 61.2 77 41.6
Duzib093G2126 Durio zibethinus HOM05D000855 ORTHO05D002321 5.7e-08 61.2 91 44.0
Glyma.10G049300 Glycine max HOM05D000855 ORTHO05D002321 5.7e-08 61.2 77 41.6
FAN14G3376 Fragaria x ananassa HOM05D000855 ORTHO05D002321 7.4e-08 60.8 95 38.9
Oeu026843.1 Olea europaea HOM05D000855 ORTHO05D002321 7.4e-08 60.8 77 41.6
Sabra06G0103400 Salix brachista HOM05D000855 ORTHO05D002321 7.4e-08 60.8 93 34.4
TPR.G30257 Trifolium pratense HOM05D000855 ORTHO05D002321 7.4e-08 60.8 78 41.0
vmacro20062 Vaccinium macrocarpon HOM05D000855 ORTHO05D002321 7.4e-08 60.8 78 39.7
AUR62040020 Chenopodium quinoa HOM05D000855 ORTHO05D002321 9.7e-08 60.5 78 41.0
AUR62044639 Chenopodium quinoa HOM05D000855 ORTHO05D002321 9.7e-08 60.5 78 41.0
Lj5g0028198 Lotus japonicus HOM05D000855 ORTHO05D002321 9.7e-08 60.5 77 41.6
PGR004G1993 Punica granatum HOM05D000855 ORTHO05D002321 9.7e-08 60.5 86 38.4
TAR633G0412 Trochodendron aralioides HOM05D000855 ORTHO05D002321 9.7e-08 60.5 91 38.5
FvH4_6g15320 Fragaria vesca HOM05D000855 ORTHO05D002321 1.3e-07 60.1 95 38.9
FAN05G0228 Fragaria x ananassa HOM05D000855 ORTHO05D002321 1.3e-07 60.1 91 40.7
FAN05G3912 Fragaria x ananassa HOM05D000855 ORTHO05D017897 1.3e-07 60.1 91 40.7
Gohir.A01G217300 Gossypium hirsutum HOM05D000855 ORTHO05D002321 1.7e-07 59.7 73 45.2
Gorai.002G250400 Gossypium raimondii HOM05D000855 ORTHO05D002321 1.7e-07 59.7 98 39.8
RhsimUnG0118400 Rhododendron simsii HOM05D000855 ORTHO05D002321 1.7e-07 59.7 79 40.5
Hund20160 Selenicereus undatus HOM05D000855 ORTHO05D002321 1.7e-07 59.7 84 38.1
AL6G12240 Arabidopsis lyrata HOM05D000855 ORTHO05D002321 2.2e-07 59.3 73 42.5
Gohir.D01G206000 Gossypium hirsutum HOM05D000855 ORTHO05D002321 2.2e-07 59.3 73 45.2
Oeu007703.1 Olea europaea HOM05D000855 ORTHO05D002321 2.2e-07 59.3 80 37.5
THA.LOC104826984 Tarenaya hassleriana HOM05D000855 ORTHO05D002321 2.2e-07 59.3 73 43.8
TAR636G1494 Trochodendron aralioides HOM05D000855 ORTHO05D002321 2.2e-07 59.3 81 38.3
Medtr2g104120 Medicago truncatula HOM05D000855 ORTHO05D002321 2.8e-07 58.9 78 41.0
PSO339G4758 Papaver somniferum HOM05D000855 ORTHO05D002321 2.8e-07 58.9 81 39.5
PSO384G0136 Papaver somniferum HOM05D000855 ORTHO05D002321 3.7e-07 58.5 77 40.3
RcHm_v2.0_Chr3g0468791 Rosa chinensis HOM05D000855 ORTHO05D002321 3.7e-07 58.5 91 38.5
VMungo0720G0832 Vigna mungo HOM05D000855 ORTHO05D002321 3.7e-07 58.5 77 40.3
ATR1159G033 Amborella trichopoda HOM05D000855 ORTHO05D002321 4.8e-07 58.2 62 43.5
CAN.G608.13 Capsicum annuum HOM05D000855 ORTHO05D002321 4.8e-07 58.2 86 41.9
FAN09G3879 Fragaria x ananassa HOM05D000855 ORTHO05D002321 4.8e-07 58.2 91 40.7
Glyma.13G137000 Glycine max HOM05D000855 ORTHO05D002321 4.8e-07 58.2 77 40.3
Lalb_Chr21g0314651 Lupinus albus HOM05D000855 ORTHO05D002321 4.8e-07 58.2 77 42.9
Prupe.6G241400 Prunus persica HOM05D000855 ORTHO05D002321 4.8e-07 58.2 91 40.7
Thecc.05G053800 Theobroma cacao HOM05D000855 ORTHO05D002321 4.8e-07 58.2 91 40.7
Glyma.20G198402 Glycine max HOM05D000855 ORTHO05D002321 6.3e-07 57.8 93 36.6
PGSC0003DMG400036874 Solanum tuberosum HOM05D000855 ORTHO05D002321 6.3e-07 57.8 78 42.3
PSO063G7420 Papaver somniferum HOM05D000855 ORTHO05D001716 8.2e-07 57.4 82 40.2
PSO832G0050 Papaver somniferum HOM05D000855 ORTHO05D001716 8.2e-07 57.4 82 40.2
Sopen09g002220 Solanum pennellii HOM05D000855 ORTHO05D002321 8.2e-07 57.4 78 42.3
Aqoxy3G02940 Aquilegia oxysepala HOM05D000855 ORTHO05D008469 1.1e-06 57.0 96 32.3
Aqoxy4G03191 Aquilegia oxysepala HOM05D000855 ORTHO05D002321 1.1e-06 57.0 81 38.3
Solyc09g007340.4 Solanum lycopersicum HOM05D000855 ORTHO05D002321 1.1e-06 57.0 86 39.5
SGA_v2.0_scaffold94G28666 Striga asiatica HOM05D000855 ORTHO05D002321 1.1e-06 57.0 91 34.1
AT5G02950 Arabidopsis thaliana HOM05D000855 ORTHO05D002321 1.4e-06 56.6 73 42.5
Oeu055047.1 Olea europaea HOM05D000855 ORTHO05D002321 1.4e-06 56.6 73 39.7
Dinv31338 Davidia involucrata HOM05D000855 ORTHO05D002321 1.8e-06 56.2 78 35.9
Carub.0006s0175 Capsella rubella HOM05D000855 ORTHO05D002321 2.4e-06 55.8 84 38.1
CsaV3_3G044140 Cucumis sativus L. HOM05D000855 ORTHO05D002321 2.4e-06 55.8 77 40.3
Potri.006G131800 Populus trichocarpa HOM05D000855 ORTHO05D002321 2.4e-06 55.8 93 34.4
TWI15G0675 Tripterygium wilfordii HOM05D000855 ORTHO05D002321 2.4e-06 55.8 73 38.4
Cfa001590 Carpinus fangiana HOM05D000855 ORTHO05D002321 3.1e-06 55.5 79 34.2
ClCG07G013520 Citrullus lanatus HOM05D000855 ORTHO05D002321 3.1e-06 55.5 77 40.3
Haze_16938 Corylus avellana HOM05D000855 ORTHO05D002321 3.1e-06 55.5 79 34.2
MELO3C013022.2 Cucumis melo HOM05D000855 ORTHO05D002321 3.1e-06 55.5 77 40.3
Psat6g070600 Pisum sativum HOM05D000855 ORTHO05D002321 3.1e-06 55.5 83 37.3
COL.COLO4_27083 Corchorus olitorius HOM05D000855 ORTHO05D002321 4.1e-06 55.1 84 41.7
CSS0010994 Camellia sinensis var. sinensis HOM05D000855 ORTHO05D002321 5.3e-06 54.7 78 35.9
Gohir.D04G055600 Gossypium hirsutum HOM05D000855 ORTHO05D001716 5.3e-06 54.7 105 35.2
Gorai.012G062400 Gossypium raimondii HOM05D000855 ORTHO05D001716 5.3e-06 54.7 105 35.2
Hund02451 Selenicereus undatus HOM05D000855 ORTHO05D001716 5.3e-06 54.7 93 33.3
Phvul.007G163600 Phaseolus vulgaris HOM05D000855 ORTHO05D002321 6.9e-06 54.3 77 39.0
Aqoxy1G01590 Aquilegia oxysepala HOM05D000855 ORTHO05D002321 9.1e-06 53.9 73 38.4
Lj5g0013876 Lotus japonicus HOM05D000855 ORTHO05D002321 9.1e-06 53.9 77 37.7
Prupe.2G219200 Prunus persica HOM05D000855 ORTHO05D002321 9.1e-06 53.9 73 39.7
Sed0017477 Sechium edule HOM05D000855 ORTHO05D002321 9.1e-06 53.9 91 35.2


User provided reference genes

Program Settings