Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb261700 Zea mays HOM05D005771 ORTHO05D007173 4.0e-210 734.6 390 100.0
Os08g0129500 Oryza sativa ssp. japonica HOM05D005771 ORTHO05D007173 2.1e-102 376.7 382 58.1
Zm00001eb173270 Zea mays HOM05D005771 ORTHO05D007173 1.7e-67 260.8 226 69.9
TAR629G1255 Trochodendron aralioides HOM05D005771 ORTHO05D007173 1.8e-61 240.7 351 40.5
Dinv25170 Davidia involucrata HOM05D005771 ORTHO05D007173 2.0e-55 220.7 346 39.6
arahy.Tifrunner.gnm1.ann1.2CCA8K Arachis hypogaea HOM05D005771 ORTHO05D007173 1.7e-54 217.6 340 38.2
arahy.Tifrunner.gnm1.ann1.X1SA4Y Arachis hypogaea HOM05D005771 ORTHO05D007173 1.7e-54 217.6 340 38.2
Cfa012362 Carpinus fangiana HOM05D005771 ORTHO05D007173 1.7e-54 217.6 357 37.5
Nn6g33714 Nelumbo nucifera HOM05D005771 ORTHO05D007173 2.8e-54 216.9 349 37.2
Cc08_g01580 Coffea canephora HOM05D005771 ORTHO05D007173 3.7e-54 216.5 358 37.7
Lj4g0020972 Lotus japonicus HOM05D005771 ORTHO05D007173 1.4e-53 214.5 382 35.9
Hma1.2p1_0414F.1_g147560 Hydrangea macrophylla HOM05D005771 ORTHO05D007173 2.4e-53 213.8 344 39.0
Gorai.009G296800 Gossypium raimondii HOM05D005771 ORTHO05D007173 3.1e-53 213.4 354 35.9
Gohir.A05G281200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 7.0e-53 212.2 353 35.4
Gohir.D05G283033 Gossypium hirsutum HOM05D005771 ORTHO05D007173 9.1e-53 211.8 360 34.7
PGR031G0896 Punica granatum HOM05D005771 ORTHO05D007173 1.2e-52 211.5 351 39.6
HPP92_007338 Vanilla planifolia HOM05D005771 ORTHO05D007173 1.6e-52 211.1 347 38.9
Phvul.003G227100 Phaseolus vulgaris HOM05D005771 ORTHO05D007173 2.7e-52 210.3 362 37.6
RcHm_v2.0_Chr7g0207891 Rosa chinensis HOM05D005771 ORTHO05D007173 2.7e-52 210.3 399 37.6
Prupe.5G050200 Prunus persica HOM05D005771 ORTHO05D007173 3.5e-52 209.9 355 38.0
Glyma.17G150800 Glycine max HOM05D005771 ORTHO05D007173 5.9e-52 209.1 353 36.8
CiPaw.11G085900 Carya illinoinensis HOM05D005771 ORTHO05D007173 3.8e-51 206.5 354 37.9
MD06G1043400 Malus domestica HOM05D005771 ORTHO05D007173 5.0e-51 206.1 364 37.4
Lalb_Chr05g0220751 Lupinus albus HOM05D005771 ORTHO05D007173 1.9e-50 204.1 356 37.6
Atru.chr9.1139 Acer truncatum HOM05D005771 ORTHO05D007173 4.2e-50 203.0 354 37.3
FvH4_5g20870 Fragaria vesca HOM05D005771 ORTHO05D007173 4.2e-50 203.0 386 36.8
Medtr4g099070 Medicago truncatula HOM05D005771 ORTHO05D007173 1.6e-49 201.1 340 37.9
Potri.001G148500 Populus trichocarpa HOM05D005771 ORTHO05D007173 2.1e-49 200.7 358 36.9
Glyma.05G068200 Glycine max HOM05D005771 ORTHO05D007173 2.7e-49 200.3 358 36.0
Duzib106G1532 Durio zibethinus HOM05D005771 ORTHO05D007173 3.6e-49 199.9 367 34.3
CANSAT21G2176 Cannabis sativa HOM05D005771 ORTHO05D007173 4.7e-49 199.5 351 37.3
Lalb_Chr16g0386311 Lupinus albus HOM05D005771 ORTHO05D007173 6.1e-49 199.1 376 35.6
Sopen08g026040 Solanum pennellii HOM05D005771 ORTHO05D007173 1.0e-48 198.4 351 36.2
MD16G1267400 Malus domestica HOM05D005771 ORTHO05D007173 1.4e-48 198.0 394 34.5
Solyc08g077450.4 Solanum lycopersicum HOM05D005771 ORTHO05D007173 1.4e-48 198.0 351 36.5
FAN08G3334 Fragaria x ananassa HOM05D005771 ORTHO05D007173 1.8e-48 197.6 375 37.1
Aqoxy3G02583 Aquilegia oxysepala HOM05D005771 ORTHO05D007173 3.0e-48 196.8 359 35.7
QL12p007731 Quercus lobata HOM05D005771 ORTHO05D007173 5.2e-48 196.1 359 35.4
Gorai.011G213100 Gossypium raimondii HOM05D005771 ORTHO05D007173 8.8e-48 195.3 354 34.7
Oeu006260.1 Olea europaea HOM05D005771 ORTHO05D007173 8.8e-48 195.3 275 41.8
Potri.003G085901 Populus trichocarpa HOM05D005771 ORTHO05D007173 8.8e-48 195.3 354 36.7
Ca_22032_v3 Cicer arietinum L. HOM05D005771 ORTHO05D007173 1.2e-47 194.9 347 36.3
Eucgr.D02148 Eucalyptus grandis HOM05D005771 ORTHO05D007173 1.5e-47 194.5 368 36.4
Gohir.D10G190000 Gossypium hirsutum HOM05D005771 ORTHO05D007173 1.5e-47 194.5 359 33.1
Nitab4.5_0001444g0090 Nicotiana tabacum HOM05D005771 ORTHO05D007173 1.5e-47 194.5 395 37.2
FAN18G3681 Fragaria x ananassa HOM05D005771 ORTHO05D007173 2.0e-47 194.1 396 35.9
Thecc.10G165100 Theobroma cacao HOM05D005771 ORTHO05D007173 2.0e-47 194.1 356 33.7
Ciclev10020716m.g Citrus clementina HOM05D005771 ORTHO05D007173 2.6e-47 193.7 353 35.7
Manes.15G171600 Manihot esculenta HOM05D005771 ORTHO05D007173 3.4e-47 193.4 358 36.3
Nitab4.5_0001708g0070 Nicotiana tabacum HOM05D005771 ORTHO05D007173 7.5e-47 192.2 391 35.3
MSTRG.1962 Avicennia marina HOM05D005771 ORTHO05D007173 9.8e-47 191.8 344 36.9
FAN04G1778 Fragaria x ananassa HOM05D005771 ORTHO05D007173 9.8e-47 191.8 396 35.9
Migut.E00807 Erythranthe guttata HOM05D005771 ORTHO05D007173 1.3e-46 191.4 343 37.9
CiPaw.12G058800 Carya illinoinensis HOM05D005771 ORTHO05D007173 2.8e-46 190.3 350 35.1
Gohir.A10G183200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 2.8e-46 190.3 367 33.5
ClCG10G001970 Citrullus lanatus HOM05D005771 ORTHO05D007173 8.3e-46 188.7 353 35.1
Haze_08321 Corylus avellana HOM05D005771 ORTHO05D007173 1.4e-45 188.0 415 32.0
Sed0018056 Sechium edule HOM05D005771 ORTHO05D007173 1.4e-45 188.0 350 34.3
EL10Ac5g12212 Beta vulgaris HOM05D005771 ORTHO05D007173 2.4e-45 187.2 359 35.7
Lj2g0023107 Lotus japonicus HOM05D005771 ORTHO05D007173 2.4e-45 187.2 349 36.4
ATR0829G207 Amborella trichopoda HOM05D005771 ORTHO05D007173 5.4e-45 186.0 349 36.7
DCAR_000726 Daucus carota HOM05D005771 ORTHO05D007173 5.4e-45 186.0 296 37.5
Hund11296 Selenicereus undatus HOM05D005771 ORTHO05D007173 5.4e-45 186.0 360 34.4
Sc01g0007800 Simmondsia chinensis HOM05D005771 ORTHO05D007173 9.2e-45 185.3 390 34.9
SGA_v2.0_scaffold20G09242 Striga asiatica HOM05D005771 ORTHO05D007173 9.2e-45 185.3 286 41.3
TWI60G1113 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 9.2e-45 185.3 356 35.1
CDE02G0742 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 2.0e-44 184.1 344 34.9
COL.COLO4_05118 Corchorus olitorius HOM05D005771 ORTHO05D007173 2.0e-44 184.1 347 33.4
Migut.E00856 Erythranthe guttata HOM05D005771 ORTHO05D007173 2.0e-44 184.1 343 37.3
CSS0003087 Camellia sinensis var. sinensis HOM05D005771 ORTHO05D007173 2.7e-44 183.7 343 35.3
TPR.G11182 Trifolium pratense HOM05D005771 ORTHO05D007173 7.7e-44 182.2 380 32.9
Actinidia31481 Actinidia chinensis HOM05D005771 ORTHO05D007173 1.0e-43 181.8 345 33.6
CARHR032110 Cardamine hirsuta HOM05D005771 ORTHO05D007173 2.3e-43 180.6 286 39.2
TWI81G0410 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 8.6e-43 178.7 346 35.3
AL1G47010 Arabidopsis lyrata HOM05D005771 ORTHO05D007173 1.1e-42 178.3 309 36.6
HanXRQChr12g0368601 Helianthus annuus HOM05D005771 ORTHO05D007173 1.9e-42 177.6 341 34.9
AT1G32730 Arabidopsis thaliana HOM05D005771 ORTHO05D007173 3.3e-42 176.8 292 37.0
Actinidia10872 Actinidia chinensis HOM05D005771 ORTHO05D007173 9.5e-42 175.3 320 36.6
DCAR_000728 Daucus carota HOM05D005771 ORTHO05D007173 2.8e-41 173.7 296 36.8
Aa31LG2G13250 Aethionema arabicum HOM05D005771 ORTHO05D007173 3.6e-41 173.3 347 34.9
CsaV3_3G002100 Cucumis sativus L. HOM05D005771 ORTHO05D007173 3.6e-41 173.3 356 34.0
C05p32200 Brassica napus HOM05D005771 ORTHO05D007173 6.1e-41 172.6 354 34.2
BolC5t31952H Brassica oleracea HOM05D005771 ORTHO05D007173 6.1e-41 172.6 354 34.2
Lsat_1_v5_gn_6_67960 Lactuca sativa HOM05D005771 ORTHO05D007173 6.1e-41 172.6 279 40.1
THA.LOC104807943 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 2.3e-40 170.6 353 34.0
PSO782G3090 Papaver somniferum HOM05D005771 ORTHO05D007173 3.0e-40 170.2 336 36.0
CDE11G1022 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 5.2e-40 169.5 297 36.7
Thhalv10008194m.g Eutrema salsugineum HOM05D005771 ORTHO05D007173 6.8e-40 169.1 292 36.3
ECA233G5206 Erigeron canadensis HOM05D005771 ORTHO05D007173 2.6e-39 167.2 340 33.5
MELO3C013882.2 Cucumis melo HOM05D005771 ORTHO05D007173 3.4e-39 166.8 390 31.5
PSO063G1478 Papaver somniferum HOM05D005771 ORTHO05D007173 4.4e-39 166.4 382 33.2
THA.LOC104812740 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 3.7e-38 163.3 343 32.9
GSVIVG01013265001 Vitis vinifera HOM05D005771 ORTHO05D007173 3.7e-38 163.3 158 51.9
Carub.0001s3106 Capsella rubella HOM05D005771 ORTHO05D007173 4.9e-38 162.9 292 36.0
BcaC05g27301 Brassica carinata HOM05D005771 ORTHO05D007173 2.3e-35 154.1 366 31.7
Sp1g28240 Schrenkiella parvula HOM05D005771 ORTHO05D007173 6.2e-33 146.0 293 32.8
VMungo0251G2395 Vigna mungo HOM05D005771 ORTHO05D007173 4.9e-30 136.3 302 32.5
BcaC05g27831 Brassica carinata HOM05D005771 ORTHO05D007173 2.4e-29 134.0 309 33.0
C05p38290 Brassica napus HOM05D005771 ORTHO05D007173 2.4e-29 134.0 309 33.0
BolC5t32561H Brassica oleracea HOM05D005771 ORTHO05D007173 2.4e-29 134.0 309 33.0
Peaxi162Scf00084g00314 Petunia axillaris HOM05D005771 ORTHO05D007173 4.1e-29 133.3 342 31.0
A05p24640 Brassica napus HOM05D005771 ORTHO05D007173 3.5e-28 130.2 345 30.7
BraA05t21350Z Brassica rapa HOM05D005771 ORTHO05D007173 3.5e-28 130.2 345 30.7
unitig_21.g20376 Utricularia gibba HOM05D005771 ORTHO05D007173 4.6e-28 129.8 388 32.7
Sabra03G0055800 Salix brachista HOM05D005771 ORTHO05D007173 1.0e-27 128.6 395 29.9
Rhsim07G0120600 Rhododendron simsii HOM05D005771 ORTHO05D007173 9.5e-26 122.1 465 27.5
Cpa.g.sc2.371 Carica papaya HOM05D005771 ORTHO05D007173 1.2e-25 121.7 310 30.6
Psat4g077240 Pisum sativum HOM05D005771 ORTHO05D007173 1.6e-25 121.3 269 30.5
FAN13G3323 Fragaria x ananassa HOM05D005771 ORTHO05D007173 4.0e-24 116.7 380 31.3
AUR62018795 Chenopodium quinoa HOM05D005771 ORTHO05D007173 8.9e-24 115.5 311 31.8
vmacro14112 Vaccinium macrocarpon HOM05D005771 ORTHO05D007173 1.2e-23 115.2 276 31.5
AUR62007206 Chenopodium quinoa HOM05D005771 ORTHO05D007173 2.9e-22 110.5 310 29.7
Oeu039354.1 Olea europaea HOM05D005771 ORTHO05D007173 7.8e-20 102.4 263 28.1
Sabra01G0116900 Salix brachista HOM05D005771 ORTHO05D007173 3.3e-18 97.1 276 30.1
Ah.07g199650 Amaranthus hybridus HOM05D005771 ORTHO05D007173 8.1e-17 92.4 382 24.9
SEGI_22059 Sequoiadendron giganteum HOM05D005771 ORTHO05D000001 2.3e-16 90.9 316 30.1
Mapoly0082s0082 Marchantia polymorpha HOM05D005771 ORTHO05D007173 1.7e-14 84.7 414 25.8
SEGI_34267 Sequoiadendron giganteum HOM05D005771 ORTHO05D007173 2.2e-14 84.3 69 60.9
Pp3c2_10410 Physcomitrium patens HOM05D005771 ORTHO05D007173 3.2e-13 80.5 432 25.2
Psat4g077280 Pisum sativum HOM05D005771 ORTHO05D007173 4.1e-13 80.1 73 54.8
Sabra01G0118400 Salix brachista HOM05D005771 ORTHO05D007173 5.4e-13 79.7 175 34.3
arahy.Tifrunner.gnm1.ann1.ARXY04 Arachis hypogaea HOM05D005771 ORTHO05D007173 1.1e-10 72.0 90 43.3
TPR.G12459 Trifolium pratense HOM05D005771 ORTHO05D007173 1.9e-10 71.2 150 32.7
AagrBONN_evm.TU.Sc2ySwM_117.836 Anthoceros agrestis HOM05D005771 ORTHO05D007173 1.1e-08 65.5 350 23.7
SMO347G0210 Selaginella moellendorffii HOM05D005771 ORTHO05D007173 1.3e-06 58.5 254 26.0
TAR636G0006 Trochodendron aralioides HOM05D005771 ORTHO05D007173 2.9e-06 57.4 43 60.5


User provided reference genes

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