Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb255740 Zea mays HOM05D000059 ORTHO05D009759 5.6e-98 360.9 178 100.0
Zm00001eb339780 Zea mays HOM05D000059 ORTHO05D009759 6.8e-88 327.4 181 90.1
Zm00001eb306730 Zea mays HOM05D000059 ORTHO05D009759 4.5e-55 218.4 142 75.4
Os05g0489900 Oryza sativa ssp. japonica HOM05D000059 ORTHO05D009759 7.9e-52 207.6 167 64.1
CiPaw.13G047900 Carya illinoinensis HOM05D000059 ORTHO05D009759 1.4e-48 196.8 169 58.0
MBI19_g28108_MAGBIO Magnolia biondii HOM05D000059 ORTHO05D009759 1.4e-48 196.8 167 60.5
Lalb_Chr19g0132601 Lupinus albus HOM05D000059 ORTHO05D009759 1.5e-47 193.4 169 56.8
PGR142G1020 Punica granatum HOM05D000059 ORTHO05D009759 5.8e-47 191.4 169 58.6
Eucgr.G02633 Eucalyptus grandis HOM05D000059 ORTHO05D009759 7.6e-47 191.0 169 56.8
HPP92_017887 Vanilla planifolia HOM05D000059 ORTHO05D009759 1.3e-46 190.3 169 57.4
Phvul.011G186900 Phaseolus vulgaris HOM05D000059 ORTHO05D009759 1.7e-46 189.9 169 56.2
Atru.chr12.1136 Acer truncatum HOM05D000059 ORTHO05D009759 2.2e-46 189.5 162 58.0
DCAR_011576 Daucus carota HOM05D000059 ORTHO05D009759 2.2e-46 189.5 167 58.7
arahy.Tifrunner.gnm1.ann1.DT2ZPD Arachis hypogaea HOM05D000059 ORTHO05D009759 2.9e-46 189.1 169 56.2
arahy.Tifrunner.gnm1.ann1.R5AJY0 Arachis hypogaea HOM05D000059 ORTHO05D009759 2.9e-46 189.1 169 56.2
Manes.10G063500 Manihot esculenta HOM05D000059 ORTHO05D009759 2.9e-46 189.1 164 57.3
QL04p050706 Quercus lobata HOM05D000059 ORTHO05D009759 2.9e-46 189.1 169 53.8
DCAR_023134 Daucus carota HOM05D000059 ORTHO05D009759 6.4e-46 188.0 167 58.1
TAR633G1052 Trochodendron aralioides HOM05D000059 ORTHO05D009759 6.4e-46 188.0 167 58.1
Sabra10G0192800 Salix brachista HOM05D000059 ORTHO05D009759 1.1e-45 187.2 164 56.1
Ciclev10000859m.g Citrus clementina HOM05D000059 ORTHO05D009759 1.4e-45 186.8 162 58.0
FvH4_5g27182 Fragaria vesca HOM05D000059 ORTHO05D009759 1.4e-45 186.8 169 55.6
FAN18G2260 Fragaria x ananassa HOM05D000059 ORTHO05D009759 1.4e-45 186.8 169 55.6
GSVIVG01027353001 Vitis vinifera HOM05D000059 ORTHO05D009759 2.4e-45 186.0 167 57.5
Glyma.08G227200 Glycine max HOM05D000059 ORTHO05D009759 3.2e-45 185.7 169 55.6
Cfa010436 Carpinus fangiana HOM05D000059 ORTHO05D009759 4.2e-45 185.3 141 62.4
Potri.010G247400 Populus trichocarpa HOM05D000059 ORTHO05D009759 5.5e-45 184.9 164 55.5
VMungo1127G1077 Vigna mungo HOM05D000059 ORTHO05D009759 5.5e-45 184.9 169 55.0
COL.COLO4_07153 Corchorus olitorius HOM05D000059 ORTHO05D009759 1.2e-44 183.7 164 56.7
vmacro13792 Vaccinium macrocarpon HOM05D000059 ORTHO05D009759 1.2e-44 183.7 169 56.2
CANSAT11G0801 Cannabis sativa HOM05D000059 ORTHO05D009759 1.6e-44 183.3 169 55.6
Dinv02047 Davidia involucrata HOM05D000059 ORTHO05D009759 1.6e-44 183.3 162 57.4
Lj3g0014051 Lotus japonicus HOM05D000059 ORTHO05D009759 1.6e-44 183.3 169 55.0
Rhsim07G0072600 Rhododendron simsii HOM05D000059 ORTHO05D009759 1.6e-44 183.3 169 55.6
Oeu013046.1 Olea europaea HOM05D000059 ORTHO05D009759 2.1e-44 183.0 167 56.3
Actinidia12137 Actinidia chinensis HOM05D000059 ORTHO05D009759 2.7e-44 182.6 167 56.9
Duzib114G0502 Durio zibethinus HOM05D000059 ORTHO05D009759 2.7e-44 182.6 162 56.8
Gorai.N006600 Gossypium raimondii HOM05D000059 ORTHO05D009759 2.7e-44 182.6 164 56.7
Sed0015296 Sechium edule HOM05D000059 ORTHO05D009759 2.7e-44 182.6 164 55.5
Aqoxy1G04298 Aquilegia oxysepala HOM05D000059 ORTHO05D009759 3.5e-44 182.2 167 56.3
CsaV3_6G004640 Cucumis sativus L. HOM05D000059 ORTHO05D009759 3.5e-44 182.2 164 55.5
TWI38G0951 Tripterygium wilfordii HOM05D000059 ORTHO05D009759 3.5e-44 182.2 139 60.4
Cpa.g.sc54.31 Carica papaya HOM05D000059 ORTHO05D009759 4.6e-44 181.8 169 55.0
MD07G1053900 Malus domestica HOM05D000059 ORTHO05D009759 4.6e-44 181.8 164 54.9
RcHm_v2.0_Chr7g0218291 Rosa chinensis HOM05D000059 ORTHO05D009759 4.6e-44 181.8 169 54.4
Glyma.15G222300 Glycine max HOM05D000059 ORTHO05D009759 7.9e-44 181.0 169 54.4
Thecc.10G130400 Theobroma cacao HOM05D000059 ORTHO05D009759 1.0e-43 180.6 162 56.2
Cc08_g09570 Coffea canephora HOM05D000059 ORTHO05D009759 1.3e-43 180.3 167 55.7
Ca_24119_v3 Cicer arietinum L. HOM05D000059 ORTHO05D009759 1.8e-43 179.9 169 55.0
Peaxi162Scf00647g00529 Petunia axillaris HOM05D000059 ORTHO05D009759 5.1e-43 178.3 167 56.3
Lsat_1_v5_gn_8_117641 Lactuca sativa HOM05D000059 ORTHO05D009759 1.9e-42 176.4 162 56.2
TPR.G25025 Trifolium pratense HOM05D000059 ORTHO05D009759 1.9e-42 176.4 169 54.4
Medtr8g043970 Medicago truncatula HOM05D000059 ORTHO05D009759 4.3e-42 175.3 169 53.8
FAN08G3269 Fragaria x ananassa HOM05D000059 ORTHO05D009759 5.6e-42 174.9 188 49.5
Psat4g141880 Pisum sativum HOM05D000059 ORTHO05D009759 5.6e-42 174.9 141 58.9
HanXRQChr09g0258271 Helianthus annuus HOM05D000059 ORTHO05D009759 9.6e-42 174.1 167 53.9
PSO384G3320 Papaver somniferum HOM05D000059 ORTHO05D009759 9.6e-42 174.1 167 53.3
ATR0307G069 Amborella trichopoda HOM05D000059 ORTHO05D009759 2.8e-41 172.6 141 58.9
ECA232G4524 Erigeron canadensis HOM05D002501 ORTHO05D009759 8.2e-41 171.0 167 52.7
PSO339G3396 Papaver somniferum HOM05D000059 ORTHO05D009759 1.1e-40 170.6 167 52.1
CAN.G134.45 Capsicum annuum HOM05D000059 ORTHO05D009759 2.4e-40 169.5 164 55.5
Migut.N01872 Erythranthe guttata HOM05D000059 ORTHO05D009759 3.1e-40 169.1 167 52.7
Hma1.2p1_0233F.1_g098010 Hydrangea macrophylla HOM05D000059 ORTHO05D009759 2.0e-39 166.4 187 50.3
PGSC0003DMG400027527 Solanum tuberosum HOM05D000059 ORTHO05D009759 2.0e-39 166.4 164 54.9
SEGI_19769 Sequoiadendron giganteum HOM05D000059 ORTHO05D009759 5.8e-39 164.9 164 53.0
SMO353G0224 Selaginella moellendorffii HOM05D000059 ORTHO05D009759 1.7e-38 163.3 141 57.4
SalBow6G6738 Salvia bowleyana HOM05D000059 ORTHO05D009759 2.2e-38 162.9 167 52.1
Nn7g37296 Nelumbo nucifera HOM05D000059 ORTHO05D009759 4.9e-38 161.8 167 49.7
Haze_03390 Corylus avellana HOM05D000059 ORTHO05D009759 5.5e-37 158.3 228 41.7
Solyc01g096820.4 Solanum lycopersicum HOM05D000059 ORTHO05D009759 9.3e-37 157.5 157 54.8
Haze_03394 Corylus avellana HOM05D000059 ORTHO05D009759 2.7e-36 156.0 228 41.7
Sopen01g040520 Solanum pennellii HOM05D000059 ORTHO05D009759 1.3e-35 153.7 157 53.5
CSS0013163 Camellia sinensis var. sinensis HOM05D000059 ORTHO05D009759 5.1e-35 151.8 113 62.8
CSS0038335 Camellia sinensis var. sinensis HOM05D000059 ORTHO05D009759 5.1e-35 151.8 113 62.8
Gohir.D06G178600 Gossypium hirsutum HOM05D000059 ORTHO05D009759 2.5e-34 149.4 112 62.5
ClCG08G008620 Citrullus lanatus HOM05D000059 ORTHO05D009759 1.2e-31 140.6 164 47.0
Nitab4.5_0002687g0090 Nicotiana tabacum HOM05D000059 ORTHO05D009759 5.9e-31 138.3 138 55.1
Nitab4.5_0006602g0020 Nicotiana tabacum HOM05D000059 ORTHO05D009759 5.0e-30 135.2 132 56.1
Pp3c21_15330 Physcomitrium patens HOM05D000059 ORTHO05D009759 1.6e-28 130.2 139 46.8
MELO3C019932.2 Cucumis melo HOM05D000059 ORTHO05D009759 4.3e-26 122.1 90 61.1
Potri.008G011541 Populus trichocarpa HOM05D000059 ORTHO05D009759 1.3e-25 120.6 141 48.2
Gohir.A06G170800 Gossypium hirsutum HOM05D000059 ORTHO05D009759 1.1e-24 117.5 94 58.5
HPP92_017883 Vanilla planifolia HOM05D000059 ORTHO05D009759 1.4e-19 100.5 115 46.1
AagrBONN_evm.TU.Sc2ySwM_344.2077 Anthoceros agrestis HOM05D000059 ORTHO05D009759 2.4e-16 89.7 94 50.0
CBR_g24449 Chara braunii HOM05D000059 ORTHO05D009759 5.9e-15 85.1 88 45.5
Cpa.g.sc54.33 Carica papaya HOM05D000059 ORTHO05D034084 1.7e-09 67.0 77 49.4
MELO3C030256.2 Cucumis melo HOM05D000059 ORTHO05D034084 5.9e-07 58.5 85 42.4
ECA236G3707 Erigeron canadensis HOM05D000491 ORTHO05D000359 2.9e-06 56.2 96 38.5


User provided reference genes

Program Settings