Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb255680 Zea mays HOM05D006261 ORTHO05D007979 6.3e-261 903.7 488 100.0
Os02g0761200 Oryza sativa ssp. japonica HOM05D006261 ORTHO05D007979 1.2e-179 633.6 492 72.4
CANSAT25G2015 Cannabis sativa HOM05D006261 ORTHO05D007979 4.4e-145 518.8 485 57.1
MBI02_g21208_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 1.7e-144 516.9 508 56.5
TAR381G0774 Trochodendron aralioides HOM05D006261 ORTHO05D007979 3.7e-144 515.8 492 56.3
Manes.15G143000 Manihot esculenta HOM05D006261 ORTHO05D007979 4.1e-143 512.3 492 57.5
Nn5g30173 Nelumbo nucifera HOM05D006261 ORTHO05D007979 2.0e-142 510.0 495 56.2
TWI31G0850 Tripterygium wilfordii HOM05D006261 ORTHO05D007979 1.3e-141 507.3 491 56.4
Potri.004G144100 Populus trichocarpa HOM05D006261 ORTHO05D007979 2.5e-140 503.1 485 55.7
QL11p038259 Quercus lobata HOM05D006261 ORTHO05D007979 4.2e-140 502.3 486 56.6
Gorai.002G007100 Gossypium raimondii HOM05D006261 ORTHO05D007979 2.6e-137 493.0 489 54.2
PSO541G6069 Papaver somniferum HOM05D006261 ORTHO05D007979 4.4e-137 492.3 491 54.4
Ciclev10028211m.g Citrus clementina HOM05D006261 ORTHO05D007979 2.8e-136 489.6 485 54.0
Cfa005432 Carpinus fangiana HOM05D006261 ORTHO05D007979 4.8e-136 488.8 488 56.4
THA.LOC104807349 Tarenaya hassleriana HOM05D006261 ORTHO05D007979 4.8e-136 488.8 488 55.3
Sabra04G0095700 Salix brachista HOM05D006261 ORTHO05D007979 1.1e-135 487.6 494 53.8
Thecc.02G096300 Theobroma cacao HOM05D006261 ORTHO05D007979 1.4e-135 487.3 488 54.7
GSVIVG01031798001 Vitis vinifera HOM05D006261 ORTHO05D007979 1.8e-135 486.9 487 55.6
CsaV3_7G008780 Cucumis sativus L. HOM05D006261 ORTHO05D007979 3.1e-135 486.1 484 55.4
Lalb_Chr10g0095461 Lupinus albus HOM05D006261 ORTHO05D007979 4.1e-135 485.7 490 54.1
Potri.009G106100 Populus trichocarpa HOM05D006261 ORTHO05D007979 4.1e-135 485.7 487 54.0
FAN15G2665 Fragaria x ananassa HOM05D006261 ORTHO05D007979 3.5e-134 482.6 483 54.9
Eucgr.I01173 Eucalyptus grandis HOM05D006261 ORTHO05D007979 4.5e-134 482.3 486 54.7
Aqoxy6G01433 Aquilegia oxysepala HOM05D006261 ORTHO05D007979 5.9e-134 481.9 486 53.7
Haze_01887 Corylus avellana HOM05D006261 ORTHO05D007979 1.3e-133 480.7 488 55.1
FAN20G2731 Fragaria x ananassa HOM05D006261 ORTHO05D007979 2.2e-133 479.9 483 54.7
SGA_v2.0_scaffold58G20611 Striga asiatica HOM05D006261 ORTHO05D007979 2.2e-133 479.9 487 54.0
Prupe.8G116700 Prunus persica HOM05D006261 ORTHO05D007979 2.9e-133 479.6 485 54.0
COL.COLO4_11716 Corchorus olitorius HOM05D006261 ORTHO05D007979 6.5e-133 478.4 487 53.6
FAN27G0123 Fragaria x ananassa HOM05D006261 ORTHO05D007979 8.5e-133 478.0 483 54.7
Rhsim05G0080700 Rhododendron simsii HOM05D006261 ORTHO05D007979 8.5e-133 478.0 507 52.3
Lj2g0017302 Lotus japonicus HOM05D006261 ORTHO05D007979 1.5e-132 477.2 483 53.0
Aa31LG2G16340 Aethionema arabicum HOM05D006261 ORTHO05D007979 2.5e-132 476.5 487 53.6
Hund06186 Selenicereus undatus HOM05D006261 ORTHO05D007979 3.2e-132 476.1 485 53.0
Hma1.2p1_3161F.1_g333480 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 7.2e-132 474.9 520 51.7
Atru.chr5.2784_Atru.chr5.2785 Acer truncatum HOM05D006261 ORTHO05D007979 1.6e-131 473.8 486 53.5
Atru.chr5.2799_Atru.chr5.2800 Acer truncatum HOM05D006261 ORTHO05D007979 1.6e-131 473.8 486 53.5
vmacro19482 Vaccinium macrocarpon HOM05D006261 ORTHO05D007979 2.7e-131 473.0 510 51.8
Cc02_g18510 Coffea canephora HOM05D006261 ORTHO05D007979 3.6e-131 472.6 489 53.8
Psat6g096640 Pisum sativum HOM05D006261 ORTHO05D007979 4.7e-131 472.2 485 53.8
RcHm_v2.0_Chr6g0259011 Rosa chinensis HOM05D006261 ORTHO05D007979 4.7e-131 472.2 482 53.1
MD10G1089700 Malus domestica HOM05D006261 ORTHO05D007979 6.1e-131 471.9 485 54.2
Hma1.2p1_0584F.1_g183110 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 1.0e-130 471.1 519 51.6
TPR.G11138 Trifolium pratense HOM05D006261 ORTHO05D007979 1.0e-130 471.1 485 52.2
ATR0097G005 Amborella trichopoda HOM05D006261 ORTHO05D007979 1.4e-130 470.7 509 52.5
arahy.Tifrunner.gnm1.ann1.WU5QTE Arachis hypogaea HOM05D006261 ORTHO05D007979 1.8e-130 470.3 499 53.3
arahy.Tifrunner.gnm1.ann1.97F800 Arachis hypogaea HOM05D006261 ORTHO05D007979 3.0e-130 469.5 498 53.6
CiPaw.05G054700 Carya illinoinensis HOM05D006261 ORTHO05D007979 3.0e-130 469.5 519 51.4
SalBow6G7179 Salvia bowleyana HOM05D006261 ORTHO05D007979 3.0e-130 469.5 484 52.7
Gohir.A01G006000 Gossypium hirsutum HOM05D006261 ORTHO05D007979 4.0e-130 469.2 490 52.7
C01p04840 Brassica napus HOM05D006261 ORTHO05D007979 6.8e-130 468.4 487 52.8
PGSC0003DMG400022938 Solanum tuberosum HOM05D006261 ORTHO05D007979 6.8e-130 468.4 486 52.5
Glyma.07G178400 Glycine max HOM05D006261 ORTHO05D007979 2.0e-129 466.8 488 52.9
BolC1t00468H Brassica oleracea HOM05D006261 ORTHO05D007979 2.6e-129 466.5 487 52.2
A01p04450 Brassica napus HOM05D006261 ORTHO05D007979 4.4e-129 465.7 486 52.7
Migut.B00311 Erythranthe guttata HOM05D006261 ORTHO05D007979 4.4e-129 465.7 487 51.3
Solyc11g044870.2 Solanum lycopersicum HOM05D006261 ORTHO05D007979 7.5e-129 464.9 486 52.5
Thhalv10025131m.g Eutrema salsugineum HOM05D006261 ORTHO05D007979 9.8e-129 464.5 490 52.4
BraA01t00432Z Brassica rapa HOM05D006261 ORTHO05D007979 2.8e-128 463.0 486 52.3
Ca_12470_v3 Cicer arietinum L. HOM05D006261 ORTHO05D007979 6.3e-128 461.8 485 50.9
AL7G17470 Arabidopsis lyrata HOM05D006261 ORTHO05D007979 1.4e-127 460.7 488 51.8
Lsat_1_v5_gn_7_87821 Lactuca sativa HOM05D006261 ORTHO05D007979 1.4e-127 460.7 486 52.7
Sp7g31680 Schrenkiella parvula HOM05D006261 ORTHO05D007979 1.8e-127 460.3 490 52.0
HanXRQChr16g0508741 Helianthus annuus HOM05D006261 ORTHO05D007979 3.1e-127 459.5 486 53.5
Medtr1g034000 Medicago truncatula HOM05D006261 ORTHO05D007979 4.1e-127 459.1 487 51.3
Sopen11g020360 Solanum pennellii HOM05D006261 ORTHO05D007979 1.6e-126 457.2 485 51.5
CSS0049642 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 2.7e-126 456.4 491 52.3
Carub.0007s0647 Capsella rubella HOM05D006261 ORTHO05D007979 3.5e-126 456.1 488 52.0
MELO3C018434.2 Cucumis melo HOM05D006261 ORTHO05D007979 4.5e-126 455.7 484 52.9
AT4G33945 Arabidopsis thaliana HOM05D006261 ORTHO05D007979 5.9e-126 455.3 487 51.1
Actinidia17850 Actinidia chinensis HOM05D006261 ORTHO05D007979 3.8e-125 452.6 417 56.4
VMungo1215G1075 Vigna mungo HOM05D006261 ORTHO05D007979 3.8e-125 452.6 487 52.0
Phvul.003G012500 Phaseolus vulgaris HOM05D006261 ORTHO05D007979 8.6e-125 451.4 490 52.4
HPP92_004260 Vanilla planifolia HOM05D006261 ORTHO05D007979 1.5e-124 450.7 493 50.7
CSS0020679 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 5.6e-124 448.7 486 51.9
HPP92_004238 Vanilla planifolia HOM05D006261 ORTHO05D007979 5.6e-124 448.7 493 50.1
EL10Ac9g21824 Beta vulgaris HOM05D006261 ORTHO05D007979 7.3e-124 448.4 497 49.1
Peaxi162Scf00684g00565 Petunia axillaris HOM05D006261 ORTHO05D007979 1.8e-122 443.7 407 56.3
unitig_21.g20756 Utricularia gibba HOM05D006261 ORTHO05D007979 2.3e-122 443.4 485 50.7
AUR62011430 Chenopodium quinoa HOM05D006261 ORTHO05D007979 1.2e-121 441.0 489 48.9
AUR62016631 Chenopodium quinoa HOM05D006261 ORTHO05D007979 1.0e-117 427.9 502 47.6
ClCG02G005750 Citrullus lanatus HOM05D006261 ORTHO05D007979 1.3e-117 427.6 484 50.8
Nitab4.5_0000736g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 2.5e-116 423.3 483 49.1
Sed0027300 Sechium edule HOM05D006261 ORTHO05D007979 1.2e-115 421.0 373 57.6
Gohir.D01G006100 Gossypium hirsutum HOM05D006261 ORTHO05D007979 4.7e-115 419.1 489 48.5
Sc08g0000100 Simmondsia chinensis HOM05D006261 ORTHO05D007979 8.0e-115 418.3 446 51.8
Oeu007256.2 Olea europaea HOM05D006261 ORTHO05D007979 1.4e-114 417.5 442 52.0
ECA236G1018 Erigeron canadensis HOM05D006261 ORTHO05D001911 5.2e-114 415.6 401 54.6
Lj9C360T7 Lonicera japonica HOM05D006261 ORTHO05D007979 9.8e-113 411.4 507 48.7
Ah.01g020100 Amaranthus hybridus HOM05D006261 ORTHO05D007979 6.4e-112 408.7 492 47.0
FAN24G3480 Fragaria x ananassa HOM05D006261 ORTHO05D007979 6.0e-110 402.1 451 51.9
SEGI_22642 Sequoiadendron giganteum HOM05D006261 ORTHO05D007979 1.3e-109 401.0 507 44.2
Cpa.g.sc62.43 Carica papaya HOM05D006261 ORTHO05D007979 5.0e-109 399.1 322 61.8
Duzib052G0221 Durio zibethinus HOM05D006261 ORTHO05D007979 7.3e-108 395.2 487 46.4
PGR142G4090 Punica granatum HOM05D006261 ORTHO05D007979 1.2e-102 377.9 317 60.3
MSTRG.16765 Avicennia marina HOM05D006261 ORTHO05D007979 5.2e-98 362.5 485 44.3
CDE10G1007 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 2.9e-96 356.7 509 43.2
FvH4_2g06790 Fragaria vesca HOM05D006261 ORTHO05D007979 3.2e-95 353.2 384 52.3
Nitab4.5_0002141g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 5.6e-92 342.4 314 55.7
Dinv23589 Davidia involucrata HOM05D006261 ORTHO05D007979 8.9e-90 335.1 351 53.8
SHI05382 Sapria himalayana HOM05D006261 ORTHO05D007979 4.6e-78 296.2 389 43.7
CAN.G406.2 Capsicum annuum HOM05D006261 ORTHO05D007979 6.7e-77 292.4 351 47.9
DCAR_000243 Daucus carota HOM05D006261 ORTHO05D007979 1.1e-76 291.6 352 49.4
Mapoly0088s0010 Marchantia polymorpha HOM05D006261 ORTHO05D007979 1.5e-76 291.2 491 37.3
BcaB03g11867 Brassica carinata HOM05D006261 ORTHO05D007979 9.6e-76 288.5 267 57.7
CDE10G0955 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 6.9e-74 282.3 370 43.8
SMO116G0201 Selaginella moellendorffii HOM05D006261 ORTHO05D007979 1.1e-68 265.0 447 37.1
CARHR242070 Cardamine hirsuta HOM05D006261 ORTHO05D007979 1.4e-66 258.1 220 57.7
Haze_01888 Corylus avellana HOM05D006261 ORTHO05D007979 2.2e-64 250.8 315 49.5
RcHm_v2.0_Chr6g0252951 Rosa chinensis HOM05D006261 ORTHO05D007979 6.5e-56 222.6 349 40.1
Pp3c15_12310 Physcomitrium patens HOM05D006261 ORTHO05D007979 3.6e-54 216.9 513 31.0
MBI02_g32602_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 5.7e-44 183.0 156 59.6
MCO13G090 Micromonas commoda HOM05D006261 ORTHO05D007979 3.2e-39 167.2 517 30.2
Glyma.20G009900 Glycine max HOM05D006261 ORTHO05D007979 6.7e-37 159.5 202 45.5
Cre07.g343850 Chlamydomonas reinhardtii HOM05D006261 ORTHO05D007979 2.7e-30 137.5 500 27.0
MBI15_g16863_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 2.2e-24 117.9 128 50.8
CAN.G406.3 Capsicum annuum HOM05D006261 ORTHO05D007979 1.8e-21 108.2 141 46.8
PRCOL_00000949 Prasinoderma coloniale HOM05D006261 ORTHO05D007979 2.3e-21 107.8 421 24.9
DCAR_022063 Daucus carota HOM05D006261 ORTHO05D007979 1.7e-19 101.7 84 58.3
BcaB01g01387 Brassica carinata HOM05D006261 ORTHO05D007979 2.7e-17 94.4 81 55.6
BcaB06g27277 Brassica carinata HOM05D006261 ORTHO05D007979 1.0e-16 92.4 82 57.3
BcaB01g01385 Brassica carinata HOM05D006261 ORTHO05D007979 1.3e-16 92.0 81 56.8
CBR_g53672 Chara braunii HOM05D000019 ORTHO05D000353 2.3e-16 91.3 226 28.3
SHI05383 Sapria himalayana HOM05D006261 ORTHO05D007979 3.6e-14 84.0 100 47.0
Dinv42128 Davidia involucrata HOM05D006261 ORTHO05D007979 1.0e-13 82.4 161 37.3
CAN.G93.11 Capsicum annuum HOM05D006261 ORTHO05D007979 3.4e-12 77.4 100 45.0


User provided reference genes

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