Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb246980 Zea mays HOM05D000063 ORTHO05D444115 1.2e-32 142.5 71 100.0
Zm00001eb082700 Zea mays HOM05D000063 ORTHO05D009580 8.9e-15 83.2 48 83.3
Os04g0432100 Oryza sativa ssp. japonica HOM05D000063 ORTHO05D009580 9.2e-12 73.2 47 72.3
Zm00001eb422620 Zea mays HOM05D000063 ORTHO05D009580 1.6e-11 72.4 47 74.5
Lj7C299T0 Lonicera japonica HOM05D000063 ORTHO05D009580 1.6e-08 62.4 79 45.6
MSTRG.25434 Avicennia marina HOM05D000063 ORTHO05D009580 4.0e-07 57.8 49 55.1
TWI34G1404 Tripterygium wilfordii HOM05D000063 ORTHO05D009580 6.8e-07 57.0 47 55.3
Dinv41686 Davidia involucrata HOM05D000063 ORTHO05D009580 1.2e-06 56.2 48 56.2
RcHm_v2.0_Chr6g0272211 Rosa chinensis HOM05D000063 ORTHO05D009580 1.2e-06 56.2 48 54.2
Nitab4.5_0000159g0150 Nicotiana tabacum HOM05D000063 ORTHO05D009580 1.5e-06 55.8 43 58.1
CSS0033772 Camellia sinensis var. sinensis HOM05D000063 ORTHO05D009580 2.0e-06 55.5 48 54.2
Nn5g27802 Nelumbo nucifera HOM05D000063 ORTHO05D009580 2.0e-06 55.5 48 54.2
PGR042G3033 Punica granatum HOM05D000063 ORTHO05D009580 2.0e-06 55.5 48 54.2
PGSC0003DMG400009233 Solanum tuberosum HOM05D000063 ORTHO05D009580 2.0e-06 55.5 49 49.0
AUR62023581 Chenopodium quinoa HOM05D001824 ORTHO05D003650 2.6e-06 55.1 44 54.5
Migut.N03341 Erythranthe guttata HOM05D000063 ORTHO05D009580 2.6e-06 55.1 48 54.2
MD10G1046300 Malus domestica HOM05D000063 ORTHO05D009580 2.6e-06 55.1 47 55.3
QL02p034121 Quercus lobata HOM05D000063 ORTHO05D009580 2.6e-06 55.1 48 54.2
SalBow6G2313 Salvia bowleyana HOM05D000063 ORTHO05D009580 2.6e-06 55.1 41 61.0
SalBow6G6584 Salvia bowleyana HOM05D000063 ORTHO05D009580 2.6e-06 55.1 41 61.0
Duzib116G0120 Durio zibethinus HOM05D000063 ORTHO05D009580 3.4e-06 54.7 48 54.2
Gohir.A05G274400 Gossypium hirsutum HOM05D000063 ORTHO05D009580 3.4e-06 54.7 47 55.3
Solyc11g017100.1 Solanum lycopersicum HOM05D000063 ORTHO05D009580 3.4e-06 54.7 43 55.8
Thecc.08G201700 Theobroma cacao HOM05D000063 ORTHO05D009580 3.4e-06 54.7 48 54.2
CAN.G61.20 Capsicum annuum HOM05D000063 ORTHO05D009580 4.4e-06 54.3 49 46.9
Cpa.g.sc66.59 Carica papaya HOM05D000063 ORTHO05D009580 4.4e-06 54.3 44 56.8
Gohir.D05G276600 Gossypium hirsutum HOM05D000063 ORTHO05D009580 4.4e-06 54.3 47 55.3
Gorai.009G289600 Gossypium raimondii HOM05D000063 ORTHO05D009580 4.4e-06 54.3 47 55.3
DCAR_023102 Daucus carota HOM05D000063 ORTHO05D009580 5.8e-06 53.9 48 56.2
MD05G1040300 Malus domestica HOM05D000063 ORTHO05D009580 5.8e-06 53.9 44 56.8
SalBow7G3756 Salvia bowleyana HOM05D000063 ORTHO05D009580 5.8e-06 53.9 41 61.0
HPP92_009264 Vanilla planifolia HOM05D000063 ORTHO05D009580 5.8e-06 53.9 41 61.0
Duzib177G0668 Durio zibethinus HOM05D000063 ORTHO05D009580 7.6e-06 53.5 48 52.1
Cc08_g06100 Coffea canephora HOM05D000063 ORTHO05D009580 9.9e-06 53.1 48 52.1
COL.COLO4_35564 Corchorus olitorius HOM05D000063 ORTHO05D009580 9.9e-06 53.1 48 52.1
Eucgr.F02630 Eucalyptus grandis HOM05D000063 ORTHO05D009580 9.9e-06 53.1 47 53.2
FAN27G2757 Fragaria x ananassa HOM05D000063 ORTHO05D009580 9.9e-06 53.1 48 52.1
MBI09_g02132_MAGBIO Magnolia biondii HOM05D000063 ORTHO05D009580 9.9e-06 53.1 48 52.1
Prupe.8G054000 Prunus persica HOM05D000063 ORTHO05D009580 9.9e-06 53.1 48 52.1
TAR628G0342 Trochodendron aralioides HOM05D000063 ORTHO05D009580 9.9e-06 53.1 48 52.1


User provided reference genes

Program Settings