Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb244230 Zea mays HOM05D006202 ORTHO05D008227 3.7e-227 791.2 394 100.0
Os12g0507000 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 1.6e-190 669.5 398 82.4
Os02g0258900 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 2.0e-185 652.5 395 81.5
Aqoxy1G00030 Aquilegia oxysepala HOM05D006202 ORTHO05D008227 6.4e-171 604.4 348 82.2
MBI04_g33961_MAGBIO Magnolia biondii HOM05D006202 ORTHO05D008227 2.1e-169 599.4 405 73.6
Sed0014986 Sechium edule HOM05D006202 ORTHO05D008227 2.1e-166 589.3 355 80.6
RcHm_v2.0_Chr1g0313251 Rosa chinensis HOM05D006202 ORTHO05D008227 1.1e-165 587.0 349 79.4
Nn2g15679 Nelumbo nucifera HOM05D006202 ORTHO05D008227 4.0e-165 585.1 364 76.9
Dinv43939 Davidia involucrata HOM05D006202 ORTHO05D008227 6.8e-165 584.3 346 80.1
TAR369G0651 Trochodendron aralioides HOM05D006202 ORTHO05D008227 2.0e-164 582.8 345 79.7
Aa31LG5G5070 Aethionema arabicum HOM05D006202 ORTHO05D008227 2.6e-164 582.4 369 75.6
Prupe.1G561800 Prunus persica HOM05D006202 ORTHO05D008227 2.6e-164 582.4 403 71.7
Nitab4.5_0010722g0010 Nicotiana tabacum HOM05D006202 ORTHO05D008227 3.4e-164 582.0 370 76.5
QL04p001552 Quercus lobata HOM05D006202 ORTHO05D008227 3.4e-164 582.0 345 79.1
Cc02_g26930 Coffea canephora HOM05D006202 ORTHO05D008227 1.3e-163 580.1 338 81.1
Lj9C620G10 Lonicera japonica HOM05D006202 ORTHO05D008227 1.7e-163 579.7 346 79.8
ClCG09G003710 Citrullus lanatus HOM05D006202 ORTHO05D008227 2.2e-163 579.3 355 78.9
Nitab4.5_0000468g0040 Nicotiana tabacum HOM05D006202 ORTHO05D008227 2.2e-163 579.3 364 77.7
Cfa010710 Carpinus fangiana HOM05D006202 ORTHO05D008227 2.9e-163 578.9 346 79.2
PGSC0003DMG401028974 Solanum tuberosum HOM05D006202 ORTHO05D008227 2.9e-163 578.9 346 79.5
Manes.10G152100 Manihot esculenta HOM05D006202 ORTHO05D008227 3.8e-163 578.6 348 78.7
Cpa.g.sc189.4 Carica papaya HOM05D006202 ORTHO05D008227 6.4e-163 577.8 349 79.4
CSS0029964 Camellia sinensis var. sinensis HOM05D006202 ORTHO05D008227 8.4e-163 577.4 345 79.4
FvH4_5g30330 Fragaria vesca HOM05D006202 ORTHO05D008227 8.4e-163 577.4 345 80.0
Peaxi162Scf00402g00616 Petunia axillaris HOM05D006202 ORTHO05D008227 8.4e-163 577.4 363 76.3
CAN.G129.48 Capsicum annuum HOM05D006202 ORTHO05D008227 1.1e-162 577.0 350 78.9
Actinidia21584 Actinidia chinensis HOM05D006202 ORTHO05D008227 1.4e-162 576.6 346 79.8
ATR0605G327 Amborella trichopoda HOM05D006202 ORTHO05D008227 1.9e-162 576.2 354 79.9
Medtr2g061710 Medicago truncatula HOM05D006202 ORTHO05D008227 1.9e-162 576.2 345 80.0
Thhalv10016791m.g Eutrema salsugineum HOM05D006202 ORTHO05D008227 2.4e-162 575.9 393 71.8
MD02G1319400 Malus domestica HOM05D006202 ORTHO05D008227 2.4e-162 575.9 344 79.4
TPR.G16148 Trifolium pratense HOM05D006202 ORTHO05D008227 2.4e-162 575.9 366 75.7
FAN18G2168 Fragaria x ananassa HOM05D006202 ORTHO05D008227 3.2e-162 575.5 345 79.7
Sopen01g033340 Solanum pennellii HOM05D006202 ORTHO05D008227 3.2e-162 575.5 350 78.3
FAN13G0191 Fragaria x ananassa HOM05D006202 ORTHO05D008227 5.4e-162 574.7 373 75.6
PSO384G0467 Papaver somniferum HOM05D006202 ORTHO05D008227 5.4e-162 574.7 361 77.8
THA.LOC104815880 Tarenaya hassleriana HOM05D006202 ORTHO05D008227 7.1e-162 574.3 397 72.5
Eucgr.A00275 Eucalyptus grandis HOM05D006202 ORTHO05D008227 1.2e-161 573.5 345 79.4
Glyma.08G157800 Glycine max HOM05D006202 ORTHO05D008227 1.6e-161 573.2 345 78.3
Solyc01g073730.4 Solanum lycopersicum HOM05D006202 ORTHO05D008227 1.6e-161 573.2 350 78.3
arahy.Tifrunner.gnm1.ann1.Y9YBLC Arachis hypogaea HOM05D006202 ORTHO05D008227 2.1e-161 572.8 365 75.3
Eucgr.A00079 Eucalyptus grandis HOM05D006202 ORTHO05D008227 2.1e-161 572.8 353 78.5
Haze_03268 Corylus avellana HOM05D006202 ORTHO05D008227 2.7e-161 572.4 401 71.1
Lj3g0005275 Lotus japonicus HOM05D006202 ORTHO05D008227 2.7e-161 572.4 364 75.5
PSO339G0702 Papaver somniferum HOM05D006202 ORTHO05D008227 2.7e-161 572.4 361 77.6
Carub.0004s1327 Capsella rubella HOM05D006202 ORTHO05D008227 3.5e-161 572.0 335 79.4
SGA_v2.0_scaffold5G03106 Striga asiatica HOM05D006202 ORTHO05D008227 3.5e-161 572.0 346 78.9
vmacro21164 Vaccinium macrocarpon HOM05D006202 ORTHO05D008227 3.5e-161 572.0 346 79.5
Potri.009G024100 Populus trichocarpa HOM05D006202 ORTHO05D008227 4.6e-161 571.6 346 78.0
Sp4g14320 Schrenkiella parvula HOM05D006202 ORTHO05D008227 4.6e-161 571.6 393 71.5
Oeu060701.1 Olea europaea HOM05D006202 ORTHO05D008227 6.0e-161 571.2 400 71.2
Rhsim03G0068600 Rhododendron simsii HOM05D006202 ORTHO05D008227 6.0e-161 571.2 362 76.8
arahy.Tifrunner.gnm1.ann1.03K86Q Arachis hypogaea HOM05D006202 ORTHO05D008227 7.8e-161 570.9 365 74.8
CiPaw.02G012300 Carya illinoinensis HOM05D006202 ORTHO05D008227 7.8e-161 570.9 363 76.0
Glyma.15G268400 Glycine max HOM05D006202 ORTHO05D008227 7.8e-161 570.9 364 74.5
AT2G31955 Arabidopsis thaliana HOM05D006202 ORTHO05D008227 1.3e-160 570.1 364 75.0
FAN04G1730 Fragaria x ananassa HOM05D006202 ORTHO05D008227 1.3e-160 570.1 373 74.5
BraA03t11059Z Brassica rapa HOM05D006202 ORTHO05D008227 1.7e-160 569.7 393 71.8
AL4G27290 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 2.3e-160 569.3 362 74.6
Ca_03201_v3 Cicer arietinum L. HOM05D006202 ORTHO05D008227 3.0e-160 568.9 361 75.9
FAN08G1924 Fragaria x ananassa HOM05D006202 ORTHO05D008227 8.6e-160 567.4 373 74.5
MSTRG.28100 Avicennia marina HOM05D006202 ORTHO05D008227 1.1e-159 567.0 350 78.0
BcaC01g05926 Brassica carinata HOM05D006202 ORTHO05D008227 1.1e-159 567.0 393 71.2
TWI73G0821 Tripterygium wilfordii HOM05D006202 ORTHO05D008227 1.9e-159 566.2 346 76.6
VMungo1080G0924 Vigna mungo HOM05D006202 ORTHO05D008227 2.5e-159 565.8 353 76.2
Migut.I00539 Erythranthe guttata HOM05D006202 ORTHO05D008227 3.3e-159 565.5 401 69.8
Lalb_Chr01g0015151 Lupinus albus HOM05D006202 ORTHO05D008227 4.3e-159 565.1 348 76.7
Migut.B01400 Erythranthe guttata HOM05D006202 ORTHO05D008227 7.3e-159 564.3 393 70.5
Gorai.004G013400 Gossypium raimondii HOM05D006202 ORTHO05D008227 7.3e-159 564.3 329 80.5
SalBow5G5675 Salvia bowleyana HOM05D006202 ORTHO05D008227 9.6e-159 563.9 398 70.9
Lsat_1_v5_gn_4_46560 Lactuca sativa HOM05D006202 ORTHO05D008227 1.2e-158 563.5 349 76.8
GSVIVG01001357001 Vitis vinifera HOM05D006202 ORTHO05D008227 1.2e-158 563.5 327 81.0
HPP92_023784 Vanilla planifolia HOM05D006202 ORTHO05D008227 1.6e-158 563.1 404 71.0
arahy.Tifrunner.gnm1.ann1.YK6119 Arachis hypogaea HOM05D006202 ORTHO05D008227 2.1e-158 562.8 365 74.2
COL.COLO4_07529 Corchorus olitorius HOM05D006202 ORTHO05D008227 2.1e-158 562.8 357 76.2
ECA234G4350 Erigeron canadensis HOM05D006202 ORTHO05D008227 3.6e-158 562.0 377 73.5
Duzib168G0949 Durio zibethinus HOM05D006202 ORTHO05D008227 6.2e-158 561.2 367 73.6
Gohir.D08G018900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 8.1e-158 560.8 329 79.9
Sc10g0005310 Simmondsia chinensis HOM05D006202 ORTHO05D008227 8.1e-158 560.8 348 76.7
BolC3t14483H Brassica oleracea HOM05D006202 ORTHO05D008227 1.8e-157 559.7 394 70.6
Phvul.005G042000 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 4.0e-157 558.5 345 76.8
HanXRQChr16g0520351 Helianthus annuus HOM05D006202 ORTHO05D008227 5.2e-157 558.1 329 80.2
Atru.chr11.2704 Acer truncatum HOM05D006202 ORTHO05D008227 9.0e-157 557.4 346 76.6
Ciclev10031726m.g Citrus clementina HOM05D006202 ORTHO05D008227 9.0e-157 557.4 349 75.9
Gohir.A08G008900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 1.5e-156 556.6 329 79.0
DCAR_001807 Daucus carota HOM05D006202 ORTHO05D008227 5.8e-156 554.7 346 76.3
Phvul.005G041900 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 7.6e-156 554.3 327 79.5
AUR62036652 Chenopodium quinoa HOM05D006202 ORTHO05D008227 9.9e-156 553.9 348 75.9
Ah.14g085700 Amaranthus hybridus HOM05D006202 ORTHO05D008227 1.7e-155 553.1 350 75.4
AUR62034625 Chenopodium quinoa HOM05D006202 ORTHO05D008227 2.9e-155 552.4 348 75.9
Thecc.09G200100 Theobroma cacao HOM05D006202 ORTHO05D008227 2.9e-155 552.4 350 74.0
CsaV3_7G031490 Cucumis sativus L. HOM05D006202 ORTHO05D008227 4.9e-155 551.6 318 82.1
Sabra09G0015400 Salix brachista HOM05D006202 ORTHO05D008227 1.3e-152 543.5 400 67.5
EL10Ac3g06182 Beta vulgaris HOM05D006202 ORTHO05D008227 3.0e-152 542.3 348 73.9
CANSAT80G0703 Cannabis sativa HOM05D006202 ORTHO05D008227 6.6e-152 541.2 338 75.7
unitig_749.g13486 Utricularia gibba HOM05D006202 ORTHO05D008227 1.9e-151 539.7 350 73.4
A03p17940 Brassica napus HOM05D000200 ORTHO05D000262 1.5e-143 513.5 370 69.2
C03p21020 Brassica napus HOM05D000200 ORTHO05D000262 2.5e-143 512.7 370 68.4
Pp3c5_22480 Physcomitrium patens HOM05D006202 ORTHO05D008227 4.3e-143 511.9 329 72.9
Mapoly0045s0149 Marchantia polymorpha HOM05D006202 ORTHO05D008227 8.1e-142 507.7 392 66.1
SMO361G0213 Selaginella moellendorffii HOM05D006202 ORTHO05D008227 1.4e-141 506.9 358 68.2
SEGI_40145 Sequoiadendron giganteum HOM05D006202 ORTHO05D008227 6.9e-141 504.6 354 70.3
CDE06G1615 Ceratophyllum demersum HOM05D006202 ORTHO05D008227 9.3e-138 494.2 376 66.0
CBR_g36677 Chara braunii HOM05D006202 ORTHO05D008227 1.6e-134 483.4 350 65.7
Actinidia15848 Actinidia chinensis HOM05D006202 ORTHO05D008227 3.3e-127 459.1 359 65.5
MCO15G349 Micromonas commoda HOM05D006202 ORTHO05D008227 4.6e-121 438.7 326 62.9
arahy.Tifrunner.gnm1.ann1.JS3HL2 Arachis hypogaea HOM05D006202 ORTHO05D008227 6.1e-121 438.3 348 63.5
Potri.001G230604 Populus trichocarpa HOM05D006202 ORTHO05D008227 1.5e-119 433.7 344 64.0
AL80U10060 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 7.4e-119 431.4 362 61.3
Cre13.g602901 Chlamydomonas reinhardtii HOM05D006202 ORTHO05D008227 2.7e-113 412.9 380 54.5
PRCOL_00002201 Prasinoderma coloniale HOM05D006202 ORTHO05D008227 1.5e-108 397.1 328 57.3
MELO3C023505.2 Cucumis melo HOM05D006202 ORTHO05D008227 3.8e-107 392.5 240 79.2
Pp3c6_6420 Physcomitrium patens HOM05D006202 ORTHO05D008227 7.2e-106 388.3 327 59.6
TAR369G1105 Trochodendron aralioides HOM05D006202 ORTHO05D008227 9.7e-103 377.9 230 77.0
Psat1g128920 Pisum sativum HOM05D006202 ORTHO05D008227 1.3e-102 377.5 280 68.2
CARHR125690 Cardamine hirsuta HOM05D006202 ORTHO05D008227 2.2e-102 376.7 278 67.6
Hund12940 Selenicereus undatus HOM05D006202 ORTHO05D008227 7.7e-100 368.2 245 71.8
Cfa022704 Carpinus fangiana HOM05D006202 ORTHO05D008227 1.7e-99 367.1 369 50.4
Haze_27006 Corylus avellana HOM05D006202 ORTHO05D008699 6.6e-67 258.8 287 44.9
AagrBONN_evm.TU.Sc2ySwM_344.4902 Anthoceros agrestis HOM05D006202 ORTHO05D008227 5.4e-61 239.2 180 64.4
SHI12244 Sapria himalayana HOM05D006202 ORTHO05D008227 9.2e-61 238.4 165 69.1
SHI12251 Sapria himalayana HOM05D006202 ORTHO05D008227 6.0e-60 235.7 183 65.6
ATR0605G108 Amborella trichopoda HOM05D006202 ORTHO05D008227 3.2e-45 186.8 131 69.5
SHI12245 Sapria himalayana HOM05D006202 ORTHO05D008227 2.7e-44 183.7 154 61.0
A05p13580 Brassica napus HOM05D006202 ORTHO05D033532 4.9e-14 83.2 88 48.9
BraA05t20295Z Brassica rapa HOM05D006202 ORTHO05D033532 4.9e-14 83.2 88 48.9
SHI34064 Sapria himalayana HOM05D006202 ORTHO05D367267 4.6e-12 76.6 180 36.7
TAR623G0116 Trochodendron aralioides HOM05D006202 ORTHO05D414173 9.0e-08 62.4 35 74.3


User provided reference genes

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