Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb243360 Zea mays HOM05D019841 ORTHO05D037008 0.0e+00 1541.2 880 100.0
Zm00001eb181860 Zea mays HOM05D019841 ORTHO05D037008 1.8e-242 843.2 701 74.9
Os02g0550000 Oryza sativa ssp. japonica HOM05D019841 ORTHO05D037008 3.1e-141 506.9 923 47.2
Zm00001eb422560 Zea mays HOM05D019841 ORTHO05D006509 3.4e-63 247.7 914 29.2
Zm00001eb082760 Zea mays HOM05D019841 ORTHO05D006509 7.5e-63 246.5 911 29.5
Os04g0431000 Oryza sativa ssp. japonica HOM05D019841 ORTHO05D006509 3.3e-42 177.9 328 36.3
HPP92_019365 Vanilla planifolia HOM05D005664 ORTHO05D006509 7.7e-15 87.0 157 38.9
CAN.G8.46 Capsicum annuum HOM05D005664 ORTHO05D006509 1.5e-10 72.8 186 31.2
Cc05_g15770 Coffea canephora HOM05D005664 ORTHO05D006509 1.3e-09 69.7 187 31.0
Nn7g37452 Nelumbo nucifera HOM05D005664 ORTHO05D006509 1.7e-09 69.3 88 46.6
Dinv19639 Davidia involucrata HOM05D005664 ORTHO05D006509 2.2e-09 68.9 156 33.3
Nn1g09430 Nelumbo nucifera HOM05D005664 ORTHO05D006509 4.8e-09 67.8 193 29.0
TAR629G3046 Trochodendron aralioides HOM05D005664 ORTHO05D006509 4.8e-09 67.8 146 32.9
Hma1.2p1_0193F.1_g084390 Hydrangea macrophylla HOM05D005664 ORTHO05D006509 6.3e-09 67.4 156 34.0
EL10Ac4g07635 Beta vulgaris HOM05D005664 ORTHO05D006509 8.2e-09 67.0 187 28.9
TAR627G1206 Trochodendron aralioides HOM05D005664 ORTHO05D006509 1.1e-08 66.6 154 29.9
PGSC0003DMG400002313 Solanum tuberosum HOM05D005664 ORTHO05D006509 4.1e-08 64.7 186 28.5
Oeu052022.1 Olea europaea HOM05D005664 ORTHO05D006509 5.3e-08 64.3 158 32.3
MBI14_g10255_MAGBIO Magnolia biondii HOM05D005664 ORTHO05D006509 6.9e-08 63.9 197 29.9
CSS0022030 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 1.2e-07 63.2 143 32.9
CSS0025023 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 1.2e-07 63.2 143 32.9
CDE05G2921 Ceratophyllum demersum HOM05D005664 ORTHO05D006509 1.2e-07 63.2 73 45.2
Solyc12g017230.2 Solanum lycopersicum HOM05D005664 ORTHO05D006509 1.5e-07 62.8 186 27.4
Sopen12g008050 Solanum pennellii HOM05D005664 ORTHO05D006509 2.0e-07 62.4 186 27.4
CDE11G0421 Ceratophyllum demersum HOM05D005664 ORTHO05D006509 2.6e-07 62.0 73 43.8
vmacro11645 Vaccinium macrocarpon HOM05D005664 ORTHO05D006509 4.5e-07 61.2 186 29.6
Migut.M01578 Erythranthe guttata HOM05D005664 ORTHO05D006509 1.0e-06 60.1 127 34.6
CAN.G492.59 Capsicum annuum HOM05D005664 ORTHO05D006509 1.3e-06 59.7 156 29.5
SGA_v2.0_scaffold186G40232 Striga asiatica HOM05D005664 ORTHO05D006509 2.9e-06 58.5 134 36.6
GSVIVG01014850001 Vitis vinifera HOM05D005664 ORTHO05D006509 2.9e-06 58.5 155 29.0
Lsat_1_v5_gn_7_115861 Lactuca sativa HOM05D005664 ORTHO05D006509 6.5e-06 57.4 140 30.7


User provided reference genes

Program Settings