Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb036830 Zea mays HOM05D008270 ORTHO05D000045 2.9e-66 255.0 121 100.0
Zm00001eb238500 Zea mays HOM05D008270 ORTHO05D000045 2.9e-66 255.0 121 100.0
Zm00001eb185320 Zea mays HOM05D008270 ORTHO05D010684 7.0e-60 233.8 116 94.0
Zm00001eb340200 Zea mays HOM05D008270 ORTHO05D000045 2.2e-58 228.8 116 93.1
Zm00001eb210710 Zea mays HOM05D008270 ORTHO05D000045 2.0e-54 215.7 116 84.5
Zm00001eb319180 Zea mays HOM05D008270 ORTHO05D000045 2.0e-54 215.7 116 84.5
Zm00001eb265920 Zea mays HOM05D000096 ORTHO05D000045 5.3e-52 207.6 104 93.3
Zm00001eb073960 Zea mays HOM05D008270 ORTHO05D000045 1.4e-28 129.8 67 88.1
Zm00001eb354070 Zea mays HOM05D008270 ORTHO05D000045 1.4e-28 129.8 67 88.1
Zm00001eb088010 Zea mays HOM05D008270 ORTHO05D000045 1.2e-27 126.7 67 86.6
ECA238G2729 Erigeron canadensis HOM05D000006 ORTHO05D000001 5.2e-23 111.3 118 41.5
Nn4g25156 Nelumbo nucifera HOM05D000096 ORTHO05D000045 8.9e-23 110.5 89 49.4
ECA233G5367 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.2e-22 110.2 118 44.1
ECA246G2596 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.5e-22 109.8 115 41.7
Zm00001eb009830 Zea mays HOM05D000096 ORTHO05D000045 5.4e-20 101.3 91 46.2
Zm00001eb399170 Zea mays HOM05D000096 ORTHO05D000045 5.4e-20 101.3 91 46.2
Atru.chr12.1652 Acer truncatum HOM05D000096 ORTHO05D000045 3.9e-18 95.1 91 45.1
Cc02_g03810 Coffea canephora HOM05D000096 ORTHO05D000045 3.3e-17 92.0 91 39.6
Oeu029244.1 Olea europaea HOM05D000096 ORTHO05D000045 3.3e-17 92.0 92 42.4
Oeu050616.1 Olea europaea HOM05D000096 ORTHO05D000045 4.3e-17 91.7 92 40.2
Oeu032904.1 Olea europaea HOM05D000096 ORTHO05D000045 5.6e-17 91.3 87 43.7
Oeu049717.1 Olea europaea HOM05D000096 ORTHO05D000045 7.3e-17 90.9 92 40.2
SGA_v2.0_scaffold346G49531 Striga asiatica HOM05D006612 ORTHO05D009014 7.3e-17 90.9 120 37.5
Zm00001eb381320 Zea mays HOM05D008064 ORTHO05D000045 7.3e-17 90.9 43 97.7
SGA_v2.0_scaffold257G45688 Striga asiatica HOM05D000011 ORTHO05D000018 9.5e-17 90.5 82 42.7
Atru.chr4.2124 Acer truncatum HOM05D000096 ORTHO05D000045 1.2e-16 90.1 90 42.2
Cc01_g04040 Coffea canephora HOM05D000096 ORTHO05D000045 1.6e-16 89.7 107 32.7
Dinv14086 Davidia involucrata HOM05D000096 ORTHO05D000045 2.1e-16 89.4 97 38.1
Zm00001eb009210 Zea mays HOM05D008270 ORTHO05D000045 2.1e-16 89.4 45 93.3
Oeu061729.1 Olea europaea HOM05D000096 ORTHO05D000045 4.7e-16 88.2 92 39.1
Oeu007778.1 Olea europaea HOM05D000096 ORTHO05D000045 6.2e-16 87.8 92 39.1
EL10Ac5g11698 Beta vulgaris HOM05D007854 ORTHO05D010168 8.1e-16 87.4 90 44.4
CANSAT01G2209 Cannabis sativa HOM05D000096 ORTHO05D000045 1.1e-15 87.0 92 37.0
CANSAT56G4396 Cannabis sativa HOM05D000096 ORTHO05D000045 1.1e-15 87.0 92 37.0
Oeu046629.1 Olea europaea HOM05D000096 ORTHO05D000045 1.1e-15 87.0 92 40.2
SGA_v2.0_scaffold66G22505 Striga asiatica HOM05D000096 ORTHO05D000045 1.1e-15 87.0 85 42.4
CANSAT64G1799 Cannabis sativa HOM05D000096 ORTHO05D000045 1.4e-15 86.7 94 36.2
Migut.M00581 Erythranthe guttata HOM05D000096 ORTHO05D000045 1.4e-15 86.7 89 44.9
ECA240G2992 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.8e-15 86.3 86 44.2
Oeu037932.1 Olea europaea HOM05D000096 ORTHO05D000045 1.8e-15 86.3 88 37.5
EL10Ac5g10500 Beta vulgaris HOM05D000096 ORTHO05D000045 2.3e-15 85.9 86 43.0
CANSAT80G1195 Cannabis sativa HOM05D000096 ORTHO05D000045 2.3e-15 85.9 92 37.0
CAN.G414.4 Capsicum annuum HOM05D000096 ORTHO05D000045 2.3e-15 85.9 91 36.3
Cc03_g09110 Coffea canephora HOM05D000096 ORTHO05D000045 2.3e-15 85.9 118 36.4
CiPaw.10G120300 Carya illinoinensis HOM05D000096 ORTHO05D000045 4.0e-15 85.1 106 34.9
Atru.chr2.1644 Acer truncatum HOM05D000096 ORTHO05D000045 6.8e-15 84.3 92 37.0
Oeu027785.3 Olea europaea HOM05D000096 ORTHO05D000045 6.8e-15 84.3 87 41.4
Oeu024546.1 Olea europaea HOM05D000096 ORTHO05D000045 8.9e-15 84.0 92 37.0
Oeu054515.1 Olea europaea HOM05D000096 ORTHO05D000045 8.9e-15 84.0 92 39.1
CiPaw.08G169300 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.2e-14 83.6 93 37.6
ECA233G4800 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.2e-14 83.6 92 42.4
Oeu038389.1 Olea europaea HOM05D000096 ORTHO05D000045 1.5e-14 83.2 82 45.1
CANSAT78G0229 Cannabis sativa HOM05D000096 ORTHO05D000045 2.0e-14 82.8 92 35.9
CiPaw.02G003800 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.0e-14 82.8 112 33.0
CiPaw.03G085400 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.0e-14 82.8 106 33.0
CiPaw.14G013400 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.0e-14 82.8 106 33.0
EL10Ac1g01294 Beta vulgaris HOM05D000096 ORTHO05D000045 2.6e-14 82.4 86 38.4
CiPaw.01G182600 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.6e-14 82.4 93 37.6
CiPaw.08G106200 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.6e-14 82.4 93 36.6
CiPaw.09G168700 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.6e-14 82.4 93 36.6
Hund19738 Selenicereus undatus HOM05D000023 ORTHO05D003407 2.6e-14 82.4 86 38.4
CANSAT64G0254 Cannabis sativa HOM05D000096 ORTHO05D000045 3.4e-14 82.0 92 34.8
EL10Ac7g17443 Beta vulgaris HOM05D007854 ORTHO05D000045 4.4e-14 81.6 86 37.2
CiPaw.09G189900 Carya illinoinensis HOM05D000096 ORTHO05D000045 4.4e-14 81.6 93 35.5
CiPaw.09G160200 Carya illinoinensis HOM05D000096 ORTHO05D000045 7.5e-14 80.9 106 33.0
CANSAT25G0106 Cannabis sativa HOM05D000096 ORTHO05D000045 9.8e-14 80.5 117 31.6
CiPaw.06G111300 Carya illinoinensis HOM05D000096 ORTHO05D000045 9.8e-14 80.5 93 34.4
ECA058G0002 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.3e-13 80.1 100 39.0
CANSAT01G2838 Cannabis sativa HOM05D000096 ORTHO05D000045 1.7e-13 79.7 96 35.4
CiPaw.09G061200 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.7e-13 79.7 93 36.6
ECA246G2421 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.7e-13 79.7 92 41.3
Oeu039129.1 Olea europaea HOM05D000096 ORTHO05D000045 1.7e-13 79.7 103 35.0
SGA_v2.0_scaffold19G08816 Striga asiatica HOM05D006612 ORTHO05D009014 1.7e-13 79.7 92 38.0
CiPaw.01G012000 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.9e-13 79.0 121 30.6
CiPaw.15G028600 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.9e-13 79.0 121 30.6
Oeu053514.1 Olea europaea HOM05D000096 ORTHO05D000045 2.9e-13 79.0 82 41.5
QL11p039347 Quercus lobata HOM05D000096 ORTHO05D000045 2.9e-13 79.0 93 31.2
SGA_v2.0_scaffold131G34426 Striga asiatica HOM05D000096 ORTHO05D010595 2.9e-13 79.0 90 36.7
CiPaw.10G073400 Carya illinoinensis HOM05D000096 ORTHO05D000045 3.7e-13 78.6 90 36.7
CANSAT25G0821 Cannabis sativa HOM05D000096 ORTHO05D000045 6.4e-13 77.8 116 31.9
CiPaw.13G069100 Carya illinoinensis HOM05D000096 ORTHO05D000045 8.3e-13 77.4 106 31.1
Cc00_g07260 Coffea canephora HOM05D000096 ORTHO05D000045 8.3e-13 77.4 83 38.6
CiPaw.15G180000 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.1e-12 77.0 90 36.7
EL10Ac6g15055 Beta vulgaris HOM05D000096 ORTHO05D000045 1.9e-12 76.3 83 38.6
CAN.G834.13 Capsicum annuum HOM05D000096 ORTHO05D000045 1.9e-12 76.3 87 35.6
CANSAT11G0363 Cannabis sativa HOM05D000096 ORTHO05D000045 2.4e-12 75.9 74 36.5
AUR62027939 Chenopodium quinoa HOM05D000096 ORTHO05D000045 2.4e-12 75.9 87 35.6
Oeu024349.1 Olea europaea HOM05D000096 ORTHO05D000045 2.4e-12 75.9 117 30.8
Oeu054130.1 Olea europaea HOM05D000096 ORTHO05D000045 2.4e-12 75.9 111 30.6
Oeu023669.1 Olea europaea HOM05D000096 ORTHO05D000045 3.2e-12 75.5 99 34.3
Oeu007468.1 Olea europaea HOM05D000096 ORTHO05D000045 5.4e-12 74.7 93 32.3
Oeu014096.1 Olea europaea HOM05D000096 ORTHO05D000045 5.4e-12 74.7 97 32.0
Oeu049358.1 Olea europaea HOM05D000096 ORTHO05D000045 1.2e-11 73.6 88 33.0
Oeu031271.1 Olea europaea HOM05D000096 ORTHO05D000045 1.6e-11 73.2 92 34.8
CANSAT64G1628 Cannabis sativa HOM05D000096 ORTHO05D000045 2.7e-11 72.4 83 34.9
Zm00001eb082010 Zea mays HOM05D008270 ORTHO05D000045 3.5e-11 72.0 36 94.4
CiPaw.01G296900 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.0e-10 70.5 85 35.3
EL10Ac8g19546 Beta vulgaris HOM05D000096 ORTHO05D000045 1.3e-10 70.1 83 36.1
Oeu032961.1 Olea europaea HOM05D000096 ORTHO05D000045 3.9e-10 68.6 90 33.3
Zm00001eb245660 Zea mays HOM05D002425 ORTHO05D002709 8.6e-10 67.4 32 96.9
CiPaw.01G147400 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.1e-09 67.0 86 32.6
CiPaw.09G109800 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.1e-09 67.0 69 39.1
SGA_v2.0_scaffold160G37714 Striga asiatica HOM05D018457 ORTHO05D000045 1.1e-09 67.0 78 38.5
Medtr0030s0140 Medicago truncatula HOM05D000096 ORTHO05D000045 2.5e-09 65.9 74 33.8
CANSAT80G1310 Cannabis sativa HOM05D000096 ORTHO05D000045 2.8e-08 62.4 66 36.4
Oeu031952.1 Olea europaea HOM05D000096 ORTHO05D000045 2.8e-08 62.4 73 35.6
CiPaw.11G156500 Carya illinoinensis HOM05D000096 ORTHO05D000045 3.6e-08 62.0 79 34.2
CAN.G273.19 Capsicum annuum HOM05D000096 ORTHO05D000045 6.2e-08 61.2 79 35.4
SGA_v2.0_scaffold142G35702 Striga asiatica HOM05D000096 ORTHO05D000045 8.1e-08 60.8 85 40.0
BraA08t32675Z Brassica rapa HOM05D000096 ORTHO05D000045 1.4e-07 60.1 113 35.4
EL10Ac7g17587 Beta vulgaris HOM05D000096 ORTHO05D000045 2.3e-07 59.3 77 32.5
A08p06590 Brassica napus HOM05D000096 ORTHO05D000045 2.3e-07 59.3 113 35.4
Oeu062429.1 Olea europaea HOM05D000096 ORTHO05D000045 4.0e-07 58.5 85 29.4
CiPaw.10G120400 Carya illinoinensis HOM05D000096 ORTHO05D000045 6.8e-07 57.8 77 32.5
Oeu017669.1 Olea europaea HOM05D000096 ORTHO05D000045 6.8e-07 57.8 73 30.1
BolC5t33121H Brassica oleracea HOM05D000096 ORTHO05D000045 8.9e-07 57.4 101 35.6
Pp3c7_6800 Physcomitrium patens HOM05D000096 ORTHO05D000045 1.5e-06 56.6 91 35.2
Oeu017741.1 Olea europaea HOM05D000096 ORTHO05D000045 4.4e-06 55.1 73 30.1
CAN.G741.30 Capsicum annuum HOM05D000096 ORTHO05D000045 5.8e-06 54.7 69 37.7
A02p04280 Brassica napus HOM05D000096 ORTHO05D015453 7.6e-06 54.3 116 31.9
C02p51520 Brassica napus HOM05D000096 ORTHO05D000045 7.6e-06 54.3 116 31.9
C06p17110 Brassica napus HOM05D000096 ORTHO05D000045 7.6e-06 54.3 116 31.9
C07p39820 Brassica napus HOM05D000096 ORTHO05D000045 7.6e-06 54.3 122 28.7
COL.COLO4_04313 Corchorus olitorius HOM05D000096 ORTHO05D000045 7.6e-06 54.3 116 29.3
ECA240G0844 Erigeron canadensis HOM05D000096 ORTHO05D000045 7.6e-06 54.3 56 39.3


User provided reference genes

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