Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb238460 Zea mays HOM05D007153 ORTHO05D008769 1.5e-147 526.2 270 100.0
Os02g0320300 Oryza sativa ssp. japonica HOM05D007153 ORTHO05D008769 1.7e-82 310.1 204 75.0
Ciclev10021578m.g Citrus clementina HOM05D007153 ORTHO05D008769 1.3e-45 187.6 204 49.0
Psat1g008400 Pisum sativum HOM05D007153 ORTHO05D008769 3.7e-45 186.0 224 45.1
CSS0012595 Camellia sinensis var. sinensis HOM05D007153 ORTHO05D008769 6.3e-45 185.3 201 49.3
CsaV3_4G032710 Cucumis sativus L. HOM05D007153 ORTHO05D008769 8.3e-45 184.9 204 49.0
Dinv26693 Davidia involucrata HOM05D007153 ORTHO05D008769 1.1e-44 184.5 209 49.3
Lj1A822T45 Lonicera japonica HOM05D007153 ORTHO05D008769 3.1e-44 183.0 209 47.4
GSVIVG01014069001 Vitis vinifera HOM05D007153 ORTHO05D008769 3.1e-44 183.0 204 48.5
PSO832G0017 Papaver somniferum HOM05D007153 ORTHO05D008769 4.1e-44 182.6 206 47.6
CiPaw.11G154200 Carya illinoinensis HOM05D007153 ORTHO05D008769 5.4e-44 182.2 204 48.0
Haze_08464 Corylus avellana HOM05D007153 ORTHO05D008769 5.4e-44 182.2 204 48.5
Sed0027291 Sechium edule HOM05D007153 ORTHO05D008769 7.0e-44 181.8 204 48.0
MBI07_g07830_MAGBIO Magnolia biondii HOM05D007153 ORTHO05D008769 9.1e-44 181.4 204 50.5
THA.LOC104810421 Tarenaya hassleriana HOM05D007153 ORTHO05D008769 1.6e-43 180.6 200 49.0
ClCG11G017050 Citrullus lanatus HOM05D007153 ORTHO05D008769 2.0e-43 180.3 204 48.5
FAN25G3240 Fragaria x ananassa HOM05D007153 ORTHO05D008769 2.7e-43 179.9 204 47.1
FvH4_3g17350 Fragaria vesca HOM05D007153 ORTHO05D008769 4.5e-43 179.1 204 47.5
MELO3C016680.2 Cucumis melo HOM05D007153 ORTHO05D008769 5.9e-43 178.7 204 48.5
PSO063G3995 Papaver somniferum HOM05D007153 ORTHO05D008769 5.9e-43 178.7 206 46.6
TWI38G0031 Tripterygium wilfordii HOM05D007153 ORTHO05D008769 5.9e-43 178.7 208 44.2
MD03G1252100 Malus domestica HOM05D007153 ORTHO05D008769 7.7e-43 178.3 204 47.1
Eucgr.F01378 Eucalyptus grandis HOM05D007153 ORTHO05D008769 1.0e-42 177.9 206 46.1
Cfa019490 Carpinus fangiana HOM05D007153 ORTHO05D008769 1.7e-42 177.2 204 48.0
Prupe.4G153500 Prunus persica HOM05D007153 ORTHO05D008769 2.3e-42 176.8 204 46.6
Duzib213G0031 Durio zibethinus HOM05D007153 ORTHO05D008769 3.8e-42 176.0 204 46.1
QL08p027831 Quercus lobata HOM05D007153 ORTHO05D008769 8.6e-42 174.9 204 46.6
Sabra11G0083600 Salix brachista HOM05D007153 ORTHO05D008769 8.6e-42 174.9 209 46.9
Potri.011G101800 Populus trichocarpa HOM05D007153 ORTHO05D008769 1.1e-41 174.5 209 46.4
BraA06t23324Z Brassica rapa HOM05D007153 ORTHO05D008769 1.9e-41 173.7 206 47.6
RcHm_v2.0_Chr5g0028871 Rosa chinensis HOM05D007153 ORTHO05D008769 2.5e-41 173.3 204 46.6
A06p00970 Brassica napus HOM05D007153 ORTHO05D008769 4.2e-41 172.6 206 47.1
MD11G1273600 Malus domestica HOM05D007153 ORTHO05D008769 4.2e-41 172.6 203 46.3
AL1G62070 Arabidopsis lyrata HOM05D007153 ORTHO05D008769 5.6e-41 172.2 207 45.9
Hma1.2p1_0713F.1_g207790 Hydrangea macrophylla HOM05D007153 ORTHO05D008769 5.6e-41 172.2 195 48.2
Lsat_1_v5_gn_7_100481 Lactuca sativa HOM05D007153 ORTHO05D008769 7.2e-41 171.8 210 43.3
Carub.0001s4270 Capsella rubella HOM05D007153 ORTHO05D008769 9.5e-41 171.4 256 41.8
ECA236G0620 Erigeron canadensis HOM05D007153 ORTHO05D008769 9.5e-41 171.4 204 43.1
Migut.H02033 Erythranthe guttata HOM05D007153 ORTHO05D008769 9.5e-41 171.4 208 45.2
Aa31LG10G1690 Aethionema arabicum HOM05D007153 ORTHO05D008769 1.6e-40 170.6 197 46.7
Peaxi162Scf00111g01220 Petunia axillaris HOM05D007153 ORTHO05D008769 1.6e-40 170.6 209 45.0
Rhsim06G0187600 Rhododendron simsii HOM05D007153 ORTHO05D008769 1.6e-40 170.6 201 46.3
Sc03g0010790 Simmondsia chinensis HOM05D007153 ORTHO05D008769 1.6e-40 170.6 204 45.6
BcaB07g33323 Brassica carinata HOM05D007153 ORTHO05D008769 2.1e-40 170.2 202 46.5
DCAR_017582 Daucus carota HOM05D007153 ORTHO05D008769 2.1e-40 170.2 209 47.8
Thhalv10011696m.g Eutrema salsugineum HOM05D007153 ORTHO05D008769 2.8e-40 169.9 202 46.0
TPR.G6902 Trifolium pratense HOM05D007153 ORTHO05D008769 2.8e-40 169.9 204 44.6
Ah.06g187590 Amaranthus hybridus HOM05D007153 ORTHO05D008769 3.6e-40 169.5 204 47.1
Solyc07g062030.3 Solanum lycopersicum HOM05D007153 ORTHO05D008769 3.6e-40 169.5 204 44.6
Aqoxy1G01815 Aquilegia oxysepala HOM05D007153 ORTHO05D008769 4.7e-40 169.1 197 44.7
AUR62019681 Chenopodium quinoa HOM05D007153 ORTHO05D008769 4.7e-40 169.1 204 45.1
PGR083G2631 Punica granatum HOM05D007153 ORTHO05D008769 4.7e-40 169.1 195 47.2
CAN.G375.63 Capsicum annuum HOM05D007153 ORTHO05D008769 6.1e-40 168.7 201 44.8
Hund10387 Selenicereus undatus HOM05D007153 ORTHO05D008769 6.1e-40 168.7 204 46.1
Sopen07g030290 Solanum pennellii HOM05D007153 ORTHO05D008769 6.1e-40 168.7 204 44.6
Ca_03417_v3 Cicer arietinum L. HOM05D007153 ORTHO05D008769 8.0e-40 168.3 206 45.1
Ca_29738_v3 Cicer arietinum L. HOM05D007153 ORTHO05D008769 8.0e-40 168.3 206 45.1
Medtr2g072510 Medicago truncatula HOM05D007153 ORTHO05D008769 8.0e-40 168.3 204 44.1
Thecc.07G140300 Theobroma cacao HOM05D007153 ORTHO05D008769 8.0e-40 168.3 204 45.1
vmacro11989 Vaccinium macrocarpon HOM05D007153 ORTHO05D008769 8.0e-40 168.3 204 43.6
Glyma.13G262500 Glycine max HOM05D007153 ORTHO05D008769 1.4e-39 167.5 204 45.1
Lalb_Chr01g0016241 Lupinus albus HOM05D007153 ORTHO05D008769 1.4e-39 167.5 204 44.6
CARHR043760 Cardamine hirsuta HOM05D007153 ORTHO05D008769 1.8e-39 167.2 202 45.5
BcaC08g43538 Brassica carinata HOM05D007153 ORTHO05D008769 2.3e-39 166.8 237 41.8
BolC6t36005H Brassica oleracea HOM05D007153 ORTHO05D008769 2.3e-39 166.8 237 41.8
AUR62039568 Chenopodium quinoa HOM05D007153 ORTHO05D008769 2.3e-39 166.8 204 45.1
Glyma.15G242900 Glycine max HOM05D007153 ORTHO05D008769 2.3e-39 166.8 204 45.1
HanXRQChr15g0495311 Helianthus annuus HOM05D007153 ORTHO05D008769 2.3e-39 166.8 204 41.7
Nitab4.5_0003618g0090 Nicotiana tabacum HOM05D007153 ORTHO05D008769 2.3e-39 166.8 201 45.8
Cc05_g10530 Coffea canephora HOM05D007153 ORTHO05D008769 3.0e-39 166.4 204 45.1
Lj3g0020060 Lotus japonicus HOM05D007153 ORTHO05D008769 3.0e-39 166.4 204 45.6
AT1G53520 Arabidopsis thaliana HOM05D007153 ORTHO05D008769 4.0e-39 166.0 207 44.9
PGSC0003DMG400007056 Solanum tuberosum HOM05D007153 ORTHO05D008769 4.0e-39 166.0 204 43.6
Atru.chr2.1920 Acer truncatum HOM05D007153 ORTHO05D008769 5.2e-39 165.6 197 45.7
Gohir.D13G155400 Gossypium hirsutum HOM05D007153 ORTHO05D008769 1.2e-38 164.5 204 44.6
C06p09270 Brassica napus HOM05D007153 ORTHO05D008769 2.6e-38 163.3 206 44.2
COL.COLO4_17448 Corchorus olitorius HOM05D007153 ORTHO05D008769 2.6e-38 163.3 204 43.1
Gorai.013G176000 Gossypium raimondii HOM05D007153 ORTHO05D008769 2.6e-38 163.3 204 44.6
SGA_v2.0_scaffold130G34251 Striga asiatica HOM05D007153 ORTHO05D008769 2.6e-38 163.3 204 45.1
unitig_747.g21594 Utricularia gibba HOM05D007153 ORTHO05D008769 2.6e-38 163.3 206 43.7
MSTRG.14258 Avicennia marina HOM05D007153 ORTHO05D008769 4.4e-38 162.5 208 43.8
Nn3g20646 Nelumbo nucifera HOM05D007153 ORTHO05D008769 4.4e-38 162.5 204 44.1
CANSAT56G2533 Cannabis sativa HOM05D007153 ORTHO05D008769 9.8e-38 161.4 204 42.2
Sp1g40050 Schrenkiella parvula HOM05D007153 ORTHO05D008769 9.8e-38 161.4 206 43.7
arahy.Tifrunner.gnm1.ann1.C8MR0W Arachis hypogaea HOM05D007153 ORTHO05D008769 1.3e-37 161.0 204 43.6
CDE04G0295 Ceratophyllum demersum HOM05D007153 ORTHO05D008769 1.7e-37 160.6 190 48.9
VMungo1080G0806 Vigna mungo HOM05D007153 ORTHO05D008769 2.9e-37 159.8 204 45.6
arahy.Tifrunner.gnm1.ann1.57A972 Arachis hypogaea HOM05D007153 ORTHO05D008769 6.4e-37 158.7 204 43.1
Atru.chr2.1917 Acer truncatum HOM05D007153 ORTHO05D008769 8.3e-37 158.3 197 44.2
Phvul.005G064500 Phaseolus vulgaris HOM05D007153 ORTHO05D008769 4.1e-36 156.0 204 42.6
Phvul.005G064600 Phaseolus vulgaris HOM05D007153 ORTHO05D008769 4.3e-33 146.0 204 41.2
Potri.001G380700 Populus trichocarpa HOM05D007153 ORTHO05D008769 4.0e-31 139.4 182 42.9
EL10Ac4g08449 Beta vulgaris HOM05D007153 ORTHO05D008769 9.8e-30 134.8 166 46.4
Nitab4.5_0001140g0070 Nicotiana tabacum HOM05D007153 ORTHO05D008769 8.3e-29 131.7 149 47.0
Manes.15G100200 Manihot esculenta HOM05D007153 ORTHO05D008769 2.4e-28 130.2 153 47.7
Cpa.g.sc77.72 Carica papaya HOM05D007153 ORTHO05D008769 2.0e-27 127.1 146 47.9
FAN11G0553 Fragaria x ananassa HOM05D007153 ORTHO05D008769 6.0e-27 125.6 126 53.2
FAN16G1619 Fragaria x ananassa HOM05D007153 ORTHO05D008769 6.0e-27 125.6 126 53.2
Pp3c10_20100 Physcomitrium patens HOM05D007153 ORTHO05D008769 2.8e-24 116.7 208 33.7
Mapoly0044s0117 Marchantia polymorpha HOM05D007153 ORTHO05D008769 1.4e-23 114.4 200 37.0
Mapoly0077s0003 Marchantia polymorpha HOM05D007153 ORTHO05D008769 1.4e-23 114.4 201 36.8
Cc00_g00040 Coffea canephora HOM05D007153 ORTHO05D008769 2.3e-23 113.6 200 35.5
AagrBONN_evm.TU.Sc2ySwM_228.3568 Anthoceros agrestis HOM05D007153 ORTHO05D008769 3.5e-19 99.8 148 36.5
SMO147G0119 Selaginella moellendorffii HOM05D007153 ORTHO05D008769 2.1e-11 73.9 121 33.9
Sabra11G0085100 Salix brachista HOM05D007153 ORTHO05D008769 9.6e-09 65.1 102 39.2
Cre01.g007600 Chlamydomonas reinhardtii HOM05D007153 ORTHO05D008769 2.4e-07 60.5 204 29.4
Cpa.g.sc19.60 Carica papaya HOM05D006808 ORTHO05D008610 2.6e-06 57.0 202 23.8
ECA233G3418 Erigeron canadensis HOM05D006808 ORTHO05D008610 3.4e-06 56.6 203 24.1
Lalb_Chr02g0143921 Lupinus albus HOM05D003362 ORTHO05D003783 4.4e-06 56.2 209 23.9
Lj8A55T83 Lonicera japonica HOM05D006808 ORTHO05D008610 7.6e-06 55.5 142 30.3


User provided reference genes

Program Settings