Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb233160 Zea mays HOM05D000872 ORTHO05D445886 3.0e-51 204.9 106 100.0
Zm00001eb345450 Zea mays HOM05D000872 ORTHO05D000777 6.2e-12 74.3 58 74.1
MD12G1165800 Malus domestica HOM05D000872 ORTHO05D000777 1.6e-07 59.7 59 57.6
CANSAT35G1350 Cannabis sativa HOM05D000872 ORTHO05D000777 2.1e-07 59.3 58 56.9
Eucgr.A00502 Eucalyptus grandis HOM05D000872 ORTHO05D000777 2.1e-07 59.3 66 53.0
Os05g0594200 Oryza sativa ssp. japonica HOM05D000872 ORTHO05D000777 2.7e-07 58.9 65 55.4
MD04G1151600 Malus domestica HOM05D000872 ORTHO05D000777 4.6e-07 58.2 59 57.6
Os01g0557500 Oryza sativa ssp. japonica HOM05D000872 ORTHO05D000777 2.3e-06 55.8 58 58.6
Rhsim05G0214700 Rhododendron simsii HOM05D000872 ORTHO05D000777 2.3e-06 55.8 58 51.7
Potri.006G099900 Populus trichocarpa HOM05D000872 ORTHO05D000777 3.9e-06 55.1 58 51.7
Potri.016G115500 Populus trichocarpa HOM05D000872 ORTHO05D000777 3.9e-06 55.1 58 53.4
Sabra16G0111400 Salix brachista HOM05D000872 ORTHO05D000777 3.9e-06 55.1 58 53.4
Sc22g0002490 Simmondsia chinensis HOM05D000872 ORTHO05D000777 3.9e-06 55.1 66 53.0
Cpa.g.sc11.155 Carica papaya HOM05D000872 ORTHO05D000777 5.1e-06 54.7 58 51.7
AUR62010463 Chenopodium quinoa HOM05D000872 ORTHO05D000777 5.1e-06 54.7 70 48.6
THA.LOC104806608 Tarenaya hassleriana HOM05D000872 ORTHO05D000777 5.1e-06 54.7 59 52.5
THA.LOC104816189 Tarenaya hassleriana HOM05D000872 ORTHO05D000777 5.1e-06 54.7 58 56.9
GSVIVG01033962001 Vitis vinifera HOM05D000872 ORTHO05D000777 5.1e-06 54.7 58 50.0
CSS0036754 Camellia sinensis var. sinensis HOM05D000872 ORTHO05D000777 6.6e-06 54.3 58 50.0
PGR031G3540 Punica granatum HOM05D000872 ORTHO05D000777 8.6e-06 53.9 58 53.4
Hund11013 Selenicereus undatus HOM05D000872 ORTHO05D000777 8.6e-06 53.9 58 51.7


User provided reference genes

Program Settings