Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb231390 Zea mays HOM05D007121 ORTHO05D009116 1.8e-128 462.6 238 100.0
Zm00001eb064170 Zea mays HOM05D007121 ORTHO05D009116 7.0e-64 248.1 187 75.4
Os01g0887400 Oryza sativa ssp. japonica HOM05D007121 ORTHO05D009116 3.3e-61 239.2 168 73.8
CsaV3_5G039330 Cucumis sativus L. HOM05D007121 ORTHO05D009116 2.5e-53 213.0 169 65.7
Phvul.004G131500 Phaseolus vulgaris HOM05D007121 ORTHO05D009116 1.2e-52 210.7 171 66.7
MELO3C022111.2 Cucumis melo HOM05D007121 ORTHO05D009116 1.6e-52 210.3 169 65.1
ATR1089G073 Amborella trichopoda HOM05D007121 ORTHO05D009116 2.1e-52 209.9 168 65.5
Thecc.08G167200 Theobroma cacao HOM05D007121 ORTHO05D009116 2.1e-52 209.9 167 66.5
TAR381G0948 Trochodendron aralioides HOM05D007121 ORTHO05D009116 2.1e-52 209.9 171 66.7
Dinv37393 Davidia involucrata HOM05D007121 ORTHO05D009116 2.8e-52 209.5 171 66.7
PGSC0003DMG400009256 Solanum tuberosum HOM05D007121 ORTHO05D009116 2.8e-52 209.5 168 67.3
CAN.G746.3 Capsicum annuum HOM05D007121 ORTHO05D009116 3.6e-52 209.1 174 64.9
Glyma.16G207000 Glycine max HOM05D007121 ORTHO05D009116 3.6e-52 209.1 168 67.3
Solyc11g020590.2 Solanum lycopersicum HOM05D007121 ORTHO05D009116 3.6e-52 209.1 168 67.3
MBI03_g28961_MAGBIO Magnolia biondii HOM05D007121 ORTHO05D009116 4.7e-52 208.8 167 66.5
Sopen11g020950 Solanum pennellii HOM05D007121 ORTHO05D009116 4.7e-52 208.8 168 66.7
COL.COLO4_25112 Corchorus olitorius HOM05D007121 ORTHO05D009116 6.2e-52 208.4 168 66.7
Eucgr.F02930 Eucalyptus grandis HOM05D007121 ORTHO05D009116 8.0e-52 208.0 171 66.1
Sabra19G0077000 Salix brachista HOM05D007121 ORTHO05D009116 8.0e-52 208.0 181 61.3
Actinidia09045 Actinidia chinensis HOM05D007121 ORTHO05D009116 1.1e-51 207.6 168 65.5
arahy.Tifrunner.gnm1.ann1.MG1LG0 Arachis hypogaea HOM05D007121 ORTHO05D009116 1.1e-51 207.6 171 65.5
arahy.Tifrunner.gnm1.ann1.S3NXR5 Arachis hypogaea HOM05D007121 ORTHO05D009116 1.1e-51 207.6 171 65.5
HanXRQChr08g0227551 Helianthus annuus HOM05D007121 ORTHO05D009116 1.1e-51 207.6 171 66.1
Lj2g0026463 Lotus japonicus HOM05D007121 ORTHO05D009116 1.1e-51 207.6 171 64.3
GSVIVG01037090001 Vitis vinifera HOM05D007121 ORTHO05D009116 1.1e-51 207.6 171 64.3
Nn5g27126 Nelumbo nucifera HOM05D007121 ORTHO05D009116 1.4e-51 207.2 171 64.9
Medtr6g059330 Medicago truncatula HOM05D007121 ORTHO05D009116 1.8e-51 206.8 167 66.5
TPR.G5822 Trifolium pratense HOM05D007121 ORTHO05D009116 1.8e-51 206.8 171 64.9
Lsat_1_v5_gn_1_24881 Lactuca sativa HOM05D000912 ORTHO05D001232 2.3e-51 206.5 172 65.7
Nitab4.5_0000365g0210 Nicotiana tabacum HOM05D007121 ORTHO05D009116 2.3e-51 206.5 162 67.3
Sabra19G0079800 Salix brachista HOM05D007121 ORTHO05D009116 2.3e-51 206.5 181 61.3
Sed0003038 Sechium edule HOM05D007121 ORTHO05D009116 3.1e-51 206.1 171 62.0
vmacro00902 Vaccinium macrocarpon HOM05D007121 ORTHO05D009116 3.1e-51 206.1 168 66.7
Gorai.004G265300 Gossypium raimondii HOM05D007121 ORTHO05D009116 4.0e-51 205.7 171 64.9
Hma1.2p1_0378F.1_g139780 Hydrangea macrophylla HOM05D007121 ORTHO05D009116 6.8e-51 204.9 171 64.9
Rhsim12G0000200 Rhododendron simsii HOM05D007121 ORTHO05D009116 6.8e-51 204.9 167 65.9
Cc11_g03660 Coffea canephora HOM05D007121 ORTHO05D009116 8.9e-51 204.5 165 64.8
Haze_14021 Corylus avellana HOM05D007121 ORTHO05D009116 8.9e-51 204.5 167 65.9
FAN15G1171 Fragaria x ananassa HOM05D007121 ORTHO05D009116 8.9e-51 204.5 170 65.9
FAN24G2591 Fragaria x ananassa HOM05D007121 ORTHO05D009116 8.9e-51 204.5 170 65.9
Manes.07G083700 Manihot esculenta HOM05D007121 ORTHO05D009116 8.9e-51 204.5 167 65.3
Hund06356 Selenicereus undatus HOM05D007121 ORTHO05D009116 8.9e-51 204.5 171 64.9
TWI79G1141 Tripterygium wilfordii HOM05D007121 ORTHO05D009116 8.9e-51 204.5 168 63.1
Zm00001eb327850 Zea mays HOM05D007121 ORTHO05D009116 8.9e-51 204.5 169 71.0
unitig_62.g23943 Utricularia gibba HOM05D007121 ORTHO05D009116 1.2e-50 204.1 168 66.1
CSS0045313 Camellia sinensis var. sinensis HOM05D007121 ORTHO05D009116 1.5e-50 203.8 164 65.9
Gohir.D08G248700 Gossypium hirsutum HOM05D007121 ORTHO05D009116 1.5e-50 203.8 171 64.3
MSTRG.21285 Avicennia marina HOM05D007121 ORTHO05D009116 2.0e-50 203.4 164 67.7
AUR62010183 Chenopodium quinoa HOM05D007121 ORTHO05D009116 2.0e-50 203.4 168 66.1
Sc13g0008970 Simmondsia chinensis HOM05D007121 ORTHO05D009116 2.0e-50 203.4 168 63.7
Lj7C414G3 Lonicera japonica HOM05D000916 ORTHO05D007921 2.6e-50 203.0 189 59.8
Nitab4.5_0003818g0010 Nicotiana tabacum HOM05D007121 ORTHO05D009116 2.6e-50 203.0 181 60.2
PSO170G2993 Papaver somniferum HOM05D007121 ORTHO05D009116 2.6e-50 203.0 171 63.2
Potri.019G063800 Populus trichocarpa HOM05D007121 ORTHO05D009116 2.6e-50 203.0 171 63.2
Aqoxy6G00014 Aquilegia oxysepala HOM05D007121 ORTHO05D009116 3.4e-50 202.6 178 65.7
AUR62013185 Chenopodium quinoa HOM05D007121 ORTHO05D009116 3.4e-50 202.6 167 65.3
Psat1g112760 Pisum sativum HOM05D007121 ORTHO05D009116 3.4e-50 202.6 171 63.7
Rhsim05G0000300 Rhododendron simsii HOM05D007121 ORTHO05D009116 4.4e-50 202.2 169 65.1
PSO017G0193 Papaver somniferum HOM05D007121 ORTHO05D009116 5.8e-50 201.8 171 62.6
VMungo0464G1683 Vigna mungo HOM05D007121 ORTHO05D009116 5.8e-50 201.8 175 62.9
FvH4_2g16920 Fragaria vesca HOM05D007121 ORTHO05D009116 7.5e-50 201.4 179 63.7
Prupe.3G000100 Prunus persica HOM05D007121 ORTHO05D009116 7.5e-50 201.4 170 64.7
RcHm_v2.0_Chr6g0281061 Rosa chinensis HOM05D007121 ORTHO05D009116 9.8e-50 201.1 170 65.3
FAN27G1381 Fragaria x ananassa HOM05D007121 ORTHO05D009116 1.7e-49 200.3 170 65.3
SGA_v2.0_scaffold158G37477 Striga asiatica HOM05D007121 ORTHO05D009116 1.7e-49 200.3 165 64.2
CiPaw.04G007900 Carya illinoinensis HOM05D007121 ORTHO05D009116 6.4e-49 198.4 171 63.2
Lalb_Chr03g0033281 Lupinus albus HOM05D007121 ORTHO05D009116 6.4e-49 198.4 169 61.5
TWI79G1709 Tripterygium wilfordii HOM05D007121 ORTHO05D009116 8.3e-49 198.0 168 60.7
Oeu023908.1 Olea europaea HOM05D007121 ORTHO05D009116 1.9e-48 196.8 168 64.9
PGR142G3205 Punica granatum HOM05D007121 ORTHO05D009116 1.9e-48 196.8 168 64.9
SHI18638 Sapria himalayana HOM05D007121 ORTHO05D009116 1.9e-48 196.8 168 61.9
Duzib116G0635 Durio zibethinus HOM05D007121 ORTHO05D009116 3.2e-48 196.1 171 63.2
Migut.D00783 Erythranthe guttata HOM05D007121 ORTHO05D009116 7.0e-48 194.9 169 61.5
MD17G1285500 Malus domestica HOM05D007121 ORTHO05D009116 7.0e-48 194.9 170 62.9
DCAR_014756 Daucus carota HOM05D007121 ORTHO05D009116 9.2e-48 194.5 168 62.5
EL10Ac9g21548 Beta vulgaris HOM05D007121 ORTHO05D009116 1.2e-47 194.1 167 62.3
Gohir.A08G228400 Gossypium hirsutum HOM05D007121 ORTHO05D009116 1.2e-47 194.1 165 64.2
ClCG08G001950 Citrullus lanatus HOM05D007121 ORTHO05D009116 1.6e-47 193.7 183 58.5
CDE04G1200 Ceratophyllum demersum HOM05D007121 ORTHO05D009116 1.5e-45 187.2 164 61.0
Ca_25244_v3 Cicer arietinum L. HOM05D005833 ORTHO05D008135 1.9e-45 186.8 153 65.4
THA.LOC104806483 Tarenaya hassleriana HOM05D007121 ORTHO05D009116 5.6e-45 185.3 168 57.7
QL09p001085 Quercus lobata HOM05D007121 ORTHO05D009116 9.5e-45 184.5 171 59.1
BraA09t38818Z Brassica rapa HOM05D007121 ORTHO05D009116 4.7e-44 182.2 167 57.5
A09p32830 Brassica napus HOM05D007121 ORTHO05D009116 6.2e-44 181.8 167 57.5
Thhalv10008542m.g Eutrema salsugineum HOM05D007121 ORTHO05D009116 6.2e-44 181.8 167 56.9
C06p12400 Brassica napus HOM05D007121 ORTHO05D009116 8.1e-44 181.4 164 57.9
BcaC08g43856 Brassica carinata HOM05D007121 ORTHO05D009116 1.1e-43 181.0 167 56.9
BolC6t36394H Brassica oleracea HOM05D007121 ORTHO05D009116 1.1e-43 181.0 167 56.9
BcaB07g32986 Brassica carinata HOM05D007121 ORTHO05D009116 1.8e-43 180.3 167 57.5
Peaxi162Scf00391g00430 Petunia axillaris HOM05D007121 ORTHO05D009116 2.3e-43 179.9 162 62.3
ECA247G1226 Erigeron canadensis HOM05D000912 ORTHO05D001232 5.2e-43 178.7 179 59.8
Aa31LG6G7900 Aethionema arabicum HOM05D007121 ORTHO05D009116 1.5e-42 177.2 167 58.1
AT1G33330 Arabidopsis thaliana HOM05D007121 ORTHO05D009116 2.6e-42 176.4 167 56.9
CARHR032780 Cardamine hirsuta HOM05D007121 ORTHO05D009116 2.6e-42 176.4 167 57.5
Atru.chr1.3623 Acer truncatum HOM05D007121 ORTHO05D009116 3.4e-42 176.0 162 61.7
AL1G47750 Arabidopsis lyrata HOM05D007121 ORTHO05D009116 3.4e-42 176.0 167 56.9
Carub.0001s3151 Capsella rubella HOM05D007121 ORTHO05D009116 3.4e-42 176.0 163 57.7
Sp1g28820 Schrenkiella parvula HOM05D007121 ORTHO05D009116 4.4e-42 175.6 167 56.3
Zm00001eb150220 Zea mays HOM05D007121 ORTHO05D009116 5.8e-42 175.3 96 95.8
Ah.01g010290 Amaranthus hybridus HOM05D007121 ORTHO05D009116 2.2e-41 173.3 140 64.3
Glyma.09G156302 Glycine max HOM05D007121 ORTHO05D009116 1.4e-40 170.6 151 63.6
HPP92_013452 Vanilla planifolia HOM05D007121 ORTHO05D009116 1.0e-38 164.5 138 60.9
Mapoly0024s0098 Marchantia polymorpha HOM05D007121 ORTHO05D009116 2.6e-34 149.8 168 48.8
SMO141G0210 Selaginella moellendorffii HOM05D007121 ORTHO05D009116 3.2e-32 142.9 164 48.8
Pp3c18_21640 Physcomitrium patens HOM05D007121 ORTHO05D009116 3.3e-29 132.9 173 46.8
HPP92_013454 Vanilla planifolia HOM05D007121 ORTHO05D009116 1.2e-28 131.0 111 58.6
AagrBONN_evm.TU.Sc2ySwM_228.1611 Anthoceros agrestis HOM05D007121 ORTHO05D009116 2.1e-28 130.2 155 50.3
Prupe.5G206900 Prunus persica HOM05D007121 ORTHO05D009116 2.0e-26 123.6 92 68.5
CBR_g50009 Chara braunii HOM05D007121 ORTHO05D009116 1.9e-21 107.1 168 39.3
Zm00001eb346490 Zea mays HOM05D007121 ORTHO05D009116 7.3e-21 105.1 127 52.0
Zm00001eb145380 Zea mays HOM05D007121 ORTHO05D009116 1.7e-17 94.0 48 91.7
PRCOL_00001818 Prasinoderma coloniale HOM05D007121 ORTHO05D009116 6.0e-15 85.5 162 32.7
Pp3c6_3690 Physcomitrium patens HOM05D007121 ORTHO05D009116 5.6e-13 79.0 101 41.6
Zm00001eb368650 Zea mays HOM05D001023 ORTHO05D000912 5.3e-11 72.4 112 49.1
Zm00001eb385330 Zea mays HOM05D049892 ORTHO05D443667 1.5e-10 70.9 112 48.2


User provided reference genes

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