Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb231330 Zea mays HOM05D003594 ORTHO05D004268 0.0e+00 1443.3 760 100.0
Os05g0295900 Oryza sativa ssp. japonica HOM05D003594 ORTHO05D004268 3.2e-243 845.5 772 62.8
TAR622G0410 Trochodendron aralioides HOM05D003594 ORTHO05D004268 1.3e-119 434.9 788 39.1
CiPaw.13G039500 Carya illinoinensis HOM05D003594 ORTHO05D004268 3.6e-114 416.8 793 39.3
HPP92_013069 Vanilla planifolia HOM05D003594 ORTHO05D004268 3.6e-114 416.8 797 37.8
Dinv11846 Davidia involucrata HOM05D003594 ORTHO05D004268 6.2e-114 416.0 781 38.2
QL04p046058 Quercus lobata HOM05D003594 ORTHO05D004268 5.3e-113 412.9 627 43.5
ECA238G3867 Erigeron canadensis HOM05D003594 ORTHO05D004268 2.6e-112 410.6 599 43.4
Cfa011279 Carpinus fangiana HOM05D003594 ORTHO05D004268 5.8e-112 409.5 792 39.0
TWI38G1480 Tripterygium wilfordii HOM05D003594 ORTHO05D004268 2.2e-111 407.5 796 38.7
Nn4g23115 Nelumbo nucifera HOM05D003594 ORTHO05D004268 1.1e-110 405.2 813 38.9
Aqoxy3G00687_Aqoxy3G00688 Aquilegia oxysepala HOM05D003594 ORTHO05D004268 1.9e-110 404.4 796 37.9
Cc02_g09740 Coffea canephora HOM05D003594 ORTHO05D004268 2.4e-110 404.1 813 37.1
DCAR_006339 Daucus carota HOM05D003594 ORTHO05D004268 4.2e-110 403.3 807 37.8
CSS0019720 Camellia sinensis var. sinensis HOM05D003594 ORTHO05D004268 5.4e-110 402.9 772 39.5
PSO478G3548 Papaver somniferum HOM05D003594 ORTHO05D004268 7.1e-110 402.5 787 37.6
Cpa.g.sc183.16 Carica papaya HOM05D003594 ORTHO05D004268 3.5e-109 400.2 657 40.6
Actinidia06697 Actinidia chinensis HOM05D003594 ORTHO05D004268 6.0e-109 399.4 778 39.2
CSS0031708 Camellia sinensis var. sinensis HOM05D003594 ORTHO05D004268 7.9e-109 399.1 769 39.5
RcHm_v2.0_Chr7g0211051 Rosa chinensis HOM05D003594 ORTHO05D004268 7.9e-109 399.1 614 43.2
Thecc.10G111800 Theobroma cacao HOM05D003594 ORTHO05D004268 5.1e-108 396.4 780 37.4
Duzib052G0830 Durio zibethinus HOM05D003594 ORTHO05D004268 6.7e-108 396.0 772 38.1
PSO017G2985 Papaver somniferum HOM05D003594 ORTHO05D004268 1.1e-107 395.2 776 36.7
Lj3C928G2 Lonicera japonica HOM05D003594 ORTHO05D004268 1.5e-107 394.8 765 38.0
HanXRQChr11g0342181 Helianthus annuus HOM05D003594 ORTHO05D004268 1.3e-106 391.7 684 39.5
COL.COLO4_28858 Corchorus olitorius HOM05D003594 ORTHO05D004268 2.1e-106 391.0 788 38.6
Cc02_g29780 Coffea canephora HOM05D003594 ORTHO05D004268 6.2e-106 389.4 790 36.5
ATR0737G134 Amborella trichopoda HOM05D003594 ORTHO05D004268 8.1e-106 389.0 625 41.0
Rhsim03G0098900 Rhododendron simsii HOM05D003594 ORTHO05D004268 8.1e-106 389.0 799 37.0
Prupe.3G003400 Prunus persica HOM05D003594 ORTHO05D004268 4.0e-105 386.7 791 37.9
Gohir.A06G169100 Gossypium hirsutum HOM05D003594 ORTHO05D004268 7.6e-104 382.5 775 38.1
Lsat_1_v5_gn_2_104580 Lactuca sativa HOM05D003594 ORTHO05D004268 1.3e-103 381.7 655 39.5
Solyc11g007010.2 Solanum lycopersicum HOM05D003594 ORTHO05D004268 1.3e-103 381.7 792 37.5
FAN18G3192 Fragaria x ananassa HOM05D003594 ORTHO05D004268 2.9e-103 380.6 672 39.1
Gorai.010G208000 Gossypium raimondii HOM05D003594 ORTHO05D004268 2.9e-103 380.6 772 36.5
FAN18G4146 Fragaria x ananassa HOM05D003594 ORTHO05D004268 6.4e-103 379.4 672 39.3
MBI02_g14487_MAGBIO Magnolia biondii HOM05D003594 ORTHO05D004268 1.4e-102 378.3 809 37.5
Potri.010G238000 Populus trichocarpa HOM05D003594 ORTHO05D004268 1.4e-102 378.3 779 37.1
Sopen11g002930 Solanum pennellii HOM05D003594 ORTHO05D004268 1.9e-102 377.9 792 37.4
Gohir.D06G176700 Gossypium hirsutum HOM05D003594 ORTHO05D004268 2.4e-102 377.5 779 37.2
AUR62042073 Chenopodium quinoa HOM05D003594 ORTHO05D004268 5.5e-102 376.3 614 40.9
CANSAT56G3624 Cannabis sativa HOM05D003594 ORTHO05D004268 7.1e-102 375.9 540 43.7
Eucgr.J00989 Eucalyptus grandis HOM05D003594 ORTHO05D004268 7.1e-102 375.9 776 37.0
FvH4_5g22640 Fragaria vesca HOM05D003594 ORTHO05D004268 7.1e-102 375.9 672 39.0
Sed0011677 Sechium edule HOM05D003594 ORTHO05D004268 1.2e-101 375.2 594 42.1
Sabra10G0186200 Salix brachista HOM05D003594 ORTHO05D004268 7.9e-101 372.5 775 36.8
Ciclev10027803m.g Citrus clementina HOM05D003594 ORTHO05D004268 1.0e-100 372.1 779 38.0
Lj1g0028024 Lotus japonicus HOM05D003594 ORTHO05D004268 1.0e-100 372.1 609 40.7
Peaxi162Scf00173g00417 Petunia axillaris HOM05D003594 ORTHO05D004268 2.3e-100 370.9 807 36.3
THA.LOC104820658 Tarenaya hassleriana HOM05D003594 ORTHO05D004268 3.9e-100 370.2 596 40.4
CAN.G645.3 Capsicum annuum HOM05D003594 ORTHO05D004268 6.7e-100 369.4 791 36.2
MD17G1284000 Malus domestica HOM05D003594 ORTHO05D004268 1.5e-99 368.2 802 36.7
Nitab4.5_0001437g0090 Nicotiana tabacum HOM05D003594 ORTHO05D004268 5.6e-99 366.3 806 36.5
Carub.0001s2847 Capsella rubella HOM05D003594 ORTHO05D004268 9.6e-99 365.5 555 42.2
FAN04G1757 Fragaria x ananassa HOM05D003594 ORTHO05D004268 9.6e-99 365.5 672 38.2
PGSC0003DMG400023977 Solanum tuberosum HOM05D003594 ORTHO05D004268 9.6e-99 365.5 795 36.5
Manes.11G108901 Manihot esculenta HOM05D003594 ORTHO05D004268 1.6e-98 364.8 781 37.0
ClCG09G007450 Citrullus lanatus HOM05D003594 ORTHO05D004268 1.8e-97 361.3 711 38.1
Sp1g26080 Schrenkiella parvula HOM05D003594 ORTHO05D004268 6.9e-97 359.4 548 40.9
A08p24610 Brassica napus HOM05D003594 ORTHO05D004268 1.2e-96 358.6 564 41.0
Sed0007749 Sechium edule HOM05D003594 ORTHO05D004268 1.2e-96 358.6 770 35.6
BolC3t19907H Brassica oleracea HOM05D003594 ORTHO05D004268 2.0e-96 357.8 549 41.9
Migut.F00912 Erythranthe guttata HOM05D003594 ORTHO05D004268 3.4e-96 357.1 593 40.1
Thhalv10006813m.g Eutrema salsugineum HOM05D003594 ORTHO05D004268 4.5e-96 356.7 559 41.9
BcaC01g00173 Brassica carinata HOM05D003594 ORTHO05D004268 5.8e-96 356.3 564 41.0
C03p76500 Brassica napus HOM05D003594 ORTHO05D004268 1.0e-95 355.5 564 40.8
Oeu025587.1 Olea europaea HOM05D003594 ORTHO05D004268 1.7e-95 354.8 833 34.6
VMungo0331G0994 Vigna mungo HOM05D003594 ORTHO05D004268 2.2e-95 354.4 793 36.2
Lalb_Chr10g0100231 Lupinus albus HOM05D003594 ORTHO05D004268 3.8e-95 353.6 778 35.7
Glyma.16G027600 Glycine max HOM05D003594 ORTHO05D004268 4.9e-95 353.2 795 34.5
SalBow6G4638 Salvia bowleyana HOM05D003594 ORTHO05D004268 4.9e-95 353.2 790 36.1
Lj3g0004598 Lotus japonicus HOM05D003594 ORTHO05D004268 8.4e-95 352.4 771 36.1
CARHR029630 Cardamine hirsuta HOM05D003594 ORTHO05D004268 2.5e-94 350.9 678 38.2
BcaB03g12203 Brassica carinata HOM05D003594 ORTHO05D004268 4.2e-94 350.1 549 41.2
BcaC05g27050 Brassica carinata HOM05D003594 ORTHO05D004268 2.1e-93 347.8 544 41.4
BolC5t31639H Brassica oleracea HOM05D003594 ORTHO05D004268 2.1e-93 347.8 544 41.4
A09p36300 Brassica napus HOM05D003594 ORTHO05D004268 2.7e-93 347.4 556 41.2
Phvul.010G110700 Phaseolus vulgaris HOM05D003594 ORTHO05D004268 2.7e-93 347.4 800 34.8
AUR62043305 Chenopodium quinoa HOM05D003594 ORTHO05D004268 6.0e-93 346.3 564 39.2
Medtr3g075460 Medicago truncatula HOM05D003594 ORTHO05D004268 6.0e-93 346.3 784 35.6
Glyma.07G058700 Glycine max HOM05D003594 ORTHO05D004268 7.9e-93 345.9 802 35.5
EL10Ac4g08659 Beta vulgaris HOM05D003594 ORTHO05D004268 1.3e-92 345.1 748 35.6
arahy.Tifrunner.gnm1.ann1.8EA83L Arachis hypogaea HOM05D003594 ORTHO05D004268 1.8e-92 344.7 799 35.7
C05p29080 Brassica napus HOM05D003594 ORTHO05D004268 1.8e-92 344.7 544 41.2
Medtr8g028030 Medicago truncatula HOM05D003594 ORTHO05D004268 1.8e-92 344.7 791 35.0
Nitab4.5_0005622g0060 Nicotiana tabacum HOM05D003594 ORTHO05D004268 1.8e-92 344.7 819 35.3
FAN08G1578 Fragaria x ananassa HOM05D003594 ORTHO05D004268 3.0e-92 344.0 672 37.4
BraA09t39154Z Brassica rapa HOM05D003594 ORTHO05D004268 8.7e-92 342.4 550 41.8
CDE09G0981 Ceratophyllum demersum HOM05D003594 ORTHO05D004268 5.7e-91 339.7 778 36.1
GSVIVG01032568001 Vitis vinifera HOM05D003594 ORTHO05D004268 5.7e-91 339.7 741 36.3
BcaB07g32622 Brassica carinata HOM05D003594 ORTHO05D004268 2.1e-90 337.8 550 40.9
Ah.04g162260 Amaranthus hybridus HOM05D003594 ORTHO05D004268 2.8e-90 337.4 777 35.4
AT1G30240 Arabidopsis thaliana HOM05D003594 ORTHO05D004268 2.8e-90 337.4 566 38.9
Ca_23589_v3 Cicer arietinum L. HOM05D003594 ORTHO05D004268 6.3e-90 336.3 800 34.6
AL1G44160 Arabidopsis lyrata HOM05D003594 ORTHO05D004268 1.2e-88 332.0 568 38.6
Dinv06533 Davidia involucrata HOM05D003594 ORTHO05D004268 1.3e-87 328.6 560 40.7
Aa31sc91G80 Aethionema arabicum HOM05D003594 ORTHO05D004268 6.5e-87 326.2 655 36.8
Psat4g159240 Pisum sativum HOM05D003594 ORTHO05D004268 9.3e-86 322.4 777 34.9
Sc06g0002330 Simmondsia chinensis HOM05D003594 ORTHO05D004268 2.1e-85 321.2 774 33.5
CsaV3_5G035440 Cucumis sativus L. HOM05D003594 ORTHO05D004268 2.3e-84 317.8 652 38.0
CsaV3_5G035480 Cucumis sativus L. HOM05D003594 ORTHO05D004268 2.3e-84 317.8 652 38.0
PGR044G2128 Punica granatum HOM05D003594 ORTHO05D004268 3.9e-84 317.0 781 33.2
ClCG05G018390 Citrullus lanatus HOM05D003594 ORTHO05D004268 1.5e-83 315.1 812 33.3
TPR.G8757 Trifolium pratense HOM05D003594 ORTHO05D004268 4.3e-83 313.5 522 41.0
Cc02_g29810 Coffea canephora HOM05D003594 ORTHO05D004268 3.1e-81 307.4 592 37.5
MELO3C012354.2 Cucumis melo HOM05D003594 ORTHO05D004268 9.1e-81 305.8 765 33.2
Hund23993 Selenicereus undatus HOM05D003594 ORTHO05D004268 8.5e-79 299.3 648 36.7
SGA_v2.0_scaffold295G47526 Striga asiatica HOM05D003594 ORTHO05D004268 8.5e-79 299.3 757 33.7
Mapoly0108s0040 Marchantia polymorpha HOM05D003594 ORTHO05D004268 5.5e-78 296.6 566 36.7
BraA08t34416Z Brassica rapa HOM05D003594 ORTHO05D004268 7.2e-78 296.2 498 39.8
Nn3g17199 Nelumbo nucifera HOM05D003594 ORTHO05D004268 9.4e-78 295.8 426 44.1
arahy.Tifrunner.gnm1.ann1.Q3AX4Y Arachis hypogaea HOM05D003594 ORTHO05D004268 1.6e-77 295.0 852 32.6
Hund22286 Selenicereus undatus HOM05D003594 ORTHO05D004268 4.6e-77 293.5 647 35.7
MD09G1289100 Malus domestica HOM05D003594 ORTHO05D004268 1.4e-76 292.0 640 36.1
Atru.chr12.1013 Acer truncatum HOM05D003594 ORTHO05D004268 1.1e-73 282.3 652 35.1
CsaV3_5G035460 Cucumis sativus L. HOM05D003594 ORTHO05D004268 1.4e-73 282.0 464 42.0
Phvul.003G001400 Phaseolus vulgaris HOM05D003594 ORTHO05D004268 9.1e-73 279.3 686 35.9
Pp3c8_9490 Physcomitrium patens HOM05D003594 ORTHO05D004268 1.7e-71 275.0 635 34.6
SMO364G0406 Selaginella moellendorffii HOM05D003594 ORTHO05D004268 8.5e-71 272.7 573 36.5
Pp3c15_8100 Physcomitrium patens HOM05D003594 ORTHO05D004268 1.4e-70 271.9 563 35.2
Pp3c15_8103 Physcomitrium patens HOM05D003594 ORTHO05D004268 1.4e-70 271.9 563 35.2
Cc02_g09730 Coffea canephora HOM05D003594 ORTHO05D004268 4.7e-69 266.9 322 47.2
Hma1.2p1_0145F.1_g065330 Hydrangea macrophylla HOM05D003594 ORTHO05D004268 3.9e-68 263.8 361 44.6
Gohir.D09G017550 Gossypium hirsutum HOM05D003594 ORTHO05D004268 4.0e-60 237.3 542 33.6
Gorai.006G020600 Gossypium raimondii HOM05D003594 ORTHO05D004268 6.7e-60 236.5 538 33.1
CBR_g29875 Chara braunii HOM05D003594 ORTHO05D000497 7.7e-56 223.0 626 32.3
Haze_02500 Corylus avellana HOM05D003594 ORTHO05D004268 1.2e-53 215.7 358 39.9
CBR_g45421 Chara braunii HOM05D003594 ORTHO05D004268 3.6e-53 214.2 617 31.9
Actinidia18596 Actinidia chinensis HOM05D003594 ORTHO05D004268 1.2e-51 209.1 314 43.0
GSVIVG01011385001 Vitis vinifera HOM05D003594 ORTHO05D004268 2.4e-49 201.4 489 32.3
Os06g0343900 Oryza sativa ssp. japonica HOM05D003594 ORTHO05D004268 5.0e-47 193.7 205 54.6
Gohir.A09G018100 Gossypium hirsutum HOM05D003594 ORTHO05D004268 1.6e-40 172.2 440 33.2
CsaV3_5G035510 Cucumis sativus L. HOM05D003594 ORTHO05D004268 3.5e-40 171.0 216 46.8
MD09G1292100 Malus domestica HOM05D003594 ORTHO05D004268 1.1e-38 166.0 521 32.1
SEGI_27789 Sequoiadendron giganteum HOM05D003594 ORTHO05D004268 1.1e-38 166.0 193 48.2
Aqoxy2G02949 Aquilegia oxysepala HOM05D003594 ORTHO05D004268 9.5e-38 162.9 553 31.5
AagrBONN_evm.TU.Sc2ySwM_228.2673 Anthoceros agrestis HOM05D003594 ORTHO05D004268 1.4e-33 149.1 358 33.0
Hund22291 Selenicereus undatus HOM05D003594 ORTHO05D004268 1.8e-28 132.1 195 46.2
MSTRG.27536 Avicennia marina HOM05D003594 ORTHO05D004268 2.2e-26 125.2 283 35.3
SEGI_05252 Sequoiadendron giganteum HOM05D003594 ORTHO05D004268 3.7e-26 124.4 179 44.7
Cc02_g29830 Coffea canephora HOM05D003594 ORTHO05D004268 4.9e-26 124.0 128 53.9
Nn3g17196 Nelumbo nucifera HOM05D003594 ORTHO05D004268 4.9e-26 124.0 185 42.7
ATR0564G271 Amborella trichopoda HOM05D003594 ORTHO05D004268 1.9e-25 122.1 324 34.6
Haze_02506 Corylus avellana HOM05D003594 ORTHO05D004268 3.3e-22 111.3 352 31.5
TWI63G1716 Tripterygium wilfordii HOM05D003594 ORTHO05D004268 7.3e-22 110.2 153 41.2
Psat6g218640 Pisum sativum HOM05D001312 ORTHO05D001832 1.3e-18 99.4 222 32.9
SHI24306 Sapria himalayana HOM05D003594 ORTHO05D004268 2.2e-18 98.6 212 33.0
QL04p046254 Quercus lobata HOM05D003594 ORTHO05D004268 1.1e-17 96.3 206 33.5
BcaB08g34816 Brassica carinata HOM05D002573 ORTHO05D002918 2.4e-17 95.1 146 39.0
Actinidia36695 Actinidia chinensis HOM05D003594 ORTHO05D004268 1.5e-14 85.9 73 60.3
Atru.chr12.1014 Acer truncatum HOM05D003594 ORTHO05D004268 1.9e-14 85.5 100 45.0
CsaV3_5G035520 Cucumis sativus L. HOM05D003594 ORTHO05D004268 2.0e-11 75.5 209 34.4
Hma1.2p1_0053F.1_g030920 Hydrangea macrophylla HOM05D003594 ORTHO05D004268 9.9e-11 73.2 74 50.0
CDE02G4417 Ceratophyllum demersum HOM05D003594 ORTHO05D004268 2.2e-10 72.0 71 54.9
Psat6g091000 Pisum sativum HOM05D003335 ORTHO05D003853 4.9e-10 70.9 90 46.7
Psat6g226760 Pisum sativum HOM05D003335 ORTHO05D003853 8.4e-10 70.1 90 45.6
SHI24307 Sapria himalayana HOM05D003594 ORTHO05D004268 2.4e-09 68.6 107 43.9


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