Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb230550 Zea mays HOM05D006581 ORTHO05D007870 0.0e+00 1542.3 811 100.0
Os02g0123400 Oryza sativa ssp. japonica HOM05D006581 ORTHO05D007870 9.7e-198 694.5 545 69.0
MBI12_g26094_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 8.9e-151 538.5 779 42.4
TAR629G0084 Trochodendron aralioides HOM05D006581 ORTHO05D007870 1.8e-148 530.8 812 41.4
Cfa012052 Carpinus fangiana HOM05D006581 ORTHO05D007870 3.1e-148 530.0 765 41.6
Duzib128G1875 Durio zibethinus HOM05D006581 ORTHO05D007870 2.5e-145 520.4 812 40.8
Rhsim07G0097400 Rhododendron simsii HOM05D006581 ORTHO05D007870 7.3e-145 518.8 661 44.6
Thecc.10G119000 Theobroma cacao HOM05D006581 ORTHO05D007870 7.3e-145 518.8 799 41.1
Nn3g19980 Nelumbo nucifera HOM05D006581 ORTHO05D007870 8.0e-144 515.4 784 40.9
Haze_09013 Corylus avellana HOM05D006581 ORTHO05D007870 1.8e-143 514.2 799 40.7
Actinidia27421 Actinidia chinensis HOM05D006581 ORTHO05D007870 2.3e-143 513.8 814 40.3
Gohir.D06G178000 Gossypium hirsutum HOM05D006581 ORTHO05D007870 1.2e-142 511.5 803 40.3
Gorai.N007200 Gossypium raimondii HOM05D006581 ORTHO05D007870 2.6e-142 510.4 803 40.2
Aqoxy7G00548 Aquilegia oxysepala HOM05D006581 ORTHO05D007870 9.8e-142 508.4 662 42.4
Gohir.A06G170200 Gossypium hirsutum HOM05D006581 ORTHO05D007870 1.3e-141 508.1 796 40.5
Ciclev10014277m.g Citrus clementina HOM05D006581 ORTHO05D007870 2.9e-141 506.9 809 39.7
GSVIVG01019912001 Vitis vinifera HOM05D006581 ORTHO05D007870 8.3e-141 505.4 815 41.0
Atru.chr12.1085 Acer truncatum HOM05D006581 ORTHO05D007870 2.4e-140 503.8 801 40.6
CiPaw.08G049100 Carya illinoinensis HOM05D006581 ORTHO05D007870 5.4e-140 502.7 655 44.4
Lj8A253T47 Lonicera japonica HOM05D006581 ORTHO05D007870 1.2e-139 501.5 607 43.5
PSO478G1557 Papaver somniferum HOM05D006581 ORTHO05D007870 1.3e-138 498.0 808 40.0
PSO782G3179 Papaver somniferum HOM05D006581 ORTHO05D007870 2.3e-138 497.3 808 40.0
Peaxi162Scf00620g00237 Petunia axillaris HOM05D006581 ORTHO05D007870 8.6e-138 495.4 640 43.8
Potri.008G016000 Populus trichocarpa HOM05D006581 ORTHO05D007870 7.3e-137 492.3 788 40.7
Nitab4.5_0010186g0020 Nicotiana tabacum HOM05D006581 ORTHO05D007870 9.5e-137 491.9 811 39.1
Prupe.1G071100 Prunus persica HOM05D006581 ORTHO05D007870 9.5e-137 491.9 776 39.6
Sed0002136 Sechium edule HOM05D006581 ORTHO05D007870 1.6e-136 491.1 616 44.5
Sabra08G0009700 Salix brachista HOM05D006581 ORTHO05D007870 2.1e-136 490.7 788 40.2
SGA_v2.0_scaffold196G40922 Striga asiatica HOM05D006581 ORTHO05D007870 2.1e-136 490.7 791 39.1
FvH4_4g06790 Fragaria vesca HOM05D006581 ORTHO05D007870 4.7e-136 489.6 790 39.7
Hma1.2p1_0017F.1_g011220 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 4.7e-136 489.6 805 39.4
Solyc08g079810.4 Solanum lycopersicum HOM05D006581 ORTHO05D007870 4.7e-136 489.6 638 43.3
Lj3g0012962 Lotus japonicus HOM05D006581 ORTHO05D007870 1.1e-135 488.4 658 42.6
QL12p015968 Quercus lobata HOM05D006581 ORTHO05D007870 1.4e-135 488.0 814 40.0
MD15G1394600 Malus domestica HOM05D006581 ORTHO05D007870 5.2e-135 486.1 802 39.3
CANSAT78G1168 Cannabis sativa HOM05D006581 ORTHO05D007870 6.8e-135 485.7 781 38.9
FAN12G3574 Fragaria x ananassa HOM05D006581 ORTHO05D007870 6.8e-135 485.7 790 39.5
Oeu001905.1 Olea europaea HOM05D006581 ORTHO05D007870 1.2e-134 485.0 787 39.1
RcHm_v2.0_Chr4g0398711 Rosa chinensis HOM05D006581 ORTHO05D007870 1.2e-134 485.0 801 39.2
PGSC0003DMG400003942 Solanum tuberosum HOM05D006581 ORTHO05D007870 1.5e-134 484.6 788 38.8
Sopen08g028170 Solanum pennellii HOM05D006581 ORTHO05D007870 5.8e-134 482.6 809 38.1
DCAR_000885 Daucus carota HOM05D006581 ORTHO05D007870 1.3e-133 481.5 764 38.5
Hund14684 Selenicereus undatus HOM05D006581 ORTHO05D007870 3.7e-133 479.9 625 43.4
EL10Ac5g12666 Beta vulgaris HOM05D006581 ORTHO05D007870 4.9e-133 479.6 632 43.5
TWI38G0425 Tripterygium wilfordii HOM05D006581 ORTHO05D007870 6.4e-133 479.2 794 38.0
arahy.Tifrunner.gnm1.ann1.MU0C19 Arachis hypogaea HOM05D006581 ORTHO05D007870 8.3e-133 478.8 640 42.7
ClCG00G000120 Citrullus lanatus HOM05D006581 ORTHO05D007870 1.4e-132 478.0 657 41.7
ClCG00G004880 Citrullus lanatus HOM05D006581 ORTHO05D007870 1.4e-132 478.0 657 41.7
ClCG10G003370 Citrullus lanatus HOM05D006581 ORTHO05D007870 1.4e-132 478.0 657 41.7
Ah.02g116280 Amaranthus hybridus HOM05D006581 ORTHO05D007870 2.4e-132 477.2 654 43.7
arahy.Tifrunner.gnm1.ann1.J373DC Arachis hypogaea HOM05D006581 ORTHO05D007870 2.4e-132 477.2 640 42.8
Medtr3g010350 Medicago truncatula HOM05D006581 ORTHO05D007870 9.2e-132 475.3 639 42.3
Phvul.005G003000 Phaseolus vulgaris HOM05D006581 ORTHO05D007870 2.1e-131 474.2 815 39.0
Cpa.g.sc33.130 Carica papaya HOM05D006581 ORTHO05D007870 3.5e-131 473.4 759 39.9
Glyma.06G323200 Glycine max HOM05D006581 ORTHO05D007870 7.8e-131 472.2 815 38.2
Psat7g256920 Pisum sativum HOM05D006581 ORTHO05D007870 7.8e-131 472.2 630 42.2
CsaV3_3G003400 Cucumis sativus L. HOM05D006581 ORTHO05D007870 6.6e-130 469.2 621 42.8
Nitab4.5_0005167g0030 Nicotiana tabacum HOM05D006581 ORTHO05D007870 6.6e-130 469.2 795 38.7
Cc03_g06340 Coffea canephora HOM05D006581 ORTHO05D007870 1.9e-129 467.6 615 42.4
TPR.G5149 Trifolium pratense HOM05D006581 ORTHO05D007870 5.6e-129 466.1 648 41.8
MELO3C014006.2 Cucumis melo HOM05D006581 ORTHO05D007870 7.3e-129 465.7 644 42.7
THA.LOC104812128 Tarenaya hassleriana HOM05D006581 ORTHO05D007870 7.3e-129 465.7 797 38.1
VMungo1080G1314 Vigna mungo HOM05D006581 ORTHO05D007870 7.3e-129 465.7 789 38.1
ECA233G4444 Erigeron canadensis HOM05D006581 ORTHO05D007870 1.2e-128 464.9 659 42.2
Lsat_1_v5_gn_8_138880 Lactuca sativa HOM05D006581 ORTHO05D007870 4.7e-128 463.0 638 41.5
Ca_14132_v3 Cicer arietinum L. HOM05D006581 ORTHO05D007870 1.4e-127 461.5 785 37.5
HanXRQChr04g0124681 Helianthus annuus HOM05D006581 ORTHO05D007870 2.3e-127 460.7 646 41.3
Migut.E01071 Erythranthe guttata HOM05D006581 ORTHO05D007870 5.8e-126 456.1 800 37.2
C06p48090 Brassica napus HOM05D003462 ORTHO05D007870 2.9e-125 453.8 777 38.5
BolC6t39844H Brassica oleracea HOM05D006581 ORTHO05D007870 3.7e-125 453.4 762 39.5
Manes.10G064500 Manihot esculenta HOM05D006581 ORTHO05D007870 6.4e-125 452.6 769 38.1
Lalb_Chr01g0006991 Lupinus albus HOM05D006581 ORTHO05D007870 2.4e-124 450.7 800 36.9
BraA07t31529Z Brassica rapa HOM05D006581 ORTHO05D007870 7.1e-124 449.1 760 38.9
A07p39830 Brassica napus HOM05D006581 ORTHO05D007870 1.0e-122 445.3 774 38.5
AL2G33810 Arabidopsis lyrata HOM05D006581 ORTHO05D007870 3.9e-122 443.4 762 39.1
Thhalv10018136m.g Eutrema salsugineum HOM05D006581 ORTHO05D007870 6.6e-122 442.6 802 37.9
Aa31LG4G4270 Aethionema arabicum HOM05D006581 ORTHO05D007870 1.9e-121 441.0 796 37.8
AT1G73970 Arabidopsis thaliana HOM05D006581 ORTHO05D007870 2.8e-120 437.2 768 38.4
BcaC08g46826 Brassica carinata HOM05D006581 ORTHO05D007870 3.6e-120 436.8 780 38.1
Sp5g29170 Schrenkiella parvula HOM05D006581 ORTHO05D007870 3.1e-119 433.7 774 37.7
Carub.0002s2075 Capsella rubella HOM05D006581 ORTHO05D007870 4.4e-118 429.9 780 37.7
COL.COLO4_10009 Corchorus olitorius HOM05D006581 ORTHO05D007870 4.9e-117 426.4 796 37.6
unitig_26.g9687 Utricularia gibba HOM05D006581 ORTHO05D007870 4.9e-117 426.4 632 38.6
CARHR067090 Cardamine hirsuta HOM05D006581 ORTHO05D007870 6.4e-117 426.0 778 37.7
AUR62004835 Chenopodium quinoa HOM05D006581 ORTHO05D007870 1.6e-115 421.4 564 43.6
AUR62040923 Chenopodium quinoa HOM05D006581 ORTHO05D007870 7.8e-115 419.1 566 43.5
vmacro14025 Vaccinium macrocarpon HOM05D006581 ORTHO05D007870 3.3e-113 413.7 424 50.5
CDE05G1723 Ceratophyllum demersum HOM05D006581 ORTHO05D007870 1.2e-110 405.2 603 39.5
ATR0757G052 Amborella trichopoda HOM05D006581 ORTHO05D007870 2.6e-110 404.1 794 35.5
SHI19174 Sapria himalayana HOM05D006581 ORTHO05D007870 2.9e-109 400.6 643 37.8
Lj8C252T14 Lonicera japonica HOM05D006581 ORTHO05D007870 1.3e-106 391.7 606 38.0
FAN07G0243 Fragaria x ananassa HOM05D006581 ORTHO05D007870 2.3e-106 391.0 791 36.2
MBI12_g05899_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 1.5e-105 388.3 720 38.5
SalBow7G1099 Salvia bowleyana HOM05D006581 ORTHO05D007870 3.3e-105 387.1 613 40.1
Ciclev10017584m.g Citrus clementina HOM05D006581 ORTHO05D007870 5.3e-87 326.6 356 51.1
Dinv39047 Davidia involucrata HOM05D006581 ORTHO05D007870 2.2e-85 321.2 479 39.5
Medtr4g059740 Medicago truncatula HOM05D006581 ORTHO05D007870 1.8e-79 301.6 517 37.5
Ciclev10006485m.g Citrus clementina HOM05D006581 ORTHO05D007870 1.4e-74 285.4 312 49.7
Hma1.2p1_0138F.1_g062900 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 5.3e-71 273.5 521 35.1
Mapoly0035s0119 Marchantia polymorpha HOM05D006581 ORTHO05D007870 1.2e-70 272.3 551 33.9
FAN17G3070 Fragaria x ananassa HOM05D006581 ORTHO05D007870 3.8e-69 267.3 580 34.8
Dinv37725 Davidia involucrata HOM05D006581 ORTHO05D007870 3.2e-68 264.2 581 32.7
Sc01g0009010 Simmondsia chinensis HOM05D006581 ORTHO05D007870 1.4e-66 258.8 438 37.2
Pp3c5_4510 Physcomitrium patens HOM05D006581 ORTHO05D007870 5.1e-66 256.9 506 34.0
Migut.J01229 Erythranthe guttata HOM05D006581 ORTHO05D007870 4.5e-62 243.8 264 49.2
CSS0026570 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 1.1e-60 239.2 225 56.0
Ciclev10006576m.g Citrus clementina HOM05D006581 ORTHO05D007870 1.0e-58 232.6 283 45.2
Eucgr.E00518 Eucalyptus grandis HOM05D006581 ORTHO05D007870 2.6e-57 228.0 186 59.7
SMO118G0399 Selaginella moellendorffii HOM05D006581 ORTHO05D007870 1.6e-54 218.8 476 31.5
SEGI_20261 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 5.0e-53 213.8 251 47.4
AagrBONN_evm.TU.Sc2ySwM_228.3501 Anthoceros agrestis HOM05D006581 ORTHO05D007870 5.5e-52 210.3 551 29.9
Hma1.2p1_0017F.1_g011230 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 6.1e-51 206.8 520 31.7
Eucgr.E00519 Eucalyptus grandis HOM05D006581 ORTHO05D007870 6.8e-50 203.4 526 30.6
CSS0016486 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 6.3e-40 170.2 472 30.5
CSS0037330 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 1.6e-30 139.0 225 39.1
SEGI_01852 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 1.4e-26 125.9 570 26.8
CBR_g52136 Chara braunii HOM05D006581 ORTHO05D007870 2.4e-15 88.6 450 23.3
Lj8P252T34 Lonicera japonica HOM05D006581 ORTHO05D007870 4.1e-15 87.8 71 57.7
CSS0046982 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 4.7e-11 74.3 207 28.0
Zm00001eb186270 Zea mays HOM05D006581 ORTHO05D007870 1.8e-10 72.4 54 72.2


User provided reference genes

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