Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb228970 Zea mays HOM05D003493 ORTHO05D003980 0.0e+00 1459.1 763 100.0
Zm00001eb190790 Zea mays HOM05D003493 ORTHO05D003980 1.1e-200 704.1 809 51.5
Aqoxy3G04358 Aquilegia oxysepala HOM05D003493 ORTHO05D003980 4.1e-150 536.2 789 43.6
TAR622G0755 Trochodendron aralioides HOM05D003493 ORTHO05D003980 9.2e-150 535.0 800 42.8
CANSAT80G2441 Cannabis sativa HOM05D003493 ORTHO05D003980 4.7e-146 522.7 780 42.1
PSO063G3260 Papaver somniferum HOM05D003493 ORTHO05D003980 1.5e-139 501.1 786 40.6
PSO782G2561 Papaver somniferum HOM05D003493 ORTHO05D003980 1.9e-139 500.7 786 40.5
Manes.02G118200 Manihot esculenta HOM05D003493 ORTHO05D003980 4.3e-139 499.6 799 40.6
MBI06_g37980_MAGBIO Magnolia biondii HOM05D003493 ORTHO05D003980 2.1e-138 497.3 785 39.0
Os02g0827500 Oryza sativa ssp. japonica HOM05D003493 ORTHO05D003980 1.4e-137 494.6 606 48.5
Potri.017G155000 Populus trichocarpa HOM05D003493 ORTHO05D003980 5.2e-137 492.7 783 39.8
CSS0005530 Camellia sinensis var. sinensis HOM05D003493 ORTHO05D003980 4.4e-136 489.6 791 39.3
Sabra17G0126700 Salix brachista HOM05D003493 ORTHO05D003980 5.8e-136 489.2 803 40.1
Thecc.06G006900 Theobroma cacao HOM05D003493 ORTHO05D003980 5.8e-136 489.2 766 40.2
Actinidia06838 Actinidia chinensis HOM05D003493 ORTHO05D003980 1.3e-135 488.0 796 39.9
Duzib235G1490 Durio zibethinus HOM05D003493 ORTHO05D003980 2.2e-135 487.3 765 39.9
Hma1.2p1_0807F.1_g221460 Hydrangea macrophylla HOM05D003493 ORTHO05D003980 2.9e-135 486.9 825 39.5
CiPaw.16G076700 Carya illinoinensis HOM05D003493 ORTHO05D003980 1.1e-134 485.0 781 40.8
GSVIVG01024229001 Vitis vinifera HOM05D003493 ORTHO05D003980 4.2e-134 483.0 750 39.7
TWI81G0199 Tripterygium wilfordii HOM05D003493 ORTHO05D003980 1.2e-133 481.5 780 40.6
Duzib192G0928 Durio zibethinus HOM05D003493 ORTHO05D003980 1.6e-133 481.1 766 40.3
ATR0124G004 Amborella trichopoda HOM05D003493 ORTHO05D003980 1.3e-132 478.0 791 39.1
Gorai.009G116400 Gossypium raimondii HOM05D003493 ORTHO05D003980 3.0e-132 476.9 765 40.0
Atru.chr9.57 Acer truncatum HOM05D003493 ORTHO05D003980 8.7e-132 475.3 775 40.0
Gohir.D05G112200 Gossypium hirsutum HOM05D003493 ORTHO05D003980 1.5e-131 474.6 765 39.9
FAN04G2252 Fragaria x ananassa HOM05D003493 ORTHO05D003980 3.3e-131 473.4 784 39.4
FvH4_5g18670 Fragaria vesca HOM05D003493 ORTHO05D003980 7.3e-131 472.2 788 39.5
Prupe.5G246400 Prunus persica HOM05D003493 ORTHO05D003980 7.3e-131 472.2 799 39.7
Gohir.A05G111700 Gossypium hirsutum HOM05D003493 ORTHO05D003980 2.1e-130 470.7 765 39.5
Sp5g28170 Schrenkiella parvula HOM05D003493 ORTHO05D003980 2.1e-130 470.7 782 38.1
Sc12g0007780 Simmondsia chinensis HOM05D003493 ORTHO05D003980 2.8e-130 470.3 791 41.0
Lalb_Chr14g0370061 Lupinus albus HOM05D003493 ORTHO05D003980 3.6e-130 469.9 826 38.3
Glyma.10G174700 Glycine max HOM05D003493 ORTHO05D003980 4.8e-130 469.5 789 39.7
THA.LOC104812198 Tarenaya hassleriana HOM05D003493 ORTHO05D003980 6.2e-130 469.2 777 39.0
Manes.01G159600 Manihot esculenta HOM05D003493 ORTHO05D003980 8.1e-130 468.8 785 39.2
FAN18G2761 Fragaria x ananassa HOM05D003493 ORTHO05D003980 2.4e-129 467.2 788 39.8
Lalb_Chr06g0168711 Lupinus albus HOM05D003493 ORTHO05D003980 4.0e-129 466.5 817 37.6
arahy.Tifrunner.gnm1.ann1.ZVJ3VC Arachis hypogaea HOM05D003493 ORTHO05D003980 2.0e-128 464.2 789 40.4
Haze_18391 Corylus avellana HOM05D003493 ORTHO05D003980 4.4e-128 463.0 813 38.7
RcHm_v2.0_Chr7g0176841 Rosa chinensis HOM05D003493 ORTHO05D003980 7.6e-128 462.2 791 38.7
FAN08G2984 Fragaria x ananassa HOM05D003493 ORTHO05D003980 9.9e-128 461.8 781 39.4
Peaxi162Scf00643g00431 Petunia axillaris HOM05D003493 ORTHO05D003980 1.3e-127 461.5 627 44.0
BolC6t39773H Brassica oleracea HOM05D003493 ORTHO05D003980 2.2e-127 460.7 763 39.1
C06p47340 Brassica napus HOM05D003493 ORTHO05D003980 2.9e-127 460.3 758 38.8
Lj9A410T67 Lonicera japonica HOM05D003493 ORTHO05D003980 8.4e-127 458.8 802 37.8
TWI36G1567 Tripterygium wilfordii HOM05D003493 ORTHO05D003980 1.1e-126 458.4 778 39.1
Cfa017818 Carpinus fangiana HOM05D003493 ORTHO05D003980 2.4e-126 457.2 809 38.3
PGR083G2526 Punica granatum HOM05D003493 ORTHO05D003980 5.4e-126 456.1 806 38.2
ClCG01G014650 Citrullus lanatus HOM05D003493 ORTHO05D003980 7.1e-126 455.7 787 38.4
Lj5g0000329 Lotus japonicus HOM05D003493 ORTHO05D003980 7.1e-126 455.7 810 37.9
Lj5A169T97 Lonicera japonica HOM05D003493 ORTHO05D003980 9.3e-126 455.3 709 43.2
Nitab4.5_0000854g0120 Nicotiana tabacum HOM05D003493 ORTHO05D003980 1.2e-125 454.9 659 41.4
AL2G32970 Arabidopsis lyrata HOM05D003493 ORTHO05D003980 1.6e-125 454.5 777 37.2
Glyma.09G160200 Glycine max HOM05D003493 ORTHO05D003980 2.1e-125 454.1 801 37.8
Sopen06g028400 Solanum pennellii HOM05D003493 ORTHO05D003980 3.5e-125 453.4 695 41.9
Solyc06g072110.4 Solanum lycopersicum HOM05D003493 ORTHO05D003980 4.6e-125 453.0 698 41.8
BraA07t31464Z Brassica rapa HOM05D003493 ORTHO05D003980 6.0e-125 452.6 762 38.7
Phvul.004G135600 Phaseolus vulgaris HOM05D003493 ORTHO05D003980 7.9e-125 452.2 732 38.8
SalBow5G1620 Salvia bowleyana HOM05D003493 ORTHO05D003980 7.9e-125 452.2 806 38.5
Sopen03g029860 Solanum pennellii HOM05D003493 ORTHO05D003980 7.9e-125 452.2 796 38.4
Thhalv10006829m.g Eutrema salsugineum HOM05D003493 ORTHO05D003980 1.0e-124 451.8 790 37.3
VMungo0720G0805 Vigna mungo HOM05D003493 ORTHO05D003980 1.0e-124 451.8 786 38.8
Sp1g15900 Schrenkiella parvula HOM05D003493 ORTHO05D003980 1.3e-124 451.4 795 36.6
CsaV3_1G007680 Cucumis sativus L. HOM05D003493 ORTHO05D003980 2.3e-124 450.7 781 37.8
TPR.G8860 Trifolium pratense HOM05D003493 ORTHO05D003980 2.3e-124 450.7 826 35.8
AL1G30180 Arabidopsis lyrata HOM05D003493 ORTHO05D003980 3.0e-124 450.3 788 37.1
Eucgr.H00671 Eucalyptus grandis HOM05D003493 ORTHO05D003980 6.6e-124 449.1 798 37.5
VMungo0464G0665 Vigna mungo HOM05D003493 ORTHO05D003980 1.5e-123 448.0 732 38.8
Carub.0001s1755 Capsella rubella HOM05D003493 ORTHO05D003980 1.9e-123 447.6 789 38.1
CAN.G65.58 Capsicum annuum HOM05D003493 ORTHO05D003980 1.9e-123 447.6 836 38.3
Lalb_Chr21g0311711 Lupinus albus HOM05D003493 ORTHO05D003980 1.9e-123 447.6 722 39.3
A06p13880 Brassica napus HOM05D003493 ORTHO05D003980 3.3e-123 446.8 773 37.5
A07p39150 Brassica napus HOM05D003493 ORTHO05D003980 3.3e-123 446.8 759 38.3
MELO3C002186.2 Cucumis melo HOM05D003493 ORTHO05D003980 3.3e-123 446.8 787 37.4
Dinv11742 Davidia involucrata HOM05D003493 ORTHO05D003980 3.3e-123 446.8 816 38.4
BraA06t24529Z Brassica rapa HOM05D003493 ORTHO05D003980 9.6e-123 445.3 777 37.3
Glyma.16G209600 Glycine max HOM05D003493 ORTHO05D003980 9.6e-123 445.3 816 37.1
Lj2g0009881 Lotus japonicus HOM05D003493 ORTHO05D003980 9.6e-123 445.3 737 38.8
Nitab4.5_0000477g0020 Nicotiana tabacum HOM05D003493 ORTHO05D003980 2.8e-122 443.7 683 41.3
HanXRQChr15g0492171 Helianthus annuus HOM05D003493 ORTHO05D003980 3.6e-122 443.4 608 44.1
MD14G1000100 Malus domestica HOM05D003493 ORTHO05D003980 3.6e-122 443.4 797 38.8
CARHR018430 Cardamine hirsuta HOM05D003493 ORTHO05D003980 6.2e-122 442.6 797 37.9
Thhalv10018153m.g Eutrema salsugineum HOM05D003493 ORTHO05D003980 8.1e-122 442.2 791 36.3
Medtr6g066300 Medicago truncatula HOM05D003493 ORTHO05D003980 8.1e-122 442.2 665 40.2
Solyc03g019770.4 Solanum lycopersicum HOM05D003493 ORTHO05D003980 8.1e-122 442.2 737 39.3
Nn3g18516 Nelumbo nucifera HOM05D003493 ORTHO05D003980 1.4e-121 441.4 664 42.2
AT1G73200 Arabidopsis thaliana HOM05D003493 ORTHO05D003980 2.4e-121 440.7 776 35.2
Sed0011518 Sechium edule HOM05D003493 ORTHO05D003980 2.4e-121 440.7 784 36.6
Psat6g054360 Pisum sativum HOM05D003493 ORTHO05D003980 4.0e-121 439.9 794 36.9
AT1G17820 Arabidopsis thaliana HOM05D003493 ORTHO05D003980 5.3e-121 439.5 795 36.2
C02p30730 Brassica napus HOM05D003493 ORTHO05D003980 5.3e-121 439.5 764 36.6
C05p16200 Brassica napus HOM05D003493 ORTHO05D003980 5.3e-121 439.5 759 38.3
Gohir.A06G181400 Gossypium hirsutum HOM05D003493 ORTHO05D003980 5.3e-121 439.5 772 36.5
Medtr1g077470 Medicago truncatula HOM05D003493 ORTHO05D003980 9.0e-121 438.7 793 37.3
Aa31LG4G3480 Aethionema arabicum HOM05D003493 ORTHO05D003980 1.2e-120 438.3 713 37.3
BcaC07g41354 Brassica carinata HOM05D003493 ORTHO05D003980 1.2e-120 438.3 806 36.1
Migut.O00291 Erythranthe guttata HOM05D003493 ORTHO05D003980 1.5e-120 438.0 801 38.7
C08p43630 Brassica napus HOM05D003493 ORTHO05D003980 2.0e-120 437.6 803 35.9
BolC8t51909H Brassica oleracea HOM05D003493 ORTHO05D003980 2.6e-120 437.2 802 35.9
BraA02t06893Z Brassica rapa HOM05D003493 ORTHO05D003980 3.4e-120 436.8 643 39.2
BolC5t30322H Brassica oleracea HOM05D003493 ORTHO05D003980 4.5e-120 436.4 775 36.9
CARHR066210 Cardamine hirsuta HOM05D003493 ORTHO05D003980 4.5e-120 436.4 777 36.9
Carub.0002s1999 Capsella rubella HOM05D003493 ORTHO05D003980 5.8e-120 436.0 779 37.0
A02p18540 Brassica napus HOM05D003493 ORTHO05D003980 1.7e-119 434.5 652 38.8
TPR.G8876 Trifolium pratense HOM05D003493 ORTHO05D003980 3.8e-119 433.3 783 37.4
BraA09t41388Z Brassica rapa HOM05D003493 ORTHO05D003980 4.9e-119 433.0 802 35.8
Lsat_1_v5_gn_0_10721 Lactuca sativa HOM05D003493 ORTHO05D003980 6.4e-119 432.6 629 42.9
Nitab4.5_0004170g0020 Nicotiana tabacum HOM05D003493 ORTHO05D003980 8.4e-119 432.2 751 39.3
Aa31LG7G2640 Aethionema arabicum HOM05D003493 ORTHO05D003980 1.4e-118 431.4 744 37.8
A09p60190 Brassica napus HOM05D003493 ORTHO05D003980 1.4e-118 431.4 789 36.2
PGSC0003DMG400015207 Solanum tuberosum HOM05D003493 ORTHO05D003980 2.4e-118 430.6 686 41.0
BolC2t09128H Brassica oleracea HOM05D003493 ORTHO05D003980 4.2e-118 429.9 764 36.3
Gohir.D06G188200 Gossypium hirsutum HOM05D003493 ORTHO05D003980 5.5e-118 429.5 779 36.2
Gorai.010G220600 Gossypium raimondii HOM05D003493 ORTHO05D003980 5.5e-118 429.5 779 36.2
ECA232G4824 Erigeron canadensis HOM05D003493 ORTHO05D003980 6.0e-117 426.0 679 40.6
MSTRG.23219 Avicennia marina HOM05D003493 ORTHO05D003980 1.5e-115 421.4 796 38.2
Cc04_g13620 Coffea canephora HOM05D003493 ORTHO05D003980 9.6e-115 418.7 667 40.6
SGA_v2.0_scaffold25G10715 Striga asiatica HOM05D003493 ORTHO05D003980 9.6e-115 418.7 859 35.4
Peaxi162Scf01390g00035 Petunia axillaris HOM05D003493 ORTHO05D003980 4.8e-114 416.4 684 38.9
Ca_09923_v3 Cicer arietinum L. HOM05D003493 ORTHO05D003980 6.2e-114 416.0 543 44.6
HanXRQChr08g0220881 Helianthus annuus HOM05D003493 ORTHO05D003980 6.2e-114 416.0 619 41.4
BcaB07g34006 Brassica carinata HOM05D003493 ORTHO05D003980 1.8e-113 414.5 711 37.8
Psat1g117720 Pisum sativum HOM05D003493 ORTHO05D003980 1.8e-113 414.5 774 35.9
arahy.Tifrunner.gnm1.ann1.W71D15 Arachis hypogaea HOM05D003493 ORTHO05D003980 5.3e-113 412.9 828 36.7
CAN.G861.8 Capsicum annuum HOM05D003493 ORTHO05D003980 5.3e-113 412.9 807 36.2
QL10p036794 Quercus lobata HOM05D003493 ORTHO05D003980 4.2e-110 403.3 598 42.6
CDE04G1302 Ceratophyllum demersum HOM05D003493 ORTHO05D003980 7.1e-110 402.5 623 39.2
QL10p035454 Quercus lobata HOM05D003493 ORTHO05D003980 6.0e-109 399.4 598 42.3
EL10Ac8g19467 Beta vulgaris HOM05D003493 ORTHO05D003980 3.9e-108 396.7 803 35.6
Phvul.L006701 Phaseolus vulgaris HOM05D003493 ORTHO05D003980 6.7e-108 396.0 571 42.2
arahy.Tifrunner.gnm1.ann1.W0PAIX Arachis hypogaea HOM05D003493 ORTHO05D003980 8.7e-108 395.6 819 35.7
CDE07G1702 Ceratophyllum demersum HOM05D003493 ORTHO05D003980 2.5e-107 394.0 606 39.8
AUR62041605 Chenopodium quinoa HOM05D003493 ORTHO05D003980 2.5e-107 394.0 778 34.6
Nitab4.5_0003367g0050 Nicotiana tabacum HOM05D003493 ORTHO05D003980 1.2e-104 385.2 804 36.1
BcaNung05482 Brassica carinata HOM05D003493 ORTHO05D003980 7.6e-104 382.5 775 34.8
Oeu063704.1 Olea europaea HOM05D003493 ORTHO05D003980 6.5e-103 379.4 601 42.3
arahy.Tifrunner.gnm1.ann1.K1F8KI Arachis hypogaea HOM05D003493 ORTHO05D003980 2.7e-101 374.0 863 34.2
FAN13G0815 Fragaria x ananassa HOM05D003493 ORTHO05D003980 3.0e-100 370.5 983 30.6
Potri.018G152400 Populus trichocarpa HOM05D003493 ORTHO05D003980 4.3e-91 340.1 507 41.2
Ciclev10019478m.g Citrus clementina HOM05D003493 ORTHO05D003980 2.2e-90 337.8 510 41.4
Ca_25303_v3 Cicer arietinum L. HOM05D003493 ORTHO05D003980 1.4e-86 325.1 659 34.7
PGSC0003DMG400027062 Solanum tuberosum HOM05D003493 ORTHO05D003980 5.7e-83 313.2 302 52.0
vmacro17772 Vaccinium macrocarpon HOM05D003493 ORTHO05D003980 1.6e-80 305.1 436 43.6
Gohir.A05G111401 Gossypium hirsutum HOM05D003493 ORTHO05D003980 1.7e-79 301.6 573 37.3
AUR62040635 Chenopodium quinoa HOM05D003493 ORTHO05D003980 3.8e-79 300.4 612 34.6
Oeu034417.1 Olea europaea HOM05D003493 ORTHO05D003980 5.5e-78 296.6 411 44.5
AagrBONN_evm.TU.Sc2ySwM_368.2475 Anthoceros agrestis HOM05D003493 ORTHO05D003980 1.2e-77 295.4 832 29.3
Mapoly0036s0110 Marchantia polymorpha HOM05D003493 ORTHO05D003980 3.2e-70 270.8 777 28.3
Hund06742 Selenicereus undatus HOM05D003493 ORTHO05D001641 1.2e-69 268.9 946 27.6
DCAR_011394 Daucus carota HOM05D003493 ORTHO05D003980 1.4e-68 265.4 497 36.4
SMO361G0167 Selaginella moellendorffii HOM05D003493 ORTHO05D003980 1.4e-65 255.4 762 29.7
Pp3c1_25660 Physcomitrium patens HOM05D003493 ORTHO05D003980 1.7e-58 231.9 730 27.8
Pp3c17_10430 Physcomitrium patens HOM05D003493 ORTHO05D003980 8.3e-58 229.6 739 28.0
Pp3c5_12280 Physcomitrium patens HOM05D003493 ORTHO05D003980 2.9e-55 221.1 672 27.2
Pp3c14_11980 Physcomitrium patens HOM05D003493 ORTHO05D003980 1.5e-54 218.8 772 26.2
SEGI_25111 Sequoiadendron giganteum HOM05D003493 ORTHO05D003980 2.5e-54 218.0 419 37.0
Lj9C232G5 Lonicera japonica HOM05D003493 ORTHO05D003980 6.1e-53 213.4 354 40.7
Pp3c6_14220 Physcomitrium patens HOM05D003493 ORTHO05D003980 6.1e-53 213.4 586 27.3
arahy.Tifrunner.gnm1.ann1.Y1U1WE Arachis hypogaea HOM05D003493 ORTHO05D003980 7.0e-49 199.9 647 28.3
CiPaw.15G108700 Carya illinoinensis HOM05D003493 ORTHO05D003980 7.5e-43 179.9 383 36.3
Oeu034418.1 Olea europaea HOM05D003493 ORTHO05D003980 3.1e-36 157.9 280 36.8
COL.COLO4_22900 Corchorus olitorius HOM05D003493 ORTHO05D003980 1.1e-33 149.4 206 42.2
arahy.Tifrunner.gnm1.ann1.LRB6U9 Arachis hypogaea HOM05D003493 ORTHO05D003980 3.5e-32 144.4 487 27.9
DCAR_011395 Daucus carota HOM05D003493 ORTHO05D003980 1.5e-30 139.0 296 33.1
arahy.Tifrunner.gnm1.ann1.XZC4F6 Arachis hypogaea HOM05D003493 ORTHO05D003980 7.3e-30 136.7 296 32.1
arahy.Tifrunner.gnm1.ann1.28MV8S Arachis hypogaea HOM05D003493 ORTHO05D003980 1.1e-28 132.9 162 45.7
arahy.Tifrunner.gnm1.ann1.I3UW9X Arachis hypogaea HOM05D003493 ORTHO05D003980 3.8e-26 124.4 221 38.5
arahy.Tifrunner.gnm1.ann1.PSQB2R Arachis hypogaea HOM05D003493 ORTHO05D003980 1.9e-25 122.1 159 44.0
arahy.Tifrunner.gnm1.ann1.AF40JB Arachis hypogaea HOM05D003493 ORTHO05D003980 3.2e-25 121.3 159 43.4
Cpa.g.c43819 Carica papaya HOM05D003493 ORTHO05D003980 4.6e-24 117.5 116 49.1
Rhsim05G0011100 Rhododendron simsii HOM05D003493 ORTHO05D003980 9.6e-22 109.8 149 39.6
CiPaw.15G108800 Carya illinoinensis HOM05D003493 ORTHO05D003980 6.9e-20 103.6 225 34.7
COL.COLO4_22901 Corchorus olitorius HOM05D003493 ORTHO05D003980 2.2e-18 98.6 332 27.1
Cpa.g.c34760 Carica papaya HOM05D003493 ORTHO05D003980 6.0e-16 90.5 65 56.9
Hund22361 Selenicereus undatus HOM05D003493 ORTHO05D003980 1.3e-15 89.4 107 41.1
Peaxi162Scf00050g00625 Petunia axillaris HOM05D000386 ORTHO05D000406 5.6e-14 84.0 120 40.0
Cpa.g.sc829.1 Carica papaya HOM05D003493 ORTHO05D003980 1.4e-12 79.3 200 27.5
QL10p036801 Quercus lobata HOM05D003493 ORTHO05D003980 2.9e-10 71.6 191 31.4
MCO11G907 Micromonas commoda HOM05D003493 ORTHO05D003980 3.2e-09 68.2 476 20.6
AUR62040636 Chenopodium quinoa HOM05D003493 ORTHO05D003980 4.2e-09 67.8 149 34.9
arahy.Tifrunner.gnm1.ann1.XN9UYN Arachis hypogaea HOM05D003493 ORTHO05D003980 5.4e-09 67.4 130 33.1
arahy.Tifrunner.gnm1.ann1.PE1W7W Arachis hypogaea HOM05D003493 ORTHO05D003980 1.2e-08 66.2 131 32.1
Ca_25290_v3 Cicer arietinum L. HOM05D003493 ORTHO05D015411 1.0e-07 63.2 53 49.1
arahy.Tifrunner.gnm1.ann1.3LZL4F Arachis hypogaea HOM05D003493 ORTHO05D003980 1.3e-07 62.8 148 35.1


User provided reference genes

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