Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb225910 Zea mays HOM05D003885 ORTHO05D444501 6.9e-96 354.0 182 100.0
Zm00001eb119790 Zea mays HOM05D003885 ORTHO05D004623 6.7e-14 81.6 78 65.4
Zm00001eb338740 Zea mays HOM05D003885 ORTHO05D004623 1.5e-13 80.5 78 67.9
Os06g0106100 Oryza sativa ssp. japonica HOM05D003885 ORTHO05D004623 1.1e-11 74.3 49 85.7
Atru.chr2.3832 Acer truncatum HOM05D003885 ORTHO05D004623 3.2e-08 62.8 78 53.8
AUR62017134 Chenopodium quinoa HOM05D003885 ORTHO05D004623 5.5e-08 62.0 79 51.9
Ah.13g073470 Amaranthus hybridus HOM05D003885 ORTHO05D004623 7.1e-08 61.6 73 56.2
HPP92_015188 Vanilla planifolia HOM05D003885 ORTHO05D004623 1.2e-07 60.8 51 68.6
Thhalv10021450m.g Eutrema salsugineum HOM05D003885 ORTHO05D004623 2.1e-07 60.1 49 69.4
Haze_09860 Corylus avellana HOM05D003885 ORTHO05D004623 2.7e-07 59.7 49 69.4
Ah.06g181560 Amaranthus hybridus HOM05D003885 ORTHO05D004623 3.5e-07 59.3 61 57.4
BcaB04g18746 Brassica carinata HOM05D003885 ORTHO05D004623 3.5e-07 59.3 48 68.8
Carub.0003s1256 Capsella rubella HOM05D003885 ORTHO05D004623 3.5e-07 59.3 48 68.8
COL.COLO4_07729 Corchorus olitorius HOM05D003885 ORTHO05D004623 3.5e-07 59.3 61 63.9
Sc03g0011570 Simmondsia chinensis HOM05D003885 ORTHO05D004623 3.5e-07 59.3 78 55.1
Nn1g07559 Nelumbo nucifera HOM05D003885 ORTHO05D004623 4.6e-07 58.9 48 68.8
AL3G24950 Arabidopsis lyrata HOM05D003885 ORTHO05D004623 6.0e-07 58.5 61 57.4
QL08p003216 Quercus lobata HOM05D003885 ORTHO05D004623 6.0e-07 58.5 77 53.2
Eucgr.F02030 Eucalyptus grandis HOM05D003885 ORTHO05D004623 7.9e-07 58.2 76 53.9
Nitab4.5_0005478g0040 Nicotiana tabacum HOM05D003885 ORTHO05D004623 7.9e-07 58.2 50 70.0
BcaB06g25479 Brassica carinata HOM05D003885 ORTHO05D004623 1.0e-06 57.8 61 57.4
A05p36370 Brassica napus HOM05D003885 ORTHO05D004623 1.0e-06 57.8 61 57.4
BraA05t22437Z Brassica rapa HOM05D003885 ORTHO05D004623 1.0e-06 57.8 61 57.4
Cfa016929 Carpinus fangiana HOM05D003885 ORTHO05D004623 1.0e-06 57.8 49 69.4
CiPaw.12G140300 Carya illinoinensis HOM05D003885 ORTHO05D004623 1.0e-06 57.8 51 64.7
FAN14G2004 Fragaria x ananassa HOM05D003885 ORTHO05D004623 1.0e-06 57.8 80 48.8
Sp3g11380 Schrenkiella parvula HOM05D003885 ORTHO05D004623 1.0e-06 57.8 48 66.7
CSS0008032 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 1.3e-06 57.4 78 48.7
CSS0014433 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 1.3e-06 57.4 78 48.7
CAN.G492.53 Capsicum annuum HOM05D003885 ORTHO05D004623 1.3e-06 57.4 49 69.4
Nn1g07757 Nelumbo nucifera HOM05D003885 ORTHO05D004623 1.3e-06 57.4 73 53.4
Aa31LG8G410 Aethionema arabicum HOM05D003885 ORTHO05D004623 1.8e-06 57.0 61 55.7
Ciclev10009386m.g Citrus clementina HOM05D003885 ORTHO05D004623 1.8e-06 57.0 61 60.7
Gohir.D13G134400 Gossypium hirsutum HOM05D003885 ORTHO05D004623 2.3e-06 56.6 61 59.0
Hund01874 Selenicereus undatus HOM05D003885 ORTHO05D004623 3.0e-06 56.2 77 51.9
Hund01875 Selenicereus undatus HOM05D003885 ORTHO05D004623 3.0e-06 56.2 77 51.9
TAR629G2602 Trochodendron aralioides HOM05D003885 ORTHO05D004623 3.0e-06 56.2 48 66.7
Gohir.A13G131100 Gossypium hirsutum HOM05D003885 ORTHO05D004623 3.9e-06 55.8 61 59.0
Gorai.013G150700 Gossypium raimondii HOM05D003885 ORTHO05D004623 3.9e-06 55.8 61 59.0
Sabra16G0243800 Salix brachista HOM05D003885 ORTHO05D004623 3.9e-06 55.8 95 46.3
Duzib213G0370 Durio zibethinus HOM05D003885 ORTHO05D004623 5.1e-06 55.5 61 57.4
BcaC05g29203 Brassica carinata HOM05D003885 ORTHO05D004623 6.7e-06 55.1 59 57.6
C05p54750 Brassica napus HOM05D003885 ORTHO05D004623 6.7e-06 55.1 59 57.6
BolC5t34149H Brassica oleracea HOM05D003885 ORTHO05D004623 6.7e-06 55.1 59 57.6
Hma1.2p1_0193F.1_g083890 Hydrangea macrophylla HOM05D003885 ORTHO05D004623 6.7e-06 55.1 50 64.0
C01p51880 Brassica napus HOM05D003885 ORTHO05D004623 8.7e-06 54.7 59 57.6
BolC1t05136H Brassica oleracea HOM05D003885 ORTHO05D004623 8.7e-06 54.7 59 57.6


User provided reference genes

Program Settings