Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb225360 Zea mays HOM05D006759 ORTHO05D008633 2.2e-171 605.5 300 100.0
Os06g0682900 Oryza sativa ssp. japonica HOM05D006759 ORTHO05D008633 1.0e-144 516.9 302 85.1
TWI38G2336 Tripterygium wilfordii HOM05D006759 ORTHO05D008633 2.1e-113 412.9 292 68.2
QL05p077196 Quercus lobata HOM05D006759 ORTHO05D008633 9.6e-111 404.1 278 69.8
QL93p0073_1304 Quercus lobata HOM05D006759 ORTHO05D008633 1.3e-110 403.7 278 69.8
Dinv17853 Davidia involucrata HOM05D006759 ORTHO05D008633 4.8e-110 401.7 263 71.9
CSS0000245 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 6.3e-110 401.4 280 68.6
MELO3C002513.2 Cucumis melo HOM05D006759 ORTHO05D008633 8.2e-110 401.0 281 70.1
PSO170G0831 Papaver somniferum HOM05D006759 ORTHO05D008633 1.4e-109 400.2 283 70.0
CsaV3_1G011360 Cucumis sativus L. HOM05D006759 ORTHO05D008633 1.8e-109 399.8 281 70.1
CSS0002106 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 2.4e-109 399.4 280 68.2
Rhsim02G0115500 Rhododendron simsii HOM05D006759 ORTHO05D008633 3.1e-109 399.1 278 69.1
TAR626G1069 Trochodendron aralioides HOM05D006759 ORTHO05D008633 3.1e-109 399.1 277 70.8
MD10G1311200 Malus domestica HOM05D006759 ORTHO05D008633 5.3e-109 398.3 280 70.7
CANSAT56G4156 Cannabis sativa HOM05D006759 ORTHO05D008633 6.9e-109 397.9 281 68.0
Cfa016405 Carpinus fangiana HOM05D006759 ORTHO05D008633 6.9e-109 397.9 279 68.5
Eucgr.D00856 Eucalyptus grandis HOM05D006759 ORTHO05D008633 9.0e-109 397.5 280 68.6
Ciclev10016144m.g Citrus clementina HOM05D006759 ORTHO05D008633 2.0e-108 396.4 292 65.1
vmacro15843 Vaccinium macrocarpon HOM05D006759 ORTHO05D008633 2.0e-108 396.4 280 68.6
CiPaw.09G080000 Carya illinoinensis HOM05D006759 ORTHO05D008633 2.6e-108 396.0 281 68.3
PGR004G2806 Punica granatum HOM05D006759 ORTHO05D008633 3.4e-108 395.6 281 69.0
FAN21G1217 Fragaria x ananassa HOM05D006759 ORTHO05D008633 5.9e-108 394.8 281 68.7
FAN21G3610 Fragaria x ananassa HOM05D006759 ORTHO05D008633 5.9e-108 394.8 281 68.7
FvH4_3g02960 Fragaria vesca HOM05D006759 ORTHO05D008633 1.7e-107 393.3 296 66.2
Nn1g03732 Nelumbo nucifera HOM05D006759 ORTHO05D008633 1.7e-107 393.3 266 72.6
RcHm_v2.0_Chr5g0004601 Rosa chinensis HOM05D006759 ORTHO05D008633 2.2e-107 392.9 281 68.7
ClCG03G005150 Citrullus lanatus HOM05D006759 ORTHO05D008633 3.8e-107 392.1 290 66.6
MBI02_g02472_MAGBIO Magnolia biondii HOM05D006759 ORTHO05D008633 5.0e-107 391.7 330 62.1
Prupe.4G029700 Prunus persica HOM05D006759 ORTHO05D008633 6.5e-107 391.3 275 68.7
Haze_06682 Corylus avellana HOM05D006759 ORTHO05D008633 8.4e-107 391.0 281 67.6
Lalb_Chr05g0218011 Lupinus albus HOM05D006759 ORTHO05D008633 1.9e-106 389.8 280 65.4
FAN25G0528 Fragaria x ananassa HOM05D006759 ORTHO05D008633 5.5e-106 388.3 281 68.0
MSTRG.15955 Avicennia marina HOM05D006759 ORTHO05D008633 7.2e-106 387.9 280 66.8
Manes.16G016600 Manihot esculenta HOM05D006759 ORTHO05D008633 7.2e-106 387.9 278 67.3
Migut.M01261 Erythranthe guttata HOM05D006759 ORTHO05D008633 9.3e-106 387.5 280 65.7
SGA_v2.0_scaffold7G03895 Striga asiatica HOM05D006759 ORTHO05D008633 9.3e-106 387.5 280 66.4
Peaxi162Scf00082g01114 Petunia axillaris HOM05D006759 ORTHO05D008633 1.2e-105 387.1 282 64.9
CDE05G1382 Ceratophyllum demersum HOM05D006759 ORTHO05D008633 1.6e-105 386.7 266 67.3
Potri.011G031600 Populus trichocarpa HOM05D006759 ORTHO05D008633 1.6e-105 386.7 280 64.6
SalBow8G2756 Salvia bowleyana HOM05D006759 ORTHO05D008633 1.6e-105 386.7 277 67.1
Gorai.011G019000 Gossypium raimondii HOM05D006759 ORTHO05D008633 2.1e-105 386.3 280 66.1
Nitab4.5_0006475g0040 Nicotiana tabacum HOM05D006759 ORTHO05D008633 2.1e-105 386.3 285 64.9
Sc05g0008410 Simmondsia chinensis HOM05D006759 ORTHO05D008633 2.1e-105 386.3 269 68.0
Cpa.g.sc81.5 Carica papaya HOM05D006759 ORTHO05D008633 6.1e-105 384.8 281 66.9
Lj4g0006967 Lotus japonicus HOM05D006759 ORTHO05D008633 7.9e-105 384.4 281 64.4
Atru.chr10.2043 Acer truncatum HOM05D006759 ORTHO05D008633 1.0e-104 384.0 281 66.5
Sabra11G0019100 Salix brachista HOM05D006759 ORTHO05D008633 1.0e-104 384.0 280 64.6
Nitab4.5_0002345g0080 Nicotiana tabacum HOM05D006759 ORTHO05D008633 1.3e-104 383.6 285 64.6
Oeu058167.4 Olea europaea HOM05D006759 ORTHO05D008633 3.0e-104 382.5 302 61.9
arahy.Tifrunner.gnm1.ann1.13LU1X Arachis hypogaea HOM05D006759 ORTHO05D008633 5.1e-104 381.7 280 66.1
Sabra11G0024900 Salix brachista HOM05D006759 ORTHO05D008633 5.1e-104 381.7 280 65.0
arahy.Tifrunner.gnm1.ann1.6345FV Arachis hypogaea HOM05D006759 ORTHO05D008633 6.7e-104 381.3 278 66.2
Gohir.A10G017000 Gossypium hirsutum HOM05D006759 ORTHO05D008633 8.7e-104 380.9 280 65.0
Duzib160G0398 Durio zibethinus HOM05D006759 ORTHO05D008633 1.5e-103 380.2 280 66.1
CAN.G424.100 Capsicum annuum HOM05D006759 ORTHO05D008633 1.9e-103 379.8 281 65.1
Gohir.D10G017100 Gossypium hirsutum HOM05D006759 ORTHO05D008633 7.4e-103 377.9 280 64.6
Thecc.06G208000 Theobroma cacao HOM05D006759 ORTHO05D008633 9.7e-103 377.5 280 65.0
Ca_18449_v3 Cicer arietinum L. HOM05D006759 ORTHO05D008633 2.2e-102 376.3 281 64.4
THA.LOC104812582 Tarenaya hassleriana HOM05D006759 ORTHO05D008633 2.2e-102 376.3 290 64.1
Psat7g105480 Pisum sativum HOM05D006759 ORTHO05D008633 3.7e-102 375.6 281 63.3
Medtr4g092110 Medicago truncatula HOM05D006759 ORTHO05D008633 4.8e-102 375.2 280 63.9
ECA236G1815 Erigeron canadensis HOM05D006759 ORTHO05D008633 6.3e-102 374.8 284 62.0
ATR0073G021 Amborella trichopoda HOM05D006759 ORTHO05D008633 8.2e-102 374.4 260 68.8
CARHR227890 Cardamine hirsuta HOM05D006759 ORTHO05D008633 1.1e-101 374.0 280 65.7
HanXRQChr05g0130811 Helianthus annuus HOM05D006759 ORTHO05D008633 1.4e-101 373.6 269 64.3
Lsat_1_v5_gn_7_18360 Lactuca sativa HOM05D006759 ORTHO05D008633 1.8e-101 373.2 278 64.4
PGSC0003DMG400021726 Solanum tuberosum HOM05D006759 ORTHO05D008633 4.1e-101 372.1 279 64.2
Ah.14g088500 Amaranthus hybridus HOM05D006759 ORTHO05D008633 6.9e-101 371.3 260 67.3
Cc02_g11810 Coffea canephora HOM05D006759 ORTHO05D008633 6.9e-101 371.3 283 62.9
Thhalv10025914m.g Eutrema salsugineum HOM05D006759 ORTHO05D008633 9.0e-101 370.9 280 64.3
COL.COLO4_31683 Corchorus olitorius HOM05D006759 ORTHO05D008633 1.5e-100 370.2 280 62.9
AL7G32800 Arabidopsis lyrata HOM05D006759 ORTHO05D008633 2.6e-100 369.4 280 64.3
BolC7t45615H Brassica oleracea HOM05D006759 ORTHO05D008633 2.6e-100 369.4 281 63.3
AUR62014623 Chenopodium quinoa HOM05D006759 ORTHO05D008633 2.6e-100 369.4 292 62.0
AT4G21320 Arabidopsis thaliana HOM05D006759 ORTHO05D008633 5.9e-100 368.2 280 64.3
A03p52720 Brassica napus HOM05D006759 ORTHO05D008633 7.7e-100 367.9 279 63.4
Carub.0007s2012 Capsella rubella HOM05D006759 ORTHO05D008633 7.7e-100 367.9 280 64.3
DCAR_028150 Daucus carota HOM05D006759 ORTHO05D008633 1.0e-99 367.5 264 63.6
Sopen02g024680 Solanum pennellii HOM05D006759 ORTHO05D008633 1.0e-99 367.5 279 64.2
Glyma.08G062300 Glycine max HOM05D006759 ORTHO05D008633 1.3e-99 367.1 276 63.0
HPP92_027153 Vanilla planifolia HOM05D006759 ORTHO05D008633 1.7e-99 366.7 249 70.7
BcaNung00862 Brassica carinata HOM05D006759 ORTHO05D008633 2.2e-99 366.3 261 66.3
C07p51160 Brassica napus HOM05D006759 ORTHO05D008633 2.2e-99 366.3 261 66.3
Solyc02g079930.3 Solanum lycopersicum HOM05D006759 ORTHO05D008633 2.9e-99 365.9 279 64.2
Aa31LG6G3340 Aethionema arabicum HOM05D006759 ORTHO05D008633 3.8e-99 365.5 281 63.0
BraA03t14346Z Brassica rapa HOM05D006759 ORTHO05D008633 5.0e-99 365.2 261 65.9
AUR62012578 Chenopodium quinoa HOM05D006759 ORTHO05D008633 2.5e-98 362.8 292 61.0
Sp7g19390 Schrenkiella parvula HOM05D006759 ORTHO05D008633 4.2e-98 362.1 281 63.3
BcaC06g30660 Brassica carinata HOM05D006759 ORTHO05D008633 1.2e-97 360.5 281 63.0
Hund21315 Selenicereus undatus HOM05D006759 ORTHO05D008633 1.0e-96 357.5 254 67.7
EL10As6g23697 Beta vulgaris HOM05D006759 ORTHO05D008633 5.1e-96 355.1 292 60.6
Sed0013464 Sechium edule HOM05D006759 ORTHO05D008633 5.1e-96 355.1 248 69.4
TPR.G13912 Trifolium pratense HOM05D006759 ORTHO05D008633 1.1e-95 354.0 276 61.6
unitig_37.g12139 Utricularia gibba HOM05D006759 ORTHO05D008633 1.1e-95 354.0 279 61.3
Lj1C1222T1 Lonicera japonica HOM05D006759 ORTHO05D008633 1.9e-90 336.7 239 66.5
Phvul.002G218300 Phaseolus vulgaris HOM05D006759 ORTHO05D008633 3.6e-89 332.4 261 60.2
VMungo0251G0437 Vigna mungo HOM05D006759 ORTHO05D008633 3.7e-86 322.4 278 57.9
GSVIVG01004352001 Vitis vinifera HOM05D006759 ORTHO05D008633 1.1e-82 310.8 215 69.3
SEGI_30514 Sequoiadendron giganteum HOM05D006759 ORTHO05D008633 2.1e-81 306.6 262 57.6
Mapoly0122s0010 Marchantia polymorpha HOM05D006759 ORTHO05D008633 7.5e-71 271.6 269 52.4
AagrBONN_evm.TU.Sc2ySwM_117.529 Anthoceros agrestis HOM05D006759 ORTHO05D008633 1.6e-68 263.8 257 48.2
Pp3c22_820 Physcomitrium patens HOM05D006759 ORTHO05D008633 4.5e-68 262.3 255 50.6
Pp3c18_19780 Physcomitrium patens HOM05D006759 ORTHO05D008633 5.9e-68 261.9 255 49.4
Actinidia36908 Actinidia chinensis HOM05D006759 ORTHO05D008633 4.9e-62 242.3 162 67.9
SMO327G0040 Selaginella moellendorffii HOM05D006759 ORTHO05D008633 4.1e-45 186.0 255 41.6
Nn2g12529 Nelumbo nucifera HOM05D006759 ORTHO05D008633 1.2e-44 184.5 152 60.5
GSVIVG01002901001 Vitis vinifera HOM05D006759 ORTHO05D008633 4.1e-37 159.5 111 70.3
RcHm_v2.0_Chr5g0004571 Rosa chinensis HOM05D006759 ORTHO05D008633 3.3e-34 149.8 129 56.6
Nn7g36203 Nelumbo nucifera HOM05D006759 ORTHO05D008633 1.2e-31 141.4 106 67.9
Hund21313 Selenicereus undatus HOM05D006759 ORTHO05D008633 7.6e-31 138.7 229 43.2
Glyma.07G186901 Glycine max HOM05D006759 ORTHO05D008633 4.9e-30 136.0 94 62.8
CANSAT21G1109 Cannabis sativa HOM05D006759 ORTHO05D008633 8.4e-30 135.2 97 63.9
Potri.004G031100 Populus trichocarpa HOM05D006759 ORTHO05D008633 3.5e-28 129.8 189 39.7
Aqoxy1G03825 Aquilegia oxysepala HOM05D006759 ORTHO05D008633 3.9e-27 126.3 89 70.8
COL.COLO4_37489 Corchorus olitorius HOM05D006759 ORTHO05D161314 7.8e-20 102.1 101 56.4
COL.COLO4_11824 Corchorus olitorius HOM05D000068 ORTHO05D000084 2.3e-19 100.5 67 68.7
GSVIVG01004471001 Vitis vinifera HOM05D006759 ORTHO05D008633 3.0e-19 100.1 78 60.3


User provided reference genes

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