Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb224960 Zea mays HOM05D004519 ORTHO05D006283 3.1e-262 907.9 448 100.0
Zm00001eb025080 Zea mays HOM05D004519 ORTHO05D006283 7.4e-240 833.6 448 92.0
Os10g0577900 Oryza sativa ssp. japonica HOM05D004519 ORTHO05D006283 1.7e-196 689.5 452 77.2
Nn3g19385 Nelumbo nucifera HOM05D004519 ORTHO05D006283 6.6e-156 554.7 392 67.3
Sc01g0007150 Simmondsia chinensis HOM05D004519 ORTHO05D006283 7.3e-155 551.2 355 72.1
Ciclev10001047m.g Citrus clementina HOM05D004519 ORTHO05D006283 1.5e-152 543.5 355 69.6
Manes.17G018849 Manihot esculenta HOM05D004519 ORTHO05D006283 1.5e-152 543.5 357 69.7
Nn1g00218 Nelumbo nucifera HOM05D004519 ORTHO05D006283 2.6e-152 542.7 392 67.1
RcHm_v2.0_Chr7g0211781 Rosa chinensis HOM05D004519 ORTHO05D006283 4.9e-151 538.5 361 68.1
CsaV3_3G048840 Cucumis sativus L. HOM05D004519 ORTHO05D006283 8.3e-151 537.7 358 70.1
GSVIVG01013060001 Vitis vinifera HOM05D004519 ORTHO05D006283 1.4e-150 537.0 357 70.6
MELO3C003440.2 Cucumis melo HOM05D004519 ORTHO05D006283 1.9e-150 536.6 358 70.4
MD06G1026700 Malus domestica HOM05D004519 ORTHO05D006283 2.4e-150 536.2 355 68.5
PSO063G4347 Papaver somniferum HOM05D004519 ORTHO05D006283 5.4e-150 535.0 357 68.1
Aqoxy3G02176 Aquilegia oxysepala HOM05D004519 ORTHO05D006283 7.1e-150 534.6 376 67.0
Eucgr.E00228 Eucalyptus grandis HOM05D004519 ORTHO05D006283 1.2e-149 533.9 355 69.3
MD16G1279400 Malus domestica HOM05D004519 ORTHO05D006283 1.6e-149 533.5 359 67.7
TAR629G2035 Trochodendron aralioides HOM05D004519 ORTHO05D006283 2.1e-149 533.1 355 69.9
CiPaw.11G098500 Carya illinoinensis HOM05D004519 ORTHO05D006283 4.6e-149 531.9 355 69.6
FAN13G3061 Fragaria x ananassa HOM05D004519 ORTHO05D006283 4.6e-149 531.9 359 68.0
FvH4_5g23060 Fragaria vesca HOM05D004519 ORTHO05D006283 6.0e-149 531.6 359 67.4
FAN04G1490 Fragaria x ananassa HOM05D004519 ORTHO05D006283 6.0e-149 531.6 359 67.4
FAN18G3814 Fragaria x ananassa HOM05D004519 ORTHO05D006283 6.0e-149 531.6 359 67.4
PGR042G1943 Punica granatum HOM05D004519 ORTHO05D006283 1.0e-148 530.8 444 61.5
PSO782G3212 Papaver somniferum HOM05D004519 ORTHO05D006283 1.3e-148 530.4 357 67.5
Aa31LG2G13810 Aethionema arabicum HOM05D004519 ORTHO05D006283 6.6e-148 528.1 357 67.5
Hma1.2p1_1569F.1_g291200 Hydrangea macrophylla HOM05D004519 ORTHO05D006283 1.1e-147 527.3 357 68.9
Dinv29004 Davidia involucrata HOM05D004519 ORTHO05D006283 1.5e-147 526.9 357 70.0
CSS0024637 Camellia sinensis var. sinensis HOM05D004519 ORTHO05D006283 2.5e-147 526.2 357 68.3
Gorai.004G182200 Gossypium raimondii HOM05D004519 ORTHO05D006283 3.3e-147 525.8 446 59.9
Potri.001G136600 Populus trichocarpa HOM05D004519 ORTHO05D006283 5.6e-147 525.0 357 67.2
Sed0022223 Sechium edule HOM05D004519 ORTHO05D006283 5.6e-147 525.0 355 68.5
CANSAT01G0127 Cannabis sativa HOM05D004519 ORTHO05D006283 7.3e-147 524.6 354 67.8
Cfa012505 Carpinus fangiana HOM05D004519 ORTHO05D006283 9.5e-147 524.2 357 68.6
AL1G46330 Arabidopsis lyrata HOM05D004519 ORTHO05D006283 2.1e-146 523.1 357 66.4
FAN18G1908 Fragaria x ananassa HOM05D004519 ORTHO05D006283 2.1e-146 523.1 375 64.8
Thhalv10007540m.g Eutrema salsugineum HOM05D004519 ORTHO05D006283 4.7e-146 521.9 357 66.9
Gohir.A11G028600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 6.2e-146 521.5 357 69.2
BcaC05g27251 Brassica carinata HOM05D004519 ORTHO05D006283 8.1e-146 521.2 357 66.4
Gorai.007G033500 Gossypium raimondii HOM05D004519 ORTHO05D006283 8.1e-146 521.2 357 68.9
C05p31600 Brassica napus HOM05D004519 ORTHO05D006283 1.1e-145 520.8 357 66.4
BolC5t31883H Brassica oleracea HOM05D004519 ORTHO05D006283 1.1e-145 520.8 357 66.4
Oeu027094.2 Olea europaea HOM05D004519 ORTHO05D006283 1.4e-145 520.4 357 66.7
CiPaw.12G068400 Carya illinoinensis HOM05D004519 ORTHO05D006283 1.8e-145 520.0 380 66.8
Gohir.D11G030600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 1.8e-145 520.0 357 68.9
Migut.E00743 Erythranthe guttata HOM05D004519 ORTHO05D006283 3.1e-145 519.2 363 65.8
Carub.0001s3053 Capsella rubella HOM05D004519 ORTHO05D006283 4.0e-145 518.8 408 61.0
Cc08_g03490 Coffea canephora HOM05D004519 ORTHO05D006283 4.0e-145 518.8 365 67.1
AT1G32200 Arabidopsis thaliana HOM05D004519 ORTHO05D006283 1.2e-144 517.3 357 65.5
MBI04_g32203_MAGBIO Magnolia biondii HOM05D004519 ORTHO05D006283 1.2e-144 517.3 409 60.9
Nitab4.5_0000529g0120 Nicotiana tabacum HOM05D004519 ORTHO05D006283 2.0e-144 516.5 354 67.5
A09p34000 Brassica napus HOM05D004519 ORTHO05D006283 9.9e-144 514.2 357 65.5
Dinv25262 Davidia involucrata HOM05D004519 ORTHO05D006283 9.9e-144 514.2 357 67.8
Glyma.09G207900 Glycine max HOM05D004519 ORTHO05D006283 9.9e-144 514.2 358 65.9
Lj4g0001331 Lotus japonicus HOM05D004519 ORTHO05D006283 9.9e-144 514.2 386 63.7
Gohir.A03G000032 Gossypium hirsutum HOM05D004519 ORTHO05D006283 1.7e-143 513.5 357 67.5
Sp1g27880 Schrenkiella parvula HOM05D004519 ORTHO05D006283 1.7e-143 513.5 469 57.4
HanXRQChr03g0083251 Helianthus annuus HOM05D004519 ORTHO05D006283 2.2e-143 513.1 356 65.4
Lalb_Chr09g0325481 Lupinus albus HOM05D004519 ORTHO05D006283 2.9e-143 512.7 358 66.8
THA.LOC104812759 Tarenaya hassleriana HOM05D004519 ORTHO05D006283 3.8e-143 512.3 355 68.2
CARHR031570 Cardamine hirsuta HOM05D004519 ORTHO05D006283 6.4e-143 511.5 459 57.1
Glyma.01G014200 Glycine max HOM05D004519 ORTHO05D006283 1.4e-142 510.4 358 64.8
Duzib205G0301 Durio zibethinus HOM05D004519 ORTHO05D006283 2.4e-142 509.6 399 62.4
THA.LOC104814413 Tarenaya hassleriana HOM05D004519 ORTHO05D006283 2.4e-142 509.6 356 67.1
BcaB07g32892 Brassica carinata HOM05D004519 ORTHO05D006283 3.2e-142 509.2 452 57.1
ATR0829G164 Amborella trichopoda HOM05D004519 ORTHO05D006283 4.2e-142 508.8 431 57.8
MSTRG.24848 Avicennia marina HOM05D004519 ORTHO05D006283 4.2e-142 508.8 355 65.6
ClCG09G011630 Citrullus lanatus HOM05D004519 ORTHO05D006283 4.2e-142 508.8 372 65.3
BcaB03g13753 Brassica carinata HOM05D004519 ORTHO05D006283 5.4e-142 508.4 357 64.7
Gorai.003G185500 Gossypium raimondii HOM05D004519 ORTHO05D006283 7.1e-142 508.1 357 66.9
Psat2g139000 Pisum sativum HOM05D004519 ORTHO05D006283 7.1e-142 508.1 358 65.1
BcaC05g27905 Brassica carinata HOM05D004519 ORTHO05D006283 9.2e-142 507.7 452 57.5
CAN.G726.25 Capsicum annuum HOM05D004519 ORTHO05D006283 9.2e-142 507.7 383 64.5
A05p25130 Brassica napus HOM05D004519 ORTHO05D006283 1.2e-141 507.3 442 57.9
BolC8t47999H Brassica oleracea HOM05D004519 ORTHO05D006283 3.5e-141 505.8 417 60.4
BraA05t21393Z Brassica rapa HOM05D004519 ORTHO05D006283 3.5e-141 505.8 455 56.5
Lalb_Chr16g0381061 Lupinus albus HOM05D004519 ORTHO05D006283 4.6e-141 505.4 358 65.6
BcaC07g37628 Brassica carinata HOM05D004519 ORTHO05D006283 6.0e-141 505.0 417 60.4
VMungo1215G0394 Vigna mungo HOM05D004519 ORTHO05D006283 7.8e-141 504.6 357 64.7
CSS0001538 Camellia sinensis var. sinensis HOM05D004519 ORTHO05D006283 1.0e-140 504.2 333 70.3
HanXRQChr13g0414231 Helianthus annuus HOM05D004519 ORTHO05D006283 1.0e-140 504.2 353 65.2
SGA_v2.0_scaffold198G41070 Striga asiatica HOM05D004519 ORTHO05D006283 1.0e-140 504.2 347 66.9
TPR.G19434 Trifolium pratense HOM05D004519 ORTHO05D006283 1.7e-140 503.4 358 64.2
A08p09320 Brassica napus HOM05D004519 ORTHO05D006283 3.9e-140 502.3 417 60.2
BraA08t32930Z Brassica rapa HOM05D004519 ORTHO05D006283 3.9e-140 502.3 417 60.2
Solyc08g076470.4 Solanum lycopersicum HOM05D004519 ORTHO05D006283 3.9e-140 502.3 389 62.7
Medtr5g029230 Medicago truncatula HOM05D004519 ORTHO05D006283 5.1e-140 501.9 358 64.5
BcaB04g17996 Brassica carinata HOM05D004519 ORTHO05D006283 6.6e-140 501.5 446 57.4
Phvul.002G136600 Phaseolus vulgaris HOM05D004519 ORTHO05D006283 3.3e-139 499.2 357 64.1
Sopen08g025050 Solanum pennellii HOM05D004519 ORTHO05D006283 4.3e-139 498.8 411 60.6
AUR62018641 Chenopodium quinoa HOM05D004519 ORTHO05D006283 5.6e-139 498.4 353 65.2
Sabra01G0105700 Salix brachista HOM05D004519 ORTHO05D006283 2.1e-138 496.5 404 59.2
SEGI_02196 Sequoiadendron giganteum HOM05D004519 ORTHO05D006283 2.1e-138 496.5 444 55.4
AUR62007353 Chenopodium quinoa HOM05D004519 ORTHO05D006283 2.8e-138 496.1 376 62.2
ECA240G3299 Erigeron canadensis HOM05D004519 ORTHO05D006283 3.6e-138 495.7 354 63.3
Ca_25177_v3 Cicer arietinum L. HOM05D004519 ORTHO05D006283 4.7e-138 495.4 349 66.5
Lsat_1_v5_gn_6_80100 Lactuca sativa HOM05D004519 ORTHO05D006283 6.2e-138 495.0 354 63.8
Gohir.D03G176300 Gossypium hirsutum HOM05D004519 ORTHO05D006283 4.0e-137 492.3 333 69.4
CDE12G0245 Ceratophyllum demersum HOM05D004519 ORTHO05D006283 2.0e-136 490.0 333 67.3
QL12p001672 Quercus lobata HOM05D004519 ORTHO05D006283 7.8e-133 478.0 478 51.0
Prupe.5G027200 Prunus persica HOM05D004519 ORTHO05D006283 5.1e-132 475.3 357 63.9
vmacro00276 Vaccinium macrocarpon HOM05D004519 ORTHO05D006283 1.6e-130 470.3 353 64.3
BraA09t38946Z Brassica rapa HOM05D004519 ORTHO05D006283 6.2e-130 468.4 357 61.9
C05p39140 Brassica napus HOM05D004519 ORTHO05D006283 1.1e-129 467.6 412 58.3
Rhsim11G0021900 Rhododendron simsii HOM05D004519 ORTHO05D006283 1.5e-128 463.8 352 63.1
arahy.Tifrunner.gnm1.ann1.BI8WMI Arachis hypogaea HOM05D004519 ORTHO05D006283 4.5e-128 462.2 335 63.9
arahy.Tifrunner.gnm1.ann1.D9NVDI Arachis hypogaea HOM05D004519 ORTHO05D006283 4.5e-128 462.2 335 63.9
CDE04G2515 Ceratophyllum demersum HOM05D004519 ORTHO05D006283 5.8e-128 461.8 337 64.7
DCAR_008221 Daucus carota HOM05D004519 ORTHO05D006283 3.5e-125 452.6 373 58.7
Thecc.03G310400 Theobroma cacao HOM05D004519 ORTHO05D006283 1.3e-124 450.7 357 61.1
unitig_32.g10899 Utricularia gibba HOM05D004519 ORTHO05D006283 1.8e-124 450.3 312 63.8
Mapoly0045s0098 Marchantia polymorpha HOM05D004519 ORTHO05D006283 2.3e-124 449.9 355 56.9
Gohir.D08G174500 Gossypium hirsutum HOM05D004519 ORTHO05D006283 3.3e-123 446.0 378 60.1
Nitab4.5_0012493g0010 Nicotiana tabacum HOM05D004519 ORTHO05D006283 2.8e-122 443.0 291 69.4
Gohir.A08G153600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 3.7e-122 442.6 378 59.8
Duzib068G1409 Durio zibethinus HOM05D004519 ORTHO05D006283 1.4e-121 440.7 457 52.3
EL10Ac5g12013 Beta vulgaris HOM05D004519 ORTHO05D006283 9.0e-121 438.0 377 55.4
Pp3c7_2970 Physcomitrium patens HOM05D004519 ORTHO05D006283 2.0e-120 436.8 355 53.8
Lj2A231G41 Lonicera japonica HOM05D004519 ORTHO05D006283 2.9e-119 433.0 383 56.7
Haze_08164 Corylus avellana HOM05D004519 ORTHO05D006283 1.2e-117 427.6 337 62.9
HPP92_020895 Vanilla planifolia HOM05D004519 ORTHO05D006283 2.7e-117 426.4 348 60.3
FAN08G3243 Fragaria x ananassa HOM05D004519 ORTHO05D006283 2.3e-116 423.3 316 63.3
SMO244G0022 Selaginella moellendorffii HOM05D004519 ORTHO05D006283 9.6e-115 417.9 353 55.0
HanXRQChr06g0172791 Helianthus annuus HOM05D004519 ORTHO05D006283 1.4e-113 414.1 354 58.5
Peaxi162Scf00170g00818 Petunia axillaris HOM05D004519 ORTHO05D006283 5.3e-113 412.1 411 52.8
EL10Ac5g12011 Beta vulgaris HOM05D004519 ORTHO05D006283 2.3e-108 396.7 377 52.0
AagrBONN_evm.TU.Sc2ySwM_117.1032 Anthoceros agrestis HOM05D004547 ORTHO05D005133 1.5e-107 394.0 409 50.4
CBR_g4494 Chara braunii HOM05D004519 ORTHO05D006283 9.0e-105 384.8 379 49.9
Eucgr.E01634 Eucalyptus grandis HOM05D004519 ORTHO05D006283 5.0e-103 379.0 249 71.9
Actinidia01317 Actinidia chinensis HOM05D004519 ORTHO05D006283 1.4e-100 370.9 271 66.4
Cpa.g.sc208.3 Carica papaya HOM05D004519 ORTHO05D006283 2.4e-97 360.1 217 75.1
DCAR_004271 Daucus carota HOM05D004519 ORTHO05D006283 5.3e-97 359.0 248 67.3
Atru.chr6.1525 Acer truncatum HOM05D004519 ORTHO05D006283 2.3e-92 343.6 206 77.7
Haze_08160 Corylus avellana HOM05D004519 ORTHO05D006283 8.2e-90 335.1 255 63.9
Cre02.g143000 Chlamydomonas reinhardtii HOM05D004519 ORTHO05D006283 1.2e-80 304.7 363 42.1
PRCOL_00006772 Prasinoderma coloniale HOM05D004519 ORTHO05D006283 2.8e-66 256.9 345 41.7
MCO03G317 Micromonas commoda HOM05D004519 ORTHO05D006283 4.5e-64 249.6 389 39.6
Actinidia29340 Actinidia chinensis HOM05D004519 ORTHO05D006283 7.7e-64 248.8 177 66.1
Hma1.2p1_3246F.1_g334370 Hydrangea macrophylla HOM05D004519 ORTHO05D006283 3.9e-47 193.4 176 56.8
MBI15_g25773_MAGBIO Magnolia biondii HOM05D004519 ORTHO05D006283 9.9e-35 152.1 93 74.2
Eucgr.A01818 Eucalyptus grandis HOM05D004519 ORTHO05D006283 7.1e-33 146.0 82 81.7
Cpa.g.sc208.5 Carica papaya HOM05D004519 ORTHO05D006283 8.6e-31 139.0 97 64.9
HanXRQChr16g0500211 Helianthus annuus HOM05D004519 ORTHO05D006283 6.0e-24 116.3 77 72.7
arahy.Tifrunner.gnm1.ann1.LG4SFI Arachis hypogaea HOM05D000755 ORTHO05D017477 2.4e-20 104.4 110 49.1
Gohir.D08G117301 Gossypium hirsutum HOM05D004519 ORTHO05D017048 1.3e-15 88.6 56 73.2
Gohir.D11G228750 Gossypium hirsutum HOM05D004519 ORTHO05D017048 1.3e-15 88.6 56 73.2
Gohir.D11G251850 Gossypium hirsutum HOM05D004519 ORTHO05D017048 1.3e-15 88.6 56 73.2
Gohir.D13G135501 Gossypium hirsutum HOM05D004519 ORTHO05D017048 3.9e-15 87.0 56 71.4
Haze_20066 Corylus avellana HOM05D004519 ORTHO05D007437 5.1e-15 86.7 95 48.4
Gorai.008G116000 Gossypium raimondii HOM05D004519 ORTHO05D017048 1.5e-14 85.1 55 72.7
PGSC0003DMG401014796 Solanum tuberosum HOM05D004519 ORTHO05D006283 4.3e-14 83.6 85 45.9
RcHm_v2.0_Chr5g0062811 Rosa chinensis HOM05D004519 ORTHO05D017048 1.8e-12 78.2 54 61.1
Actinidia01316 Actinidia chinensis HOM05D004519 ORTHO05D006283 4.5e-11 73.6 62 54.8
Actinidia29341 Actinidia chinensis HOM05D004519 ORTHO05D052920 1.8e-07 61.6 32 78.1
arahy.Tifrunner.gnm1.ann1.18EICQ Arachis hypogaea HOM05D000755 ORTHO05D017477 1.5e-06 58.5 59 49.2
Gohir.D02G161780 Gossypium hirsutum HOM05D004519 ORTHO05D017048 7.4e-06 56.2 36 69.4
Gohir.D10G176966 Gossypium hirsutum HOM05D004519 ORTHO05D017048 7.4e-06 56.2 36 69.4


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