Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb224460 Zea mays HOM05D003626 ORTHO05D004255 6.4e-216 753.8 388 100.0
Zm00001eb095880 Zea mays HOM05D003626 ORTHO05D004255 2.3e-197 692.2 380 94.5
Os09g0570200 Oryza sativa ssp. japonica HOM05D003626 ORTHO05D004255 3.0e-88 329.7 395 53.4
TAR629G0048 Trochodendron aralioides HOM05D003626 ORTHO05D004255 2.6e-44 183.7 338 38.5
Rhsim03G0188200 Rhododendron simsii HOM05D003626 ORTHO05D004255 5.5e-42 176.0 359 36.8
vmacro06655 Vaccinium macrocarpon HOM05D003626 ORTHO05D004255 7.2e-42 175.6 383 35.8
Actinidia25889 Actinidia chinensis HOM05D003626 ORTHO05D000962 3.6e-41 173.3 336 40.5
arahy.Tifrunner.gnm1.ann1.TX8CZR Arachis hypogaea HOM05D003626 ORTHO05D004255 3.6e-41 173.3 371 36.7
A03p56130 Brassica napus HOM05D003626 ORTHO05D004255 8.0e-41 172.2 383 38.1
Manes.06G149800 Manihot esculenta HOM05D003626 ORTHO05D004255 8.0e-41 172.2 396 36.9
Oeu004107.1 Olea europaea HOM05D003626 ORTHO05D004255 1.4e-40 171.4 388 33.5
Thecc.03G180000 Theobroma cacao HOM05D003626 ORTHO05D004255 1.8e-40 171.0 346 36.4
arahy.Tifrunner.gnm1.ann1.DJI5YQ Arachis hypogaea HOM05D003626 ORTHO05D004255 2.3e-40 170.6 376 35.1
Lj1C1001T6 Lonicera japonica HOM05D003626 ORTHO05D004255 6.8e-40 169.1 342 33.9
Prupe.2G297500 Prunus persica HOM05D003626 ORTHO05D004255 6.8e-40 169.1 404 35.6
TAR636G1367 Trochodendron aralioides HOM05D003626 ORTHO05D004255 8.8e-40 168.7 143 59.4
RcHm_v2.0_Chr1g0377821 Rosa chinensis HOM05D003626 ORTHO05D004255 1.2e-39 168.3 384 36.5
DCAR_020260 Daucus carota HOM05D003626 ORTHO05D004255 3.4e-39 166.8 392 33.7
PSO782G4415 Papaver somniferum HOM05D003626 ORTHO05D004255 4.4e-39 166.4 169 53.8
GSVIVG01028908001 Vitis vinifera HOM05D003626 ORTHO05D004255 4.4e-39 166.4 363 34.4
PSO478G3353 Papaver somniferum HOM05D003626 ORTHO05D004255 7.5e-39 165.6 174 52.3
Hma1.2p1_0227F.1_g095920 Hydrangea macrophylla HOM05D003626 ORTHO05D004255 9.8e-39 165.2 141 61.7
ATR0680G428 Amborella trichopoda HOM05D003626 ORTHO05D004255 2.2e-38 164.1 145 59.3
Dinv35227 Davidia involucrata HOM05D003626 ORTHO05D004255 2.2e-38 164.1 330 35.8
Ah.07g206910 Amaranthus hybridus HOM05D003626 ORTHO05D004255 4.8e-38 162.9 199 47.7
Gorai.004G117900 Gossypium raimondii HOM05D003626 ORTHO05D004255 6.3e-38 162.5 176 53.4
CiPaw.05G264100 Carya illinoinensis HOM05D003626 ORTHO05D004255 8.3e-38 162.2 328 39.0
DCAR_029574 Daucus carota HOM05D003626 ORTHO05D004255 8.3e-38 162.2 169 54.4
Aqoxy7G00296 Aquilegia oxysepala HOM05D003626 ORTHO05D004255 1.1e-37 161.8 187 49.7
Dinv28414 Davidia involucrata HOM05D003626 ORTHO05D004255 1.1e-37 161.8 340 38.2
Gohir.D08G110300 Gossypium hirsutum HOM05D003626 ORTHO05D004255 1.1e-37 161.8 142 61.3
Nitab4.5_0000080g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 1.4e-37 161.4 185 49.7
Cpa.g.sc107.76 Carica papaya HOM05D003626 ORTHO05D004255 4.1e-37 159.8 246 45.5
ECA233G2749 Erigeron canadensis HOM05D003626 ORTHO05D004255 9.1e-37 158.7 175 51.4
Gohir.A08G098700 Gossypium hirsutum HOM05D003626 ORTHO05D004255 9.1e-37 158.7 142 60.6
Nn1g01542 Nelumbo nucifera HOM05D003626 ORTHO05D004255 9.1e-37 158.7 131 61.1
Nn6g33408 Nelumbo nucifera HOM05D003626 ORTHO05D004255 9.1e-37 158.7 346 35.0
HanXRQChr14g0462361 Helianthus annuus HOM05D003626 ORTHO05D004255 1.2e-36 158.3 149 56.4
Lsat_1_v5_gn_9_55160 Lactuca sativa HOM05D003626 ORTHO05D004255 2.0e-36 157.5 179 50.3
Manes.14G024700 Manihot esculenta HOM05D003626 ORTHO05D004255 2.0e-36 157.5 131 63.4
Nitab4.5_0001951g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 3.5e-36 156.8 332 34.3
Glyma.10G233400 Glycine max HOM05D003626 ORTHO05D004255 5.9e-36 156.0 149 55.7
Phvul.007G072400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 5.9e-36 156.0 149 56.4
TAR375G0013 Trochodendron aralioides HOM05D003626 ORTHO05D004255 5.9e-36 156.0 186 48.4
CAN.G1175.16 Capsicum annuum HOM05D003626 ORTHO05D004255 1.0e-35 155.2 212 44.8
CDE02G1538 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 1.0e-35 155.2 337 34.7
Medtr1g100810 Medicago truncatula HOM05D003626 ORTHO05D004255 1.0e-35 155.2 147 57.1
TWI23G0117 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 1.0e-35 155.2 341 37.5
VMungo0720G1546 Vigna mungo HOM05D003626 ORTHO05D004255 1.3e-35 154.8 139 59.7
BraA03t14686Z Brassica rapa HOM05D003626 ORTHO05D004255 2.2e-35 154.1 389 36.5
COL.COLO4_28044 Corchorus olitorius HOM05D003626 ORTHO05D004255 2.2e-35 154.1 184 48.4
MD07G1273500 Malus domestica HOM05D003626 ORTHO05D004255 2.2e-35 154.1 331 36.3
CsaV3_3G017260 Cucumis sativus L. HOM05D003626 ORTHO05D004255 3.8e-35 153.3 131 61.1
Psat6g197120 Pisum sativum HOM05D003626 ORTHO05D004255 3.8e-35 153.3 147 55.8
BolC7t45931H Brassica oleracea HOM05D003626 ORTHO05D004255 6.5e-35 152.5 382 34.0
Duzib205G1576 Durio zibethinus HOM05D003626 ORTHO05D004255 6.5e-35 152.5 142 59.9
Potri.012G143200 Populus trichocarpa HOM05D003626 ORTHO05D004255 8.5e-35 152.1 390 35.9
Sed0000543 Sechium edule HOM05D003626 ORTHO05D004255 8.5e-35 152.1 131 61.1
C07p54460 Brassica napus HOM05D003626 ORTHO05D004255 1.5e-34 151.4 383 34.5
FAN03G0953 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.5e-34 151.4 386 34.2
Gohir.A12G256000 Gossypium hirsutum HOM05D003626 ORTHO05D004255 1.5e-34 151.4 395 33.2
HPP92_001476 Vanilla planifolia HOM05D003626 ORTHO05D004255 1.9e-34 151.0 204 44.6
MELO3C006924.2 Cucumis melo HOM05D003626 ORTHO05D004255 2.5e-34 150.6 131 60.3
Potri.015G146300 Populus trichocarpa HOM05D003626 ORTHO05D004255 2.5e-34 150.6 386 36.5
Nitab4.5_0004439g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 3.2e-34 150.2 196 44.9
Sabra15G0155500 Salix brachista HOM05D003626 ORTHO05D004255 4.2e-34 149.8 156 57.1
EL10Ac3g05599 Beta vulgaris HOM05D003626 ORTHO05D004255 5.5e-34 149.4 343 33.8
Duzib068G0520 Durio zibethinus HOM05D003626 ORTHO05D004255 7.2e-34 149.1 127 61.4
Sopen06g011810 Solanum pennellii HOM05D003626 ORTHO05D004255 7.2e-34 149.1 145 56.6
TWI39G1025 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 7.2e-34 149.1 341 36.4
TWI14G0197 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 9.4e-34 148.7 392 34.2
MD01G1205100 Malus domestica HOM05D003626 ORTHO05D004255 1.2e-33 148.3 385 33.5
Solyc03g025440.3 Solanum lycopersicum HOM05D003626 ORTHO05D004255 1.2e-33 148.3 173 51.4
Sopen03g004280 Solanum pennellii HOM05D003626 ORTHO05D004255 1.2e-33 148.3 173 51.4
Gorai.008G275600 Gossypium raimondii HOM05D003626 ORTHO05D004255 1.6e-33 147.9 395 32.9
Peaxi162Scf00444g00425 Petunia axillaris HOM05D003626 ORTHO05D004255 1.6e-33 147.9 337 33.2
Peaxi162Scf00848g00116 Petunia axillaris HOM05D003626 ORTHO05D004255 1.6e-33 147.9 152 53.3
Lj5g0006318 Lotus japonicus HOM05D003626 ORTHO05D004255 2.1e-33 147.5 148 54.7
Lalb_Chr19g0130741 Lupinus albus HOM05D003626 ORTHO05D004255 2.1e-33 147.5 331 34.7
Nitab4.5_0000084g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 2.1e-33 147.5 195 46.2
Cc02_g02700 Coffea canephora HOM05D003626 ORTHO05D004255 2.7e-33 147.1 216 44.0
Duzib084G0771 Durio zibethinus HOM05D003626 ORTHO05D004255 2.7e-33 147.1 247 41.7
Glyma.20G161000 Glycine max HOM05D003626 ORTHO05D004255 3.6e-33 146.7 379 33.2
Solyc06g036060.4 Solanum lycopersicum HOM05D003626 ORTHO05D004255 3.6e-33 146.7 152 53.9
Gohir.D12G257400 Gossypium hirsutum HOM05D003626 ORTHO05D004255 4.7e-33 146.4 418 32.3
PGSC0003DMG400015791 Solanum tuberosum HOM05D003626 ORTHO05D004255 6.1e-33 146.0 173 50.9
TPR.G26995 Trifolium pratense HOM05D003626 ORTHO05D004255 2.3e-32 144.1 149 56.4
FvH4_7g29860 Fragaria vesca HOM05D003626 ORTHO05D004255 3.0e-32 143.7 384 33.1
arahy.Tifrunner.gnm1.ann1.26FV7C Arachis hypogaea HOM05D003626 ORTHO05D004255 4.0e-32 143.3 135 56.3
arahy.Tifrunner.gnm1.ann1.7Y9ZSE Arachis hypogaea HOM05D003626 ORTHO05D004255 4.0e-32 143.3 135 56.3
CDE06G1616 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 4.0e-32 143.3 281 34.5
FAN06G2167 Fragaria x ananassa HOM05D003626 ORTHO05D004255 4.0e-32 143.3 375 33.6
Lalb_Chr03g0034731 Lupinus albus HOM05D003626 ORTHO05D004255 4.0e-32 143.3 136 58.8
Ciclev10006582m.g Citrus clementina HOM05D003626 ORTHO05D004255 5.2e-32 142.9 121 61.2
Lalb_Chr02g0141141 Lupinus albus HOM05D003626 ORTHO05D004255 5.2e-32 142.9 146 52.7
BcaC06g32796 Brassica carinata HOM05D003626 ORTHO05D004255 2.0e-31 141.0 390 31.0
CSS0037833 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 2.0e-31 141.0 126 57.1
SalBow4G0890 Salvia bowleyana HOM05D003626 ORTHO05D004255 2.6e-31 140.6 334 36.8
THA.LOC104811971 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 5.7e-31 139.4 108 65.7
Cfa016262 Carpinus fangiana HOM05D003626 ORTHO05D004255 7.5e-31 139.0 326 34.4
Haze_00014 Corylus avellana HOM05D003626 ORTHO05D004255 7.5e-31 139.0 372 32.8
PGR142G2556 Punica granatum HOM05D003626 ORTHO05D004255 1.7e-30 137.9 174 47.1
Carub.0007s1537 Capsella rubella HOM05D003626 ORTHO05D004255 2.2e-30 137.5 113 61.1
Hund04768 Selenicereus undatus HOM05D003626 ORTHO05D004255 3.7e-30 136.7 132 55.3
Sc19g0001390 Simmondsia chinensis HOM05D003626 ORTHO05D004255 4.9e-30 136.3 396 31.3
A01p16870 Brassica napus HOM05D003626 ORTHO05D004255 6.3e-30 136.0 398 31.9
Glyma.16G181700 Glycine max HOM05D003626 ORTHO05D004255 8.3e-30 135.6 336 34.2
TPR.G8172 Trifolium pratense HOM05D003626 ORTHO05D004255 8.3e-30 135.6 144 54.9
CARHR233030 Cardamine hirsuta HOM05D003626 ORTHO05D004255 1.1e-29 135.2 108 62.0
PGR042G2663 Punica granatum HOM05D003626 ORTHO05D004255 2.4e-29 134.0 386 32.6
MSTRG.82 Avicennia marina HOM05D003626 ORTHO05D004255 3.1e-29 133.7 332 33.4
Aa31LG3G8800 Aethionema arabicum HOM05D003626 ORTHO05D004255 4.1e-29 133.3 406 33.0
C01p21150 Brassica napus HOM05D003626 ORTHO05D004255 5.4e-29 132.9 395 30.4
CANSAT21G2257 Cannabis sativa HOM05D003626 ORTHO05D004255 5.4e-29 132.9 125 58.4
Atru.chr1.420 Acer truncatum HOM05D003626 ORTHO05D004255 7.0e-29 132.5 117 59.8
BcaNung03703 Brassica carinata HOM05D003626 ORTHO05D004255 7.0e-29 132.5 107 62.6
Lj2g0008392 Lotus japonicus HOM05D003626 ORTHO05D004255 1.2e-28 131.7 130 58.5
BcaC09g50754 Brassica carinata HOM05D003626 ORTHO05D004255 1.6e-28 131.3 107 60.7
unitig_22.g5223 Utricularia gibba HOM05D003626 ORTHO05D004255 2.0e-28 131.0 152 50.7
THA.LOC104825103 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 2.7e-28 130.6 382 31.4
Eucgr.E00978 Eucalyptus grandis HOM05D003626 ORTHO05D004255 3.5e-28 130.2 149 51.0
Eucgr.A02765 Eucalyptus grandis HOM05D003626 ORTHO05D004255 1.3e-27 128.3 205 41.0
Eucgr.L00411 Eucalyptus grandis HOM05D003626 ORTHO05D004255 1.3e-27 128.3 149 50.3
Phvul.004G113400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 1.3e-27 128.3 326 34.0
HPP92_011473 Vanilla planifolia HOM05D003626 ORTHO05D004255 1.3e-27 128.3 153 51.0
Oeu061653.1 Olea europaea HOM05D003626 ORTHO05D004255 1.7e-27 127.9 166 45.8
SGA_v2.0_scaffold60G21078 Striga asiatica HOM05D003626 ORTHO05D004255 1.7e-27 127.9 149 49.7
AUR62021157 Chenopodium quinoa HOM05D003626 ORTHO05D004255 2.3e-27 127.5 108 57.4
Migut.F01102 Erythranthe guttata HOM05D003626 ORTHO05D004255 5.0e-27 126.3 111 57.7
Thhalv10024755m.g Eutrema salsugineum HOM05D003626 ORTHO05D004255 5.0e-27 126.3 395 29.1
Sp7g23640 Schrenkiella parvula HOM05D003626 ORTHO05D004255 5.0e-27 126.3 394 30.5
Medtr6g053660 Medicago truncatula HOM05D003626 ORTHO05D004255 6.6e-27 125.9 123 56.9
AT4G25610 Arabidopsis thaliana HOM05D003626 ORTHO05D004255 1.1e-26 125.2 392 29.3
Psat0s4127g0040 Pisum sativum HOM05D003626 ORTHO05D004255 1.1e-26 125.2 223 41.7
MSTRG.27103 Avicennia marina HOM05D003626 ORTHO05D004255 1.9e-26 124.4 342 32.5
Ca_10741_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 3.3e-26 123.6 147 48.3
SEGI_20458 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 5.5e-26 122.9 121 52.9
ECA238G3668 Erigeron canadensis HOM05D003626 ORTHO05D004255 2.1e-25 120.9 139 48.2
AUR62015951 Chenopodium quinoa HOM05D003626 ORTHO05D004255 2.8e-25 120.6 193 40.9
SMO347G0135 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 2.8e-25 120.6 136 47.8
Lalb_Chr06g0161221 Lupinus albus HOM05D003626 ORTHO05D004255 3.6e-25 120.2 322 31.4
AL7G27480 Arabidopsis lyrata HOM05D003626 ORTHO05D004255 4.7e-25 119.8 375 29.3
FAN10G0313 Fragaria x ananassa HOM05D003626 ORTHO05D004255 4.7e-25 119.8 384 31.5
ClCG05G008170 Citrullus lanatus HOM05D003626 ORTHO05D004255 6.1e-25 119.4 125 52.0
FAN10G2476 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.0e-24 118.6 386 31.1
VMungo0464G2114 Vigna mungo HOM05D003626 ORTHO05D002946 1.4e-24 118.2 134 50.7
unitig_0.g459 Utricularia gibba HOM05D003626 ORTHO05D004255 1.8e-24 117.9 134 52.2
Mapoly0003s0245 Marchantia polymorpha HOM05D003626 ORTHO05D004255 6.8e-24 115.9 204 37.7
FAN03G3125 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.2e-23 115.2 386 31.3
Sabra12G0107600 Salix brachista HOM05D003626 ORTHO05D004255 9.8e-23 112.1 357 31.9
FAN01G0376 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.7e-22 111.3 396 31.1
Sc13g0008850 Simmondsia chinensis HOM05D003626 ORTHO05D004255 4.9e-22 109.8 173 38.7
Migut.F00325 Erythranthe guttata HOM05D003626 ORTHO05D004255 6.3e-22 109.4 358 31.3
FAN06G1666 Fragaria x ananassa HOM05D003626 ORTHO05D004255 2.4e-21 107.5 127 51.2
SEGI_03018 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 2.3e-19 100.9 95 52.6
Glyma.09G136202 Glycine max HOM05D003626 ORTHO05D004255 3.6e-17 93.6 85 61.2
Sed0014313 Sechium edule HOM05D003626 ORTHO05D004255 3.4e-15 87.0 140 42.1
Lalb_Chr21g0305131 Lupinus albus HOM05D003626 ORTHO05D004255 3.2e-13 80.5 95 50.5
Pp3c10_4090 Physcomitrium patens HOM05D003626 ORTHO05D004255 6.0e-12 76.3 166 33.7
AagrBONN_evm.TU.Sc2ySwM_344.1743 Anthoceros agrestis HOM05D003626 ORTHO05D004255 6.6e-11 72.8 184 29.3
Pp3c10_4110 Physcomitrium patens HOM05D003626 ORTHO05D004255 4.4e-07 60.1 152 31.6
HPP92_001484 Vanilla planifolia HOM05D003626 ORTHO05D004255 2.9e-06 57.4 57 52.6
SMO356G0700 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 8.3e-06 55.8 119 37.0


User provided reference genes

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