Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb224320 Zea mays HOM05D006364 ORTHO05D007968 3.3e-89 331.6 165 100.0
Zm00001eb418900 Zea mays HOM05D006364 ORTHO05D007968 3.0e-29 132.5 67 97.0
Zm00001eb028690 Zea mays HOM05D006364 ORTHO05D007968 3.9e-29 132.1 65 98.5
Os12g0566100 Oryza sativa ssp. japonica HOM05D006364 ORTHO05D007968 8.1e-27 124.4 67 88.1
Psat1g163400 Pisum sativum HOM05D006364 ORTHO05D007968 1.8e-26 123.2 65 90.8
Eucgr.H04093 Eucalyptus grandis HOM05D006364 ORTHO05D007968 3.1e-26 122.5 65 87.7
Lj7E712T1 Lonicera japonica HOM05D006364 ORTHO05D007968 3.1e-26 122.5 65 87.7
Glyma.09G031500 Glycine max HOM05D006364 ORTHO05D007968 9.0e-26 120.9 65 87.7
Medtr2g032700 Medicago truncatula HOM05D006364 ORTHO05D007968 1.5e-25 120.2 65 84.6
QL06p013601 Quercus lobata HOM05D006364 ORTHO05D007968 1.5e-25 120.2 65 86.2
GSVIVG01017645001 Vitis vinifera HOM05D006364 ORTHO05D007968 1.5e-25 120.2 65 86.2
CANSAT78G0762 Cannabis sativa HOM05D006364 ORTHO05D007968 2.0e-25 119.8 65 86.2
CiPaw.01G113600 Carya illinoinensis HOM05D006364 ORTHO05D007968 2.0e-25 119.8 65 86.2
Gohir.A02G086100 Gossypium hirsutum HOM05D006364 ORTHO05D007968 2.6e-25 119.4 65 86.2
Gohir.D02G062300 Gossypium hirsutum HOM05D006364 ORTHO05D007968 2.6e-25 119.4 65 86.2
Gorai.005G070100 Gossypium raimondii HOM05D006364 ORTHO05D007968 2.6e-25 119.4 65 86.2
HanXRQChr09g0252081 Helianthus annuus HOM05D006364 ORTHO05D007968 3.4e-25 119.0 65 84.6
HPP92_017027 Vanilla planifolia HOM05D006364 ORTHO05D007968 3.4e-25 119.0 66 83.3
Cc03_g00390 Coffea canephora HOM05D006364 ORTHO05D007968 4.5e-25 118.6 65 83.1
Duzib212G0576 Durio zibethinus HOM05D006364 ORTHO05D007968 5.8e-25 118.2 65 84.6
Glyma.15G136600 Glycine max HOM05D006364 ORTHO05D007968 9.9e-25 117.5 65 86.2
Thecc.04G308800 Theobroma cacao HOM05D006364 ORTHO05D007968 9.9e-25 117.5 65 84.6
CDE11G0289 Ceratophyllum demersum HOM05D006364 ORTHO05D007968 1.3e-24 117.1 65 81.5
Nn3g21850 Nelumbo nucifera HOM05D006364 ORTHO05D007968 1.3e-24 117.1 65 83.1
Potri.010G152100 Populus trichocarpa HOM05D006364 ORTHO05D007968 1.3e-24 117.1 65 84.6
RcHm_v2.0_Chr4g0426541 Rosa chinensis HOM05D006364 ORTHO05D007968 1.3e-24 117.1 65 81.5
arahy.Tifrunner.gnm1.ann1.28BCJ9 Arachis hypogaea HOM05D006364 ORTHO05D007968 1.7e-24 116.7 65 83.1
arahy.Tifrunner.gnm1.ann1.8W9CKH Arachis hypogaea HOM05D006364 ORTHO05D007968 1.7e-24 116.7 65 83.1
arahy.Tifrunner.gnm1.ann1.ZVI86Q Arachis hypogaea HOM05D006364 ORTHO05D007968 1.7e-24 116.7 65 83.1
Cpa.g.sc146.52 Carica papaya HOM05D006364 ORTHO05D007968 1.7e-24 116.7 65 83.1
Sed0012877 Sechium edule HOM05D006364 ORTHO05D007968 1.7e-24 116.7 65 83.1
THA.LOC104820323 Tarenaya hassleriana HOM05D006364 ORTHO05D007968 1.7e-24 116.7 65 83.1
TPR.G30811 Trifolium pratense HOM05D006364 ORTHO05D007968 1.7e-24 116.7 65 86.2
Actinidia02518 Actinidia chinensis HOM05D006364 ORTHO05D007968 2.9e-24 115.9 65 83.1
EL10Ac1g00595 Beta vulgaris HOM05D006364 ORTHO05D007968 2.9e-24 115.9 65 83.1
Lalb_Chr18g0058441 Lupinus albus HOM05D006364 ORTHO05D007968 2.9e-24 115.9 65 84.6
Haze_00814 Corylus avellana HOM05D006364 ORTHO05D007968 3.8e-24 115.5 65 86.2
CsaV3_3G015430 Cucumis sativus L. HOM05D006364 ORTHO05D007968 3.8e-24 115.5 65 80.0
Solyc04g071180.3 Solanum lycopersicum HOM05D006364 ORTHO05D007968 3.8e-24 115.5 65 83.1
Sopen04g027130 Solanum pennellii HOM05D006364 ORTHO05D007968 3.8e-24 115.5 65 83.1
Duzib151G1172 Durio zibethinus HOM05D006364 ORTHO05D007968 4.9e-24 115.2 64 82.8
TWI73G0896 Tripterygium wilfordii HOM05D006364 ORTHO05D007968 4.9e-24 115.2 65 81.5
Zm00001eb137950 Zea mays HOM05D006364 ORTHO05D007968 4.9e-24 115.2 59 94.9
Dinv15615 Davidia involucrata HOM05D006364 ORTHO05D007968 8.4e-24 114.4 65 83.1
Nitab4.5_0000152g0370 Nicotiana tabacum HOM05D006364 ORTHO05D007968 8.4e-24 114.4 65 81.5
Nitab4.5_0003130g0060 Nicotiana tabacum HOM05D006364 ORTHO05D007968 8.4e-24 114.4 65 81.5
MSTRG.26303 Avicennia marina HOM05D006364 ORTHO05D007968 1.1e-23 114.0 65 81.5
COL.COLO4_34533 Corchorus olitorius HOM05D006364 ORTHO05D007968 1.4e-23 113.6 65 81.5
Potri.008G100400 Populus trichocarpa HOM05D006364 ORTHO05D007968 1.4e-23 113.6 63 82.5
ECA246G0645 Erigeron canadensis HOM05D006364 ORTHO05D007968 1.9e-23 113.2 65 80.0
Peaxi162Scf00126g01328 Petunia axillaris HOM05D006364 ORTHO05D007968 2.4e-23 112.8 65 81.5
Prupe.1G110000 Prunus persica HOM05D006364 ORTHO05D007968 2.4e-23 112.8 65 80.0
CSS0027206 Camellia sinensis var. sinensis HOM05D006364 ORTHO05D007968 3.2e-23 112.5 65 81.5
FvH4_4g21000 Fragaria vesca HOM05D006364 ORTHO05D007968 3.2e-23 112.5 65 78.5
FAN12G1354 Fragaria x ananassa HOM05D000037 ORTHO05D001684 3.2e-23 112.5 65 78.5
Hund19242 Selenicereus undatus HOM05D006364 ORTHO05D007968 3.2e-23 112.5 65 80.0
CAN.G689.14 Capsicum annuum HOM05D006364 ORTHO05D007968 4.2e-23 112.1 65 81.5
Phvul.006G121400 Phaseolus vulgaris HOM05D006364 ORTHO05D007968 4.2e-23 112.1 65 83.1
MELO3C006742.2 Cucumis melo HOM05D006364 ORTHO05D007968 5.4e-23 111.7 65 76.9
Rhsim04G0245400 Rhododendron simsii HOM05D006364 ORTHO05D007968 5.4e-23 111.7 65 78.5
CAN.G175.13 Capsicum annuum HOM05D006364 ORTHO05D007968 7.1e-23 111.3 65 80.0
Lj6g0013185 Lotus japonicus HOM05D006364 ORTHO05D007968 7.1e-23 111.3 65 83.1
PGSC0003DMG400008613 Solanum tuberosum HOM05D006364 ORTHO05D007968 7.1e-23 111.3 65 78.5
Migut.B01021 Erythranthe guttata HOM05D006364 ORTHO05D007968 1.2e-22 110.5 65 78.5
Migut.N00017 Erythranthe guttata HOM05D006364 ORTHO05D007968 1.2e-22 110.5 65 78.5
Rhsim02G0000900 Rhododendron simsii HOM05D006364 ORTHO05D007968 1.2e-22 110.5 65 76.9
Hma1.2p1_0013F.1_g008050 Hydrangea macrophylla HOM05D006364 ORTHO05D007968 2.1e-22 109.8 65 80.0
Actinidia31587 Actinidia chinensis HOM05D006364 ORTHO05D007968 2.7e-22 109.4 65 80.0
Sp3g15490 Schrenkiella parvula HOM05D006364 ORTHO05D007968 2.7e-22 109.4 65 78.5
BcaB04g18937 Brassica carinata HOM05D006364 ORTHO05D007968 4.6e-22 108.6 65 78.5
BcaB04g20848 Brassica carinata HOM05D006364 ORTHO05D007968 4.6e-22 108.6 65 78.5
A03p40140 Brassica napus HOM05D006364 ORTHO05D007968 4.6e-22 108.6 65 78.5
BraA03t13164Z Brassica rapa HOM05D006364 ORTHO05D007968 4.6e-22 108.6 65 78.5
MD16G1140400 Malus domestica HOM05D006364 ORTHO05D007968 4.6e-22 108.6 65 75.4
PGR004G1259 Punica granatum HOM05D006364 ORTHO05D007968 4.6e-22 108.6 65 75.4
CSS0032087 Camellia sinensis var. sinensis HOM05D006364 ORTHO05D007968 6.0e-22 108.2 65 80.0
Lalb_Chr20g0120331 Lupinus albus HOM05D006364 ORTHO05D007968 6.0e-22 108.2 64 81.2
Aqoxy2G02602 Aquilegia oxysepala HOM05D006364 ORTHO05D007968 1.0e-21 107.5 69 73.9
BcaC01g03770 Brassica carinata HOM05D006364 ORTHO05D007968 1.0e-21 107.5 65 76.9
BcaC01g03776 Brassica carinata HOM05D006364 ORTHO05D007968 1.8e-21 106.7 65 76.9
C03p48710 Brassica napus HOM05D006364 ORTHO05D007968 1.8e-21 106.7 65 76.9
C03p48760 Brassica napus HOM05D006364 ORTHO05D007968 1.8e-21 106.7 65 76.9
BolC3t17152H Brassica oleracea HOM05D006364 ORTHO05D007968 1.8e-21 106.7 65 76.9
DCAR_026961 Daucus carota HOM05D006364 ORTHO05D007968 1.8e-21 106.7 65 73.8
Thhalv10021841m.g Eutrema salsugineum HOM05D006364 ORTHO05D007968 1.8e-21 106.7 65 76.9
Aa31LG8G4220 Aethionema arabicum HOM05D006364 ORTHO05D007968 2.3e-21 106.3 65 73.8
BcaC09g48691 Brassica carinata HOM05D006364 ORTHO05D007968 2.3e-21 106.3 65 76.9
C01p46890 Brassica napus HOM05D006364 ORTHO05D007968 2.3e-21 106.3 65 76.9
BolC1t04661H Brassica oleracea HOM05D006364 ORTHO05D007968 2.3e-21 106.3 65 76.9
AL3G30350 Arabidopsis lyrata HOM05D006364 ORTHO05D007968 3.0e-21 105.9 65 76.9
AT3G17300 Arabidopsis thaliana HOM05D006364 ORTHO05D007968 3.0e-21 105.9 65 76.9
Carub.0003s1701 Capsella rubella HOM05D006364 ORTHO05D007968 3.0e-21 105.9 65 76.9
ClCG05G006780 Citrullus lanatus HOM05D006364 ORTHO05D007968 3.9e-21 105.5 91 61.5
MBI18_g09661_MAGBIO Magnolia biondii HOM05D006364 ORTHO05D007968 8.7e-21 104.4 56 87.5
TWI09G0430 Tripterygium wilfordii HOM05D006364 ORTHO05D007968 1.1e-20 104.0 66 77.3
AUR62014465 Chenopodium quinoa HOM05D000862 ORTHO05D000943 3.3e-20 102.4 61 77.0
AUR62034532 Chenopodium quinoa HOM05D000862 ORTHO05D000943 3.3e-20 102.4 61 77.0
CARHR092600 Cardamine hirsuta HOM05D006364 ORTHO05D007968 4.3e-20 102.1 65 73.8
SalBow6G4934 Salvia bowleyana HOM05D006364 ORTHO05D007968 4.3e-20 102.1 75 69.3
unitig_22.g5765 Utricularia gibba HOM05D006364 ORTHO05D007968 4.3e-20 102.1 65 73.8
A01p37010 Brassica napus HOM05D006364 ORTHO05D007968 7.4e-20 101.3 63 76.2
BraA01t03762Z Brassica rapa HOM05D006364 ORTHO05D007968 7.4e-20 101.3 63 76.2
PSO210G6302 Papaver somniferum HOM05D006364 ORTHO05D007968 1.3e-19 100.5 65 75.4
PSO761G0417 Papaver somniferum HOM05D006364 ORTHO05D007968 1.3e-19 100.5 65 75.4
SalBow4G1453 Salvia bowleyana HOM05D006364 ORTHO05D007968 3.6e-19 99.0 56 80.4
EL10Ac3g06351 Beta vulgaris HOM05D006364 ORTHO05D007968 2.4e-18 96.3 56 76.8
SHI21779 Sapria himalayana HOM05D006364 ORTHO05D007968 3.1e-18 95.9 59 74.6
Manes.03G210000 Manihot esculenta HOM05D006364 ORTHO05D007968 6.9e-18 94.7 65 73.8
AUR62036805 Chenopodium quinoa HOM05D000862 ORTHO05D000943 6.4e-16 88.2 65 66.2
Sed0013937 Sechium edule HOM05D006364 ORTHO05D007968 1.8e-13 80.1 43 86.0
Lsat_1_v5_gn_6_117381 Lactuca sativa HOM05D006364 ORTHO05D007968 2.5e-12 76.3 61 57.4
Ah.05g176740 Amaranthus hybridus HOM05D006364 ORTHO05D007968 3.3e-12 75.9 43 83.7
BraA01t03642Z Brassica rapa HOM05D006364 ORTHO05D007968 4.3e-12 75.5 68 57.4
Zm00001eb193610 Zea mays HOM05D006364 ORTHO05D007968 4.3e-12 75.5 47 83.0
Pp3c26_11720 Physcomitrium patens HOM05D006364 ORTHO05D007968 5.6e-12 75.1 72 48.6
vmacro07987 Vaccinium macrocarpon HOM05D006364 ORTHO05D007968 9.6e-12 74.3 103 42.7
A01p35610 Brassica napus HOM05D006364 ORTHO05D007968 6.2e-11 71.6 68 54.4
Dinv29542 Davidia involucrata HOM05D006364 ORTHO05D007968 6.2e-11 71.6 43 76.7
Sc07g0002970 Simmondsia chinensis HOM05D006364 ORTHO05D007968 6.2e-11 71.6 43 76.7
SMO196G0146 Selaginella moellendorffii HOM05D006364 ORTHO05D007968 3.1e-10 69.3 63 50.8
AagrBONN_evm.TU.Sc2ySwM_368.2196 Anthoceros agrestis HOM05D006364 ORTHO05D007968 2.0e-09 66.6 63 49.2
SalBow3G2548 Salvia bowleyana HOM05D006364 ORTHO05D007968 4.5e-09 65.5 52 55.8
Cfa015704 Carpinus fangiana HOM05D006364 ORTHO05D007968 7.1e-07 58.2 34 82.4
Hund17201 Selenicereus undatus HOM05D000862 ORTHO05D000943 9.3e-07 57.8 34 79.4
SGA_v2.0_scaffold449G51796 Striga asiatica HOM05D006364 ORTHO05D007968 2.1e-06 56.6 65 49.2
Actinidia07522 Actinidia chinensis HOM05D006364 ORTHO05D007968 4.6e-06 55.5 46 58.7


User provided reference genes

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