Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb221580 Zea mays HOM05D006634 ORTHO05D008282 1.4e-66 256.1 131 100.0
Zm00001eb045570 Zea mays HOM05D006634 ORTHO05D008282 1.1e-37 160.2 84 95.2
Os10g0481400 Oryza sativa ssp. japonica HOM05D006634 ORTHO05D008282 1.8e-29 132.9 89 77.5
SalBow3G1265 Salvia bowleyana HOM05D006634 ORTHO05D008282 7.1e-18 94.4 85 60.0
GSVIVG01025186001 Vitis vinifera HOM05D006634 ORTHO05D008282 6.7e-16 87.8 88 54.5
CSS0041274 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 8.7e-16 87.4 86 58.1
arahy.Tifrunner.gnm1.ann1.RYN47D Arachis hypogaea HOM05D006634 ORTHO05D008282 1.1e-15 87.0 84 56.0
TWI79G0418 Tripterygium wilfordii HOM05D006634 ORTHO05D008282 2.5e-15 85.9 87 56.3
Eucgr.B02497 Eucalyptus grandis HOM05D006634 ORTHO05D008282 3.3e-15 85.5 89 53.9
CiPaw.13G113000 Carya illinoinensis HOM05D006634 ORTHO05D008282 4.3e-15 85.1 88 51.1
CDE06G1545 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 4.3e-15 85.1 85 56.5
Lalb_Chr19g0137281 Lupinus albus HOM05D006634 ORTHO05D008282 4.3e-15 85.1 84 53.6
Dinv32744 Davidia involucrata HOM05D006634 ORTHO05D008282 5.7e-15 84.7 88 52.3
Glyma.11G146700 Glycine max HOM05D006634 ORTHO05D008282 9.6e-15 84.0 84 57.1
CANSAT54G0497 Cannabis sativa HOM05D006634 ORTHO05D008282 1.3e-14 83.6 87 52.9
CANSAT54G1359 Cannabis sativa HOM05D006634 ORTHO05D008282 1.3e-14 83.6 87 52.9
CANSAT54G1657 Cannabis sativa HOM05D006634 ORTHO05D008282 1.3e-14 83.6 87 52.9
CANSAT54G2640 Cannabis sativa HOM05D006634 ORTHO05D008282 1.3e-14 83.6 87 52.9
CANSAT54G2841 Cannabis sativa HOM05D006634 ORTHO05D008282 1.3e-14 83.6 87 52.9
CANSAT54G0287 Cannabis sativa HOM05D006634 ORTHO05D008282 1.6e-14 83.2 86 51.2
CANSAT54G1094 Cannabis sativa HOM05D006634 ORTHO05D008282 1.6e-14 83.2 86 51.2
MD11G1136000 Malus domestica HOM05D006634 ORTHO05D008282 1.6e-14 83.2 84 54.8
Aqoxy2G01632 Aquilegia oxysepala HOM05D006634 ORTHO05D008282 3.7e-14 82.0 85 48.2
Hma1.2p1_0058F.1_g032540 Hydrangea macrophylla HOM05D006634 ORTHO05D008282 3.7e-14 82.0 84 50.0
Lj3g0007397 Lotus japonicus HOM05D006634 ORTHO05D008282 3.7e-14 82.0 84 51.2
Medtr4g459450 Medicago truncatula HOM05D006634 ORTHO05D008282 3.7e-14 82.0 84 52.4
Psat7g225160 Pisum sativum HOM05D006634 ORTHO05D008282 3.7e-14 82.0 84 53.6
TPR.G15540 Trifolium pratense HOM05D006634 ORTHO05D008282 3.7e-14 82.0 84 52.4
arahy.Tifrunner.gnm1.ann1.8AEA4E Arachis hypogaea HOM05D006634 ORTHO05D008282 4.8e-14 81.6 93 51.6
Glyma.12G067600 Glycine max HOM05D006634 ORTHO05D008282 4.8e-14 81.6 83 54.2
Nn2g10789 Nelumbo nucifera HOM05D006634 ORTHO05D008282 4.8e-14 81.6 91 48.4
Peaxi162Scf00270g00818 Petunia axillaris HOM05D006634 ORTHO05D008282 4.8e-14 81.6 89 50.6
Ciclev10029701m.g Citrus clementina HOM05D006634 ORTHO05D008282 6.3e-14 81.3 88 51.1
MD03G1117700 Malus domestica HOM05D006634 ORTHO05D008282 8.2e-14 80.9 84 52.4
ClCG03G001830 Citrullus lanatus HOM05D006634 ORTHO05D008282 1.4e-13 80.1 85 50.6
PGR102G2188 Punica granatum HOM05D006634 ORTHO05D008282 1.4e-13 80.1 86 50.0
RcHm_v2.0_Chr5g0059081 Rosa chinensis HOM05D006634 ORTHO05D008282 1.4e-13 80.1 88 52.3
THA.LOC104800608 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 1.4e-13 80.1 91 49.5
CDE07G0066 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 1.8e-13 79.7 81 54.3
Oeu002870.2 Olea europaea HOM05D006634 ORTHO05D008282 1.8e-13 79.7 88 51.1
CsaV3_1G033740 Cucumis sativus L. HOM05D006634 ORTHO05D008282 2.4e-13 79.3 87 48.3
Nitab4.5_0000650g0190 Nicotiana tabacum HOM05D006634 ORTHO05D008282 2.4e-13 79.3 86 52.3
Rhsim01G0216700 Rhododendron simsii HOM05D006634 ORTHO05D008282 2.4e-13 79.3 84 52.4
Phvul.011G079100 Phaseolus vulgaris HOM05D006634 ORTHO05D008282 3.1e-13 79.0 84 52.4
CANSAT54G1506 Cannabis sativa HOM05D006634 ORTHO05D008282 5.3e-13 78.2 87 50.6
MELO3C020691.2 Cucumis melo HOM05D006634 ORTHO05D008282 5.3e-13 78.2 87 47.1
Solyc11g069410.2 Solanum lycopersicum HOM05D006634 ORTHO05D008282 5.3e-13 78.2 86 52.3
Sopen11g028130 Solanum pennellii HOM05D006634 ORTHO05D008282 5.3e-13 78.2 86 52.3
FAN21G3892 Fragaria x ananassa HOM05D006634 ORTHO05D008282 6.9e-13 77.8 86 47.7
Prupe.6G101400 Prunus persica HOM05D006634 ORTHO05D008282 6.9e-13 77.8 86 52.3
vmacro14436 Vaccinium macrocarpon HOM05D006634 ORTHO05D008282 6.9e-13 77.8 84 51.2
FvH4_3g32290 Fragaria vesca HOM05D006634 ORTHO05D008282 9.0e-13 77.4 86 48.8
FAN11G2087 Fragaria x ananassa HOM05D006634 ORTHO05D008282 9.0e-13 77.4 86 48.8
THA.LOC104826362 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 9.0e-13 77.4 90 50.0
Atru.chr3.3630 Acer truncatum HOM05D006634 ORTHO05D008282 1.5e-12 76.6 88 48.9
BcaNung07072 Brassica carinata HOM05D006634 ORTHO05D008282 1.5e-12 76.6 86 51.2
BolC4t23789H Brassica oleracea HOM05D006634 ORTHO05D008282 1.5e-12 76.6 86 51.2
CSS0031934 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 1.5e-12 76.6 86 48.8
Sed0017465 Sechium edule HOM05D006634 ORTHO05D008282 1.5e-12 76.6 86 48.8
BraA07t29605Z Brassica rapa HOM05D006634 ORTHO05D008282 2.0e-12 76.3 86 51.2
A07p19000 Brassica napus HOM05D006634 ORTHO05D008282 2.6e-12 75.9 86 51.2
C04p22950 Brassica napus HOM05D006634 ORTHO05D008282 2.6e-12 75.9 87 50.6
Actinidia03728 Actinidia chinensis HOM05D006634 ORTHO05D008282 7.6e-12 74.3 86 51.2
AUR62039638 Chenopodium quinoa HOM05D006634 ORTHO05D008282 7.6e-12 74.3 85 49.4
Carub.0004s0938 Capsella rubella HOM05D006634 ORTHO05D008282 1.0e-11 73.9 86 47.7
AL4G21590 Arabidopsis lyrata HOM05D006634 ORTHO05D008282 2.9e-11 72.4 88 47.7
Sp4g11250 Schrenkiella parvula HOM05D006634 ORTHO05D008282 3.8e-11 72.0 86 48.8
Aa31LG5G7790 Aethionema arabicum HOM05D006634 ORTHO05D008282 5.0e-11 71.6 87 50.6
DCAR_018812 Daucus carota HOM05D006634 ORTHO05D008282 5.0e-11 71.6 80 50.0
unitig_21.g20301 Utricularia gibba HOM05D006634 ORTHO05D008282 5.0e-11 71.6 85 48.2
AT2G28430 Arabidopsis thaliana HOM05D006634 ORTHO05D008282 6.5e-11 71.2 86 46.5
AUR62024980 Chenopodium quinoa HOM05D006634 ORTHO05D008282 1.1e-10 70.5 85 48.2
Mapoly0137s0028 Marchantia polymorpha HOM05D006634 ORTHO05D008282 1.1e-10 70.5 92 43.5
HanXRQChr02g0031651 Helianthus annuus HOM05D006634 ORTHO05D008282 1.4e-10 70.1 88 50.0
CARHR121380 Cardamine hirsuta HOM05D006634 ORTHO05D008282 1.9e-10 69.7 86 46.5
ECA238G2380 Erigeron canadensis HOM05D006634 ORTHO05D008282 1.9e-10 69.7 84 45.2
FAN25G2760 Fragaria x ananassa HOM05D006634 ORTHO05D008282 1.9e-10 69.7 85 42.4
Lsat_1_v5_gn_2_98520 Lactuca sativa HOM05D006634 ORTHO05D008282 2.5e-10 69.3 87 47.1
Manes.11G145100 Manihot esculenta HOM05D006634 ORTHO05D008282 2.5e-10 69.3 85 49.4
Sabra04G0142400 Salix brachista HOM05D006634 ORTHO05D008282 2.5e-10 69.3 81 49.4
Thhalv10017488m.g Eutrema salsugineum HOM05D006634 ORTHO05D008282 3.2e-10 68.9 87 46.0
BcaB06g28214 Brassica carinata HOM05D006634 ORTHO05D008282 4.2e-10 68.6 84 46.4
Duzib168G0710 Durio zibethinus HOM05D006634 ORTHO05D008282 4.2e-10 68.6 86 45.3
Gohir.A05G103000 Gossypium hirsutum HOM05D006634 ORTHO05D008282 4.2e-10 68.6 88 45.5
Potri.004G210800 Populus trichocarpa HOM05D006634 ORTHO05D008282 4.2e-10 68.6 80 50.0
Gorai.009G107000 Gossypium raimondii HOM05D006634 ORTHO05D008282 5.5e-10 68.2 86 45.3
Duzib150G1350 Durio zibethinus HOM05D006634 ORTHO05D008282 1.6e-09 66.6 86 46.5
Pp3c7_7440 Physcomitrium patens HOM05D006634 ORTHO05D008282 2.1e-09 66.2 91 38.5
FAN16G1798 Fragaria x ananassa HOM05D006634 ORTHO05D008282 2.7e-09 65.9 79 44.3
HanXRQChr14g0452861 Helianthus annuus HOM05D006634 ORTHO05D008282 2.7e-09 65.9 82 46.3
Gohir.D05G102700 Gossypium hirsutum HOM05D006634 ORTHO05D008282 3.5e-09 65.5 86 44.2
Lalb_Chr03g0027351 Lupinus albus HOM05D006634 ORTHO05D008282 3.5e-09 65.5 75 50.7
Manes.04G021400 Manihot esculenta HOM05D006634 ORTHO05D008282 3.5e-09 65.5 85 47.1
Gohir.D08G215200 Gossypium hirsutum HOM05D006634 ORTHO05D008282 1.0e-08 63.9 85 47.1
Gorai.004G228800 Gossypium raimondii HOM05D006634 ORTHO05D008282 1.0e-08 63.9 85 47.1
Actinidia25419 Actinidia chinensis HOM05D006634 ORTHO05D008282 1.8e-08 63.2 75 45.3
Gohir.A08G197800 Gossypium hirsutum HOM05D006634 ORTHO05D008282 2.3e-08 62.8 85 45.9
Thecc.09G340600 Theobroma cacao HOM05D006634 ORTHO05D008282 2.3e-08 62.8 80 45.0
BolC4t27285H Brassica oleracea HOM05D006634 ORTHO05D008282 1.1e-07 60.5 82 43.9
Cpa.g.sc216.10 Carica papaya HOM05D006634 ORTHO05D008282 1.1e-07 60.5 74 47.3
BraA04t17721Z Brassica rapa HOM05D006634 ORTHO05D008282 3.3e-07 58.9 82 40.2
ECA248G3376 Erigeron canadensis HOM05D006634 ORTHO05D008282 3.3e-07 58.9 84 40.5
Cc01_g11130 Coffea canephora HOM05D006634 ORTHO05D008282 4.3e-07 58.5 68 45.6
Sed0015282 Sechium edule HOM05D006634 ORTHO05D008282 7.4e-07 57.8 84 40.5
QL01p022236 Quercus lobata HOM05D006634 ORTHO05D008282 1.6e-06 56.6 174 28.2


User provided reference genes

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