Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb218450 Zea mays HOM05D006497 ORTHO05D008263 9.2e-75 283.5 146 100.0
Os03g0651000 Oryza sativa ssp. japonica HOM05D006497 ORTHO05D008263 4.6e-50 201.4 156 74.4
Potri.018G058200 Populus trichocarpa HOM05D006497 ORTHO05D008263 2.7e-34 149.1 115 62.6
Sabra18G0054600 Salix brachista HOM05D006497 ORTHO05D008263 1.8e-33 146.4 107 66.4
CANSAT54G2618 Cannabis sativa HOM05D006497 ORTHO05D008263 6.7e-33 144.4 97 72.2
Atru.chr7.2042 Acer truncatum HOM05D006497 ORTHO05D008263 5.7e-32 141.4 97 70.1
GSVIVG01035327001 Vitis vinifera HOM05D006497 ORTHO05D008263 7.4e-32 141.0 97 71.1
ECA246G5018 Erigeron canadensis HOM05D006497 ORTHO05D008263 1.3e-31 140.2 97 73.2
Hma1.2p1_0049F.1_g028230 Hydrangea macrophylla HOM05D006497 ORTHO05D008263 1.3e-31 140.2 97 68.0
Lsat_1_v5_gn_3_27161 Lactuca sativa HOM05D006497 ORTHO05D008263 1.3e-31 140.2 97 72.2
PSO210G2909 Papaver somniferum HOM05D006497 ORTHO05D008263 1.3e-31 140.2 123 59.3
Eucgr.C00622 Eucalyptus grandis HOM05D006497 ORTHO05D008263 1.7e-31 139.8 96 69.8
SalBow1G7152 Salvia bowleyana HOM05D006497 ORTHO05D008263 1.7e-31 139.8 97 70.1
Sc09g0009540 Simmondsia chinensis HOM05D006497 ORTHO05D008263 1.7e-31 139.8 102 67.6
Solyc07g063140.1 Solanum lycopersicum HOM05D006497 ORTHO05D008263 1.7e-31 139.8 97 70.1
FvH4_2g35131 Fragaria vesca HOM05D006497 ORTHO05D008263 2.2e-31 139.4 117 60.7
COL.COLO4_21011 Corchorus olitorius HOM05D006497 ORTHO05D008263 4.8e-31 138.3 97 66.0
Sopen07g031330 Solanum pennellii HOM05D006497 ORTHO05D008263 4.8e-31 138.3 134 56.7
Migut.E01547 Erythranthe guttata HOM05D006497 ORTHO05D008263 6.3e-31 137.9 97 70.1
PSO210G1815 Papaver somniferum HOM05D006497 ORTHO05D008263 6.3e-31 137.9 97 68.0
Prupe.1G443400 Prunus persica HOM05D006497 ORTHO05D008263 6.3e-31 137.9 124 56.5
Nn8g39006 Nelumbo nucifera HOM05D006497 ORTHO05D008263 8.2e-31 137.5 97 70.1
Actinidia18207 Actinidia chinensis HOM05D006497 ORTHO05D008263 1.1e-30 137.1 97 68.0
Nitab4.5_0002021g0040 Nicotiana tabacum HOM05D006497 ORTHO05D008263 1.1e-30 137.1 97 68.0
AUR62040211 Chenopodium quinoa HOM05D006497 ORTHO05D008263 1.4e-30 136.7 100 66.0
FAN15G0473 Fragaria x ananassa HOM05D006497 ORTHO05D008263 1.4e-30 136.7 107 63.6
CSS0028638 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 1.8e-30 136.3 97 67.0
EL10Ac2g03958 Beta vulgaris HOM05D006497 ORTHO05D008263 2.4e-30 136.0 100 66.0
Nitab4.5_0000318g0100 Nicotiana tabacum HOM05D006497 ORTHO05D008263 2.4e-30 136.0 97 67.0
Thecc.09G049300 Theobroma cacao HOM05D006497 ORTHO05D008263 2.4e-30 136.0 143 50.3
TAR636G3582 Trochodendron aralioides HOM05D006497 ORTHO05D008263 2.4e-30 136.0 112 61.6
Cc08_g10030 Coffea canephora HOM05D006497 ORTHO05D008263 3.1e-30 135.6 104 64.4
Peaxi162Scf00840g00427 Petunia axillaris HOM05D006497 ORTHO05D008263 3.1e-30 135.6 97 67.0
QL12p040844 Quercus lobata HOM05D006497 ORTHO05D008263 3.1e-30 135.6 96 67.7
PGR031G1870 Punica granatum HOM05D006497 ORTHO05D008263 4.1e-30 135.2 103 63.1
MD08G1108800 Malus domestica HOM05D006497 ORTHO05D008263 5.3e-30 134.8 96 66.7
RcHm_v2.0_Chr6g0306821 Rosa chinensis HOM05D006497 ORTHO05D008263 5.3e-30 134.8 102 66.7
DCAR_003057 Daucus carota HOM05D006497 ORTHO05D008263 6.9e-30 134.4 97 68.0
CDE10G0177 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 9.1e-30 134.0 110 59.1
PGSC0003DMG400012416 Solanum tuberosum HOM05D006497 ORTHO05D008263 9.1e-30 134.0 97 67.0
CSS0007660 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 1.2e-29 133.7 97 66.0
CSS0049899 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 1.2e-29 133.7 97 66.0
Cpa.g.sc27.217 Carica papaya HOM05D006497 ORTHO05D008263 1.2e-29 133.7 97 66.0
Duzib168G0301 Durio zibethinus HOM05D006497 ORTHO05D008263 2.0e-29 132.9 97 63.9
Aqoxy6G00985 Aquilegia oxysepala HOM05D006497 ORTHO05D008263 2.6e-29 132.5 119 59.7
Gorai.001G024500 Gossypium raimondii HOM05D006497 ORTHO05D008263 2.6e-29 132.5 97 62.9
CDE10G1018 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 3.4e-29 132.1 121 56.2
Gohir.A07G022176 Gossypium hirsutum HOM05D006497 ORTHO05D008263 3.4e-29 132.1 97 62.9
CsaV3_3G048400 Cucumis sativus L. HOM05D006497 ORTHO05D008263 4.5e-29 131.7 146 54.8
Rhsim05G0006000 Rhododendron simsii HOM05D006497 ORTHO05D008263 4.5e-29 131.7 97 64.9
Ciclev10009788m.g Citrus clementina HOM05D006497 ORTHO05D008263 5.9e-29 131.3 97 64.9
Ah.10g034670 Amaranthus hybridus HOM05D006497 ORTHO05D008263 1.0e-28 130.6 97 62.9
THA.LOC104803742 Tarenaya hassleriana HOM05D006497 ORTHO05D008263 1.3e-28 130.2 121 56.2
MSTRG.11681 Avicennia marina HOM05D006497 ORTHO05D008263 2.2e-28 129.4 97 67.0
ClCG11G014990 Citrullus lanatus HOM05D006497 ORTHO05D008263 2.9e-28 129.0 124 54.8
Migut.A00169 Erythranthe guttata HOM05D006497 ORTHO05D008263 2.9e-28 129.0 124 54.8
Nn8g40951 Nelumbo nucifera HOM05D006497 ORTHO05D008263 2.9e-28 129.0 96 66.7
HPP92_013944 Vanilla planifolia HOM05D006497 ORTHO05D008263 2.9e-28 129.0 97 61.9
CiPaw.08G027800 Carya illinoinensis HOM05D006497 ORTHO05D008263 3.8e-28 128.6 97 64.9
Haze_01965 Corylus avellana HOM05D006497 ORTHO05D008263 5.0e-28 128.3 95 65.3
Thhalv10026449m.g Eutrema salsugineum HOM05D006497 ORTHO05D008263 5.0e-28 128.3 147 48.3
arahy.Tifrunner.gnm1.ann1.0Y6FKJ Arachis hypogaea HOM05D006497 ORTHO05D008263 6.5e-28 127.9 97 62.9
MELO3C003479.2 Cucumis melo HOM05D006497 ORTHO05D008263 8.5e-28 127.5 146 52.7
Sed0025405 Sechium edule HOM05D006497 ORTHO05D008263 8.5e-28 127.5 114 57.0
unitig_32.g11478 Utricularia gibba HOM05D006497 ORTHO05D008263 1.4e-27 126.7 97 63.9
Cfa005390 Carpinus fangiana HOM05D006497 ORTHO05D008263 1.9e-27 126.3 95 64.2
ATR0749G075 Amborella trichopoda HOM05D006497 ORTHO05D008263 2.5e-27 125.9 97 60.8
AT4G32915 Arabidopsis thaliana HOM05D006497 ORTHO05D008263 2.5e-27 125.9 97 60.8
arahy.Tifrunner.gnm1.ann1.E0CW41 Arachis hypogaea HOM05D006497 ORTHO05D008263 3.2e-27 125.6 97 61.9
CAN.G162.59 Capsicum annuum HOM05D006497 ORTHO05D008263 3.2e-27 125.6 115 58.3
Sp7g30690 Schrenkiella parvula HOM05D006497 ORTHO05D008263 3.2e-27 125.6 133 51.1
AL7G18780 Arabidopsis lyrata HOM05D006497 ORTHO05D008263 5.5e-27 124.8 126 51.6
Sed0009640 Sechium edule HOM05D006497 ORTHO05D008263 5.5e-27 124.8 129 52.7
VMungo0720G1877 Vigna mungo HOM05D006497 ORTHO05D008263 5.5e-27 124.8 97 61.9
A03p61670 Brassica napus HOM05D006497 ORTHO05D008263 7.2e-27 124.4 94 62.8
Ca_10596_v3 Cicer arietinum L. HOM05D006497 ORTHO05D008263 7.2e-27 124.4 116 54.3
Glyma.10G214200 Glycine max HOM05D006497 ORTHO05D008263 7.2e-27 124.4 97 61.9
Glyma.20G177400 Glycine max HOM05D006497 ORTHO05D008263 7.2e-27 124.4 104 56.7
ATR0304G027 Amborella trichopoda HOM05D006497 ORTHO05D008263 1.2e-26 123.6 97 60.8
Carub.0007s0757 Capsella rubella HOM05D006497 ORTHO05D008263 1.2e-26 123.6 97 58.8
Lj5g0021165 Lotus japonicus HOM05D006497 ORTHO05D008263 1.2e-26 123.6 96 59.4
AUR62009213 Chenopodium quinoa HOM05D006497 ORTHO05D008263 1.6e-26 123.2 100 59.0
A08p17840 Brassica napus HOM05D006497 ORTHO05D008263 2.1e-26 122.9 147 46.9
Medtr1g095920 Medicago truncatula HOM05D006497 ORTHO05D008263 2.1e-26 122.9 97 60.8
Phvul.007G091500 Phaseolus vulgaris HOM05D006497 ORTHO05D008263 2.1e-26 122.9 104 56.7
Psat6g186080 Pisum sativum HOM05D006497 ORTHO05D008263 2.1e-26 122.9 97 61.9
C03p86910 Brassica napus HOM05D006497 ORTHO05D008263 3.6e-26 122.1 151 48.3
BolC3t20984H Brassica oleracea HOM05D006497 ORTHO05D008263 3.6e-26 122.1 151 48.3
Lalb_Chr06g0162131 Lupinus albus HOM05D006497 ORTHO05D008263 4.7e-26 121.7 94 61.7
Oeu011793.1 Olea europaea HOM05D006497 ORTHO05D008263 4.7e-26 121.7 122 51.6
BraA08t33734Z Brassica rapa HOM05D006497 ORTHO05D008263 7.9e-26 120.9 147 46.3
BcaB03g12770 Brassica carinata HOM05D006497 ORTHO05D008263 1.0e-25 120.6 147 47.6
BcaNung02143 Brassica carinata HOM05D006497 ORTHO05D008263 1.0e-25 120.6 152 47.4
BraA03t15206Z Brassica rapa HOM05D006497 ORTHO05D008263 1.0e-25 120.6 145 47.6
SGA_v2.0_scaffold163G38048 Striga asiatica HOM05D006497 ORTHO05D008263 1.0e-25 120.6 163 42.9
TPR.G11934 Trifolium pratense HOM05D006497 ORTHO05D008263 1.0e-25 120.6 97 59.8
TPR.G1790 Trifolium pratense HOM05D006497 ORTHO05D008263 1.0e-25 120.6 97 59.8
BolC7t46384H Brassica oleracea HOM05D006497 ORTHO05D008263 1.4e-25 120.2 145 47.6
CARHR240920 Cardamine hirsuta HOM05D006497 ORTHO05D008263 3.0e-25 119.0 128 48.4
C07p59400 Brassica napus HOM05D006497 ORTHO05D008263 2.6e-24 115.9 145 46.9
Hund19485 Selenicereus undatus HOM05D006497 ORTHO05D008263 4.4e-24 115.2 138 46.4
Aa31LG2G18050 Aethionema arabicum HOM05D006497 ORTHO05D008263 4.8e-23 111.7 93 58.1
SEGI_35319 Sequoiadendron giganteum HOM05D006497 ORTHO05D008263 9.1e-22 107.5 92 54.3
TWI32G0413 Tripterygium wilfordii HOM05D006497 ORTHO05D008263 1.7e-20 103.2 72 69.4
FAN27G1249 Fragaria x ananassa HOM05D006497 ORTHO05D008263 3.8e-20 102.1 117 51.3
HanXRQChr17g0538891 Helianthus annuus HOM05D006497 ORTHO05D008263 6.5e-20 101.3 72 69.4
SGA_v2.0_scaffold169G38673 Striga asiatica HOM05D006497 ORTHO05D008263 9.4e-19 97.4 97 53.6
Mapoly0154s0030 Marchantia polymorpha HOM05D006497 ORTHO05D008263 1.6e-18 96.7 143 38.5
CBR_g31997 Chara braunii HOM05D006497 ORTHO05D008263 2.7e-18 95.9 102 47.1
arahy.Tifrunner.gnm1.ann1.2EH2S8 Arachis hypogaea HOM05D006497 ORTHO05D009640 8.0e-18 94.4 176 35.2
MBI13_g05466_MAGBIO Magnolia biondii HOM05D006497 ORTHO05D008263 1.0e-17 94.0 54 79.6
Pp3c2_33430 Physcomitrium patens HOM05D006497 ORTHO05D008263 2.0e-16 89.7 110 36.4
Manes.03G057500 Manihot esculenta HOM05D006497 ORTHO05D008263 7.4e-16 87.8 61 65.6
Dinv27945 Davidia involucrata HOM05D006497 ORTHO05D008263 1.8e-14 83.2 54 72.2
vmacro08276 Vaccinium macrocarpon HOM05D006497 ORTHO05D008263 1.2e-13 80.5 62 59.7
SMO146G0150 Selaginella moellendorffii HOM05D006497 ORTHO05D008263 3.5e-13 79.0 96 37.5
Cre08.g364650 Chlamydomonas reinhardtii HOM05D001184 ORTHO05D007940 1.5e-11 73.6 111 36.0
MCO07G547 Micromonas commoda HOM05D001184 ORTHO05D007940 3.2e-11 72.4 100 42.0
Gohir.D07G023800 Gossypium hirsutum HOM05D006497 ORTHO05D008263 5.5e-11 71.6 47 68.1
PRCOL_00005999 Prasinoderma coloniale HOM05D006497 ORTHO05D008263 4.4e-08 62.0 96 32.3


User provided reference genes

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