Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb218310 Zea mays HOM05D000881 ORTHO05D000666 9.5e-139 496.9 261 100.0
Os03g0656000 Oryza sativa ssp. japonica HOM05D000881 ORTHO05D000666 5.4e-33 145.6 265 40.8
HPP92_019534 Vanilla planifolia HOM05D000881 ORTHO05D000666 5.8e-11 72.4 147 36.1
Dinv25100 Davidia involucrata HOM05D000881 ORTHO05D000666 2.9e-10 70.1 112 38.4
Sabra13G0049400 Salix brachista HOM05D000881 ORTHO05D000666 4.9e-10 69.3 137 35.8
Rhsim03G0053400 Rhododendron simsii HOM05D000881 ORTHO05D000666 8.4e-10 68.6 136 32.4
THA.LOC104826481 Tarenaya hassleriana HOM05D000881 ORTHO05D000666 1.1e-09 68.2 135 33.3
AT5G20970 Arabidopsis thaliana HOM05D000881 ORTHO05D000666 3.2e-09 66.6 113 33.6
Sp4g09910 Schrenkiella parvula HOM05D000881 ORTHO05D000666 4.1e-09 66.2 108 35.2
Zm00001eb032310 Zea mays HOM05D000881 ORTHO05D000666 4.1e-09 66.2 106 35.8
Carub.0006s1929 Capsella rubella HOM05D000881 ORTHO05D000666 5.4e-09 65.9 123 33.3
GSVIVG01022437001 Vitis vinifera HOM05D000881 ORTHO05D000666 9.2e-09 65.1 170 30.6
Os10g0437900 Oryza sativa ssp. japonica HOM05D000881 ORTHO05D000666 2.1e-08 63.9 125 36.0
BcaC03g13822 Brassica carinata HOM05D000881 ORTHO05D000666 2.7e-08 63.5 183 30.1
BcaC04g19495 Brassica carinata HOM05D000881 ORTHO05D000666 2.7e-08 63.5 91 35.2
C09p55080 Brassica napus HOM05D000881 ORTHO05D000666 2.7e-08 63.5 91 35.2
Sabra19G0049000 Salix brachista HOM05D000881 ORTHO05D000666 2.7e-08 63.5 118 33.1
Actinidia03943 Actinidia chinensis HOM05D000881 ORTHO05D000666 3.5e-08 63.2 124 32.3
Lsat_1_v5_gn_1_87140 Lactuca sativa HOM05D000881 ORTHO05D000666 3.5e-08 63.2 116 33.6
Psat1g121560 Pisum sativum HOM05D000881 ORTHO05D000666 3.5e-08 63.2 125 32.0
A10p19060 Brassica napus HOM05D000881 ORTHO05D000666 4.6e-08 62.8 91 34.1
Carub.0004s0767 Capsella rubella HOM05D000881 ORTHO05D000666 4.6e-08 62.8 108 33.3
Potri.013G054900 Populus trichocarpa HOM05D000881 ORTHO05D000666 6.0e-08 62.4 155 29.7
AL6G32540 Arabidopsis lyrata HOM05D000881 ORTHO05D000666 7.8e-08 62.0 144 27.8
C02p10560 Brassica napus HOM05D000881 ORTHO05D000666 7.8e-08 62.0 175 30.3
BolC2t07090H Brassica oleracea HOM05D000881 ORTHO05D000666 7.8e-08 62.0 182 30.2
BraA02t05608Z Brassica rapa HOM05D000881 ORTHO05D000666 7.8e-08 62.0 175 30.3
CARHR119520 Cardamine hirsuta HOM05D000881 ORTHO05D000666 7.8e-08 62.0 123 30.9
MBI11_g07704_MAGBIO Magnolia biondii HOM05D000881 ORTHO05D000666 7.8e-08 62.0 106 30.2
AL4G20880 Arabidopsis lyrata HOM05D000881 ORTHO05D000666 1.0e-07 61.6 115 32.2
vmacro07553 Vaccinium macrocarpon HOM05D000881 ORTHO05D000666 1.0e-07 61.6 132 31.1
Actinidia37795 Actinidia chinensis HOM05D000881 ORTHO05D000666 1.3e-07 61.2 129 32.6
BcaB05g22794 Brassica carinata HOM05D000881 ORTHO05D000666 1.7e-07 60.8 96 34.4
BNapus_Darmor_BZH_scaffold_38p01230 Brassica napus HOM05D000881 ORTHO05D000666 1.7e-07 60.8 173 28.9
arahy.Tifrunner.gnm1.ann1.ZVX95B Arachis hypogaea HOM05D000881 ORTHO05D000666 2.3e-07 60.5 123 32.5
Sp6g23550 Schrenkiella parvula HOM05D000881 ORTHO05D000666 2.3e-07 60.5 123 30.1
Haze_23630 Corylus avellana HOM05D000881 ORTHO05D000666 3.0e-07 60.1 99 32.3
THA.LOC104810968 Tarenaya hassleriana HOM05D000881 ORTHO05D000666 3.0e-07 60.1 137 31.4
TPR.G11722 Trifolium pratense HOM05D000881 ORTHO05D000666 3.0e-07 60.1 106 32.1
EL10Ac5g11763 Beta vulgaris HOM05D000881 ORTHO05D000666 3.9e-07 59.7 114 34.2
Thhalv10014544m.g Eutrema salsugineum HOM05D000881 ORTHO05D000666 3.9e-07 59.7 221 26.2
BolC3t13661H Brassica oleracea HOM05D000881 ORTHO05D000666 5.1e-07 59.3 168 27.4
CsaV3_1G041760 Cucumis sativus L. HOM05D000881 ORTHO05D000666 5.1e-07 59.3 134 29.1
Thhalv10002090m.g Eutrema salsugineum HOM05D000881 ORTHO05D000666 5.1e-07 59.3 123 31.7
Medtr6g478190 Medicago truncatula HOM05D000881 ORTHO05D000666 5.1e-07 59.3 121 31.4
Os03g0157600 Oryza sativa ssp. japonica HOM05D000881 ORTHO05D000666 5.1e-07 59.3 86 36.0
Phvul.011G184300 Phaseolus vulgaris HOM05D000881 ORTHO05D000666 6.6e-07 58.9 144 29.9
PGR119G0695 Punica granatum HOM05D000881 ORTHO05D000666 6.6e-07 58.9 94 35.1
Sc01g0005070 Simmondsia chinensis HOM05D000881 ORTHO05D000666 6.6e-07 58.9 128 32.0
Aa31LG1G13760 Aethionema arabicum HOM05D000881 ORTHO05D000666 8.6e-07 58.5 244 26.2
AT2G27140 Arabidopsis thaliana HOM05D000881 ORTHO05D000666 8.6e-07 58.5 115 30.4
A03p26740 Brassica napus HOM05D000881 ORTHO05D000666 8.6e-07 58.5 114 32.5
Ciclev10018348m.g Citrus clementina HOM05D000881 ORTHO05D000666 8.6e-07 58.5 133 26.3
Glyma.19G114200 Glycine max HOM05D000881 ORTHO05D000666 8.6e-07 58.5 132 28.8
CSS0021436 Camellia sinensis var. sinensis HOM05D000881 ORTHO05D000666 1.1e-06 58.2 119 34.5
ClCG03G014410 Citrullus lanatus HOM05D000881 ORTHO05D000666 1.1e-06 58.2 123 33.3
Lj2g0006631 Lotus japonicus HOM05D000881 ORTHO05D000666 1.1e-06 58.2 132 27.3
Prupe.6G151500 Prunus persica HOM05D000881 ORTHO05D000666 1.1e-06 58.2 125 30.4
Rhsim03G0053200 Rhododendron simsii HOM05D000881 ORTHO05D000666 1.1e-06 58.2 163 27.0
BraA10t43985Z Brassica rapa HOM05D000881 ORTHO05D000666 1.5e-06 57.8 133 29.3
MELO3C015587.2 Cucumis melo HOM05D000881 ORTHO05D000666 1.5e-06 57.8 119 31.9
LjContig00564g0002053 Lotus japonicus HOM05D000881 ORTHO05D000666 1.5e-06 57.8 106 33.0
LjContig00564g0024719 Lotus japonicus HOM05D000881 ORTHO05D000666 1.5e-06 57.8 106 33.0
QL11p032427 Quercus lobata HOM05D000881 ORTHO05D000666 1.5e-06 57.8 106 34.0
Rhsim01G0197700 Rhododendron simsii HOM05D000881 ORTHO05D000666 1.5e-06 57.8 124 29.0
Rhsim03G0053800 Rhododendron simsii HOM05D000881 ORTHO05D000666 1.5e-06 57.8 105 30.5
MELO3C015589.2 Cucumis melo HOM05D000881 ORTHO05D000666 1.9e-06 57.4 119 31.9
MD11G1178700 Malus domestica HOM05D000881 ORTHO05D000666 1.9e-06 57.4 114 33.3
HanXRQChr01g0026391 Helianthus annuus HOM05D000881 ORTHO05D000666 2.5e-06 57.0 104 32.7
Lalb_Chr04g0249781 Lupinus albus HOM05D000881 ORTHO05D000666 2.5e-06 57.0 109 31.2
MBI14_g12734_MAGBIO Magnolia biondii HOM05D000881 ORTHO05D000666 2.5e-06 57.0 110 30.0
Aa31LG11G5820 Aethionema arabicum HOM05D000881 ORTHO05D000666 3.3e-06 56.6 128 27.3
Gohir.A11G232800 Gossypium hirsutum HOM05D000881 ORTHO05D000666 3.3e-06 56.6 160 27.5
Nn2g15728 Nelumbo nucifera HOM05D000881 ORTHO05D000666 3.3e-06 56.6 106 31.1
Psat3g087960 Pisum sativum HOM05D000881 ORTHO05D000666 3.3e-06 56.6 107 30.8
TWI34G1202 Tripterygium wilfordii HOM05D000881 ORTHO05D000666 3.3e-06 56.6 157 28.7
Manes.04G055300 Manihot esculenta HOM05D000881 ORTHO05D000666 4.3e-06 56.2 130 30.0
Phvul.001G113500 Phaseolus vulgaris HOM05D000881 ORTHO05D000666 4.3e-06 56.2 120 30.8
TPR.G19878 Trifolium pratense HOM05D000881 ORTHO05D000666 4.3e-06 56.2 124 29.8
CSS0033822 Camellia sinensis var. sinensis HOM05D000881 ORTHO05D000666 5.6e-06 55.8 131 33.6
Glyma.16G038600 Glycine max HOM05D000881 ORTHO05D000666 5.6e-06 55.8 121 29.8
Lsat_1_v5_gn_7_14200 Lactuca sativa HOM05D000881 ORTHO05D000666 5.6e-06 55.8 120 30.0
Nn2g14496 Nelumbo nucifera HOM05D000881 ORTHO05D000666 5.6e-06 55.8 128 28.9
Nn4g23057 Nelumbo nucifera HOM05D000881 ORTHO05D000666 5.6e-06 55.8 108 31.5
Aqoxy3G03278 Aquilegia oxysepala HOM05D000881 ORTHO05D000666 7.3e-06 55.5 112 27.7
BcaNung05754 Brassica carinata HOM05D000881 ORTHO05D000666 7.3e-06 55.5 182 26.9
C03p11910 Brassica napus HOM05D000881 ORTHO05D000666 7.3e-06 55.5 182 26.9
CDE04G2129 Ceratophyllum demersum HOM05D000881 ORTHO05D000666 7.3e-06 55.5 104 35.6
AUR62041192 Chenopodium quinoa HOM05D000881 ORTHO05D000666 7.3e-06 55.5 124 30.6
COL.COLO4_32970 Corchorus olitorius HOM05D000881 ORTHO05D000666 7.3e-06 55.5 110 30.9
CsaV3_1G041730 Cucumis sativus L. HOM05D000881 ORTHO05D000666 7.3e-06 55.5 131 31.3
Sabra09G0120900 Salix brachista HOM05D000881 ORTHO05D000666 7.3e-06 55.5 125 31.2
CDE07G1560 Ceratophyllum demersum HOM05D000881 ORTHO05D000666 9.6e-06 55.1 107 32.7
Medtr5g087450 Medicago truncatula HOM05D000881 ORTHO05D000666 9.6e-06 55.1 106 31.1
Nn5g27450 Nelumbo nucifera HOM05D000881 ORTHO05D000666 9.6e-06 55.1 174 27.0
Potri.008G013800 Populus trichocarpa HOM05D000881 ORTHO05D000666 9.6e-06 55.1 117 28.2
PGSC0003DMG400018717 Solanum tuberosum HOM05D000881 ORTHO05D000666 9.6e-06 55.1 129 31.0


User provided reference genes

Program Settings