Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb214510 Zea mays HOM05D006813 ORTHO05D008657 1.2e-219 766.1 387 100.0
Zm00001eb057930 Zea mays HOM05D006813 ORTHO05D008657 3.4e-169 598.6 345 86.7
Os03g0758900 Oryza sativa ssp. japonica HOM05D006813 ORTHO05D008657 4.2e-159 565.1 411 74.2
Manes.02G049900 Manihot esculenta HOM05D006813 ORTHO05D008657 1.5e-124 450.3 365 63.3
QL02p085115 Quercus lobata HOM05D006813 ORTHO05D008657 2.9e-123 446.0 349 64.2
Potri.004G120900 Populus trichocarpa HOM05D006813 ORTHO05D008657 4.9e-123 445.3 363 63.1
Nn4g23302 Nelumbo nucifera HOM05D006813 ORTHO05D008657 3.2e-122 442.6 373 60.3
Sabra04G0067300 Salix brachista HOM05D006813 ORTHO05D008657 4.6e-121 438.7 369 61.2
Psat1g069960 Pisum sativum HOM05D006813 ORTHO05D008657 7.8e-121 438.0 363 60.1
Ciclev10013781m.g Citrus clementina HOM05D006813 ORTHO05D008657 1.0e-120 437.6 366 60.7
CSS0034099 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 1.3e-120 437.2 366 60.9
Cfa007604 Carpinus fangiana HOM05D006813 ORTHO05D008657 1.3e-120 437.2 363 60.9
Thecc.04G088600 Theobroma cacao HOM05D006813 ORTHO05D008657 3.0e-120 436.0 364 61.0
Haze_14484 Corylus avellana HOM05D006813 ORTHO05D008657 6.6e-120 434.9 368 60.3
CANSAT64G1527 Cannabis sativa HOM05D006813 ORTHO05D008657 8.6e-120 434.5 347 62.5
Lj2g0012161 Lotus japonicus HOM05D006813 ORTHO05D008657 8.6e-120 434.5 365 59.7
TWI34G0739 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 8.6e-120 434.5 350 62.6
HPP92_015887 Vanilla planifolia HOM05D006813 ORTHO05D008657 8.6e-120 434.5 374 59.4
TWI34G0213 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 1.5e-119 433.7 350 63.1
TAR371G1040 Trochodendron aralioides HOM05D006813 ORTHO05D008657 3.3e-119 432.6 404 55.2
arahy.Tifrunner.gnm1.ann1.GGC6H3 Arachis hypogaea HOM05D006813 ORTHO05D008657 9.5e-119 431.0 349 61.3
Lalb_Chr02g0159111 Lupinus albus HOM05D006813 ORTHO05D008657 1.6e-118 430.3 348 60.3
Thhalv10004355m.g Eutrema salsugineum HOM05D006813 ORTHO05D008657 3.6e-118 429.1 348 61.5
AT3G29185 Arabidopsis thaliana HOM05D006813 ORTHO05D008657 4.7e-118 428.7 373 59.5
arahy.Tifrunner.gnm1.ann1.DSSH0H Arachis hypogaea HOM05D006813 ORTHO05D008657 4.7e-118 428.7 349 60.7
Actinidia06110 Actinidia chinensis HOM05D006813 ORTHO05D008657 1.4e-117 427.2 358 59.2
ClCG11G004590 Citrullus lanatus HOM05D006813 ORTHO05D008657 1.4e-117 427.2 364 60.4
MELO3C022015.2 Cucumis melo HOM05D006813 ORTHO05D008657 1.4e-117 427.2 364 60.7
Gorai.012G051400 Gossypium raimondii HOM05D006813 ORTHO05D008657 1.4e-117 427.2 387 58.9
Gohir.A05G369200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 1.8e-117 426.8 362 60.8
AUR62034457 Chenopodium quinoa HOM05D006813 ORTHO05D008657 3.1e-117 426.0 352 60.8
Nitab4.5_0000568g0240 Nicotiana tabacum HOM05D006813 ORTHO05D008657 3.1e-117 426.0 346 59.8
Aqoxy3G03517 Aquilegia oxysepala HOM05D006813 ORTHO05D008657 4.0e-117 425.6 346 61.3
Medtr6g013150 Medicago truncatula HOM05D006813 ORTHO05D008657 4.0e-117 425.6 350 60.9
THA.LOC104805490 Tarenaya hassleriana HOM05D006813 ORTHO05D008657 4.0e-117 425.6 373 59.5
Sc14g0006120 Simmondsia chinensis HOM05D006813 ORTHO05D008657 5.2e-117 425.2 361 60.4
Atru.chr8.345 Acer truncatum HOM05D006813 ORTHO05D008657 6.8e-117 424.9 349 61.6
Gohir.D04G046200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 6.8e-117 424.9 387 58.7
PSO063G1088 Papaver somniferum HOM05D006813 ORTHO05D008657 8.9e-117 424.5 349 60.5
PGR004G2573 Punica granatum HOM05D006813 ORTHO05D008657 8.9e-117 424.5 346 61.0
Nitab4.5_0001591g0010 Nicotiana tabacum HOM05D006813 ORTHO05D008657 1.2e-116 424.1 346 59.8
CsaV3_5G038340 Cucumis sativus L. HOM05D006813 ORTHO05D008657 1.5e-116 423.7 366 59.0
MSTRG.3341 Avicennia marina HOM05D006813 ORTHO05D008657 3.4e-116 422.5 346 61.6
C07p38090 Brassica napus HOM05D006813 ORTHO05D008657 3.4e-116 422.5 348 60.6
BolC7t44331H Brassica oleracea HOM05D006813 ORTHO05D008657 3.4e-116 422.5 348 60.6
Glyma.19G026800 Glycine max HOM05D006813 ORTHO05D008657 4.4e-116 422.2 351 60.7
VMungo0464G0720 Vigna mungo HOM05D006813 ORTHO05D008657 5.8e-116 421.8 349 61.0
MBI07_g46965_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 9.8e-116 421.0 353 61.2
Duzib264G0095 Durio zibethinus HOM05D006813 ORTHO05D008657 1.3e-115 420.6 370 59.2
A06p40070 Brassica napus HOM05D006813 ORTHO05D008657 2.2e-115 419.9 348 60.9
BraA06t26922Z Brassica rapa HOM05D006813 ORTHO05D008657 2.2e-115 419.9 348 60.9
Glyma.13G060100 Glycine max HOM05D006813 ORTHO05D008657 2.2e-115 419.9 373 57.4
Sp2g17800 Schrenkiella parvula HOM05D006813 ORTHO05D008657 2.2e-115 419.9 379 57.5
FvH4_6g47790 Fragaria vesca HOM05D006813 ORTHO05D008657 3.7e-115 419.1 347 60.2
FAN14G3538 Fragaria x ananassa HOM05D006813 ORTHO05D008657 3.7e-115 419.1 347 60.2
SalBow1G5727 Salvia bowleyana HOM05D006813 ORTHO05D008657 8.3e-115 417.9 347 61.4
AL5G19100 Arabidopsis lyrata HOM05D006813 ORTHO05D008657 1.1e-114 417.5 348 60.1
Phvul.004G032400 Phaseolus vulgaris HOM05D006813 ORTHO05D008657 1.1e-114 417.5 349 59.6
EL10Ac2g03036 Beta vulgaris HOM05D006813 ORTHO05D008657 1.4e-114 417.2 372 57.3
GSVIVG01011472001 Vitis vinifera HOM05D006813 ORTHO05D008657 2.4e-114 416.4 377 57.8
CSS0013443 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 4.1e-114 415.6 359 58.5
RcHm_v2.0_Chr2g0166981 Rosa chinensis HOM05D006813 ORTHO05D008657 4.1e-114 415.6 346 59.5
BcaC06g30887 Brassica carinata HOM05D006813 ORTHO05D008657 5.4e-114 415.2 382 56.5
Rhsim10G0035200 Rhododendron simsii HOM05D006813 ORTHO05D008657 5.4e-114 415.2 347 60.2
ATR0730G176 Amborella trichopoda HOM05D006813 ORTHO05D008657 7.0e-114 414.8 346 60.4
Actinidia01957 Actinidia chinensis HOM05D006813 ORTHO05D008657 7.8e-113 411.4 351 58.4
PSO063G3583 Papaver somniferum HOM05D006813 ORTHO05D008657 7.8e-113 411.4 349 59.3
CDE04G0700 Ceratophyllum demersum HOM05D006813 ORTHO05D008657 1.0e-112 411.0 352 60.5
CAN.G206.184 Capsicum annuum HOM05D006813 ORTHO05D008657 1.3e-112 410.6 356 57.0
Cc07_g03730 Coffea canephora HOM05D006813 ORTHO05D008657 1.7e-112 410.2 373 55.8
Solyc02g088350.4 Solanum lycopersicum HOM05D006813 ORTHO05D008657 2.3e-112 409.8 346 59.0
vmacro05678 Vaccinium macrocarpon HOM05D006813 ORTHO05D008657 2.3e-112 409.8 348 59.2
Aa31LG2G4040 Aethionema arabicum HOM05D006813 ORTHO05D008657 3.0e-112 409.5 386 56.2
DCAR_025399 Daucus carota HOM05D006813 ORTHO05D008657 5.1e-112 408.7 370 56.2
ECA232G0359 Erigeron canadensis HOM05D006813 ORTHO05D008657 1.1e-111 407.5 350 58.6
PGSC0003DMG400001435 Solanum tuberosum HOM05D006813 ORTHO05D008657 1.1e-111 407.5 346 57.8
Sopen02g033040 Solanum pennellii HOM05D006813 ORTHO05D008657 2.5e-111 406.4 346 57.8
BcaC06g33677 Brassica carinata HOM05D006813 ORTHO05D008657 9.5e-111 404.4 350 59.1
Migut.K01297 Erythranthe guttata HOM05D006813 ORTHO05D008657 3.6e-110 402.5 358 59.2
Lsat_1_v5_gn_4_170001 Lactuca sativa HOM05D006813 ORTHO05D008657 1.4e-109 400.6 355 57.7
HanXRQChr09g0264041 Helianthus annuus HOM05D006813 ORTHO05D008657 1.8e-109 400.2 385 54.8
MD09G1056700 Malus domestica HOM05D006813 ORTHO05D008657 3.1e-109 399.4 364 55.5
Hund13179 Selenicereus undatus HOM05D006813 ORTHO05D008657 2.0e-108 396.7 398 53.0
CiPaw.03G021100 Carya illinoinensis HOM05D006813 ORTHO05D008657 2.2e-107 393.3 391 53.7
SGA_v2.0_scaffold154G37082 Striga asiatica HOM05D006813 ORTHO05D008657 3.7e-107 392.5 394 53.6
Peaxi162Scf00166g00933 Petunia axillaris HOM05D006813 ORTHO05D008657 1.1e-106 391.0 324 59.6
AUR62018125 Chenopodium quinoa HOM05D006813 ORTHO05D008657 2.1e-105 386.7 326 61.0
COL.COLO4_12242 Corchorus olitorius HOM05D006813 ORTHO05D008657 2.7e-105 386.3 322 60.9
Lju41A8T104 Lonicera japonica HOM05D006813 ORTHO05D008657 3.5e-105 386.0 405 52.6
MD17G1054200 Malus domestica HOM05D006813 ORTHO05D008657 7.8e-105 384.8 407 51.4
Dinv33795 Davidia involucrata HOM05D006813 ORTHO05D008657 1.2e-102 377.5 314 60.5
CARHR152350 Cardamine hirsuta HOM05D006813 ORTHO05D008657 3.8e-99 365.9 376 52.4
unitig_0.g2631 Utricularia gibba HOM05D004633 ORTHO05D005503 1.2e-97 360.9 337 54.3
Oeu023718.1 Olea europaea HOM05D006813 ORTHO05D008657 1.7e-96 357.1 306 59.2
TPR.G26959 Trifolium pratense HOM05D006813 ORTHO05D008657 5.6e-95 352.1 301 60.1
SEGI_06128 Sequoiadendron giganteum HOM05D006813 ORTHO05D008657 2.8e-94 349.7 387 48.1
Prupe.3G262000 Prunus persica HOM05D006813 ORTHO05D008657 7.9e-81 305.1 237 62.0
Dinv11496 Davidia involucrata HOM05D006813 ORTHO05D008657 1.9e-79 300.4 317 53.3
Ca_04860_v3 Cicer arietinum L. HOM05D006813 ORTHO05D002040 1.3e-78 297.7 358 46.4
Sed0010301 Sechium edule HOM05D006813 ORTHO05D008657 1.1e-77 294.7 237 60.3
Carub.0005s0792 Capsella rubella HOM05D006813 ORTHO05D008657 1.8e-77 293.9 260 56.9
Pp3c27_2000 Physcomitrium patens HOM05D006813 ORTHO05D008657 4.0e-77 292.7 340 43.2
MBI07_g25549_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 9.9e-76 288.1 277 54.9
Mapoly0015s0143 Marchantia polymorpha HOM05D006813 ORTHO05D008657 2.9e-75 286.6 370 41.9
SalBow1G0723 Salvia bowleyana HOM05D006813 ORTHO05D008657 7.1e-74 282.0 251 59.4
FAN05G4860 Fragaria x ananassa HOM05D006813 ORTHO05D008657 9.3e-74 281.6 294 52.7
Haze_14493 Corylus avellana HOM05D006813 ORTHO05D008657 6.5e-67 258.8 216 59.3
HPP92_015898 Vanilla planifolia HOM05D006813 ORTHO05D008657 4.3e-55 219.5 187 56.1
SMO347G0068 Selaginella moellendorffii HOM05D006813 ORTHO05D008657 7.4e-55 218.8 349 33.8
HPP92_015897 Vanilla planifolia HOM05D006813 ORTHO05D008657 1.6e-33 147.9 123 64.2
AagrBONN_evm.TU.Sc2ySwM_117.3657 Anthoceros agrestis HOM05D006813 ORTHO05D008657 4.0e-32 143.3 181 41.4
BcaC06g30885 Brassica carinata HOM05D006813 ORTHO05D008657 2.6e-31 140.6 113 55.8
SalBow1G7870 Salvia bowleyana HOM05D006813 ORTHO05D008657 9.7e-31 138.7 91 67.0
TPR.G26199 Trifolium pratense HOM05D006813 ORTHO05D001332 3.7e-30 136.7 90 67.8
FAN10G0034 Fragaria x ananassa HOM05D004096 ORTHO05D000898 4.4e-23 113.2 161 41.0
MD09G1057100 Malus domestica HOM05D006813 ORTHO05D008657 2.0e-15 87.8 158 39.2
ECA247G1425 Erigeron canadensis HOM05D006813 ORTHO05D008657 2.7e-12 77.4 53 60.4
HanXRQChr08g0223741 Helianthus annuus HOM05D006813 ORTHO05D008657 1.1e-10 72.0 92 44.6
TAR633G2432 Trochodendron aralioides HOM05D006813 ORTHO05D414814 1.9e-10 71.2 96 43.8


User provided reference genes

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