Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb211510 Zea mays HOM05D002419 ORTHO05D008128 1.8e-91 339.3 181 100.0
Zm00001eb088630 Zea mays HOM05D002419 ORTHO05D008128 8.3e-57 224.2 143 85.3
HPP92_005092 Vanilla planifolia HOM05D002419 ORTHO05D008128 6.8e-35 151.4 153 52.9
Aqoxy6G01314 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 9.2e-32 141.0 160 48.1
Ca_06160_v3 Cicer arietinum L. HOM05D002419 ORTHO05D008128 1.6e-31 140.2 150 52.0
TPR.G11328 Trifolium pratense HOM05D002419 ORTHO05D008128 1.6e-31 140.2 152 50.0
Manes.11G141200 Manihot esculenta HOM05D002419 ORTHO05D008128 2.0e-31 139.8 165 49.7
Carub.0008s2104 Capsella rubella HOM05D002419 ORTHO05D008128 3.5e-31 139.0 155 48.4
Gorai.001G129900 Gossypium raimondii HOM05D002419 ORTHO05D008128 3.5e-31 139.0 161 48.4
Duzib170G1173 Durio zibethinus HOM05D002419 ORTHO05D008128 6.0e-31 138.3 151 48.3
Lalb_Chr25g0283021 Lupinus albus HOM05D002419 ORTHO05D008128 6.0e-31 138.3 158 49.4
GSVIVG01025134001 Vitis vinifera HOM05D002419 ORTHO05D008128 6.0e-31 138.3 157 49.0
BraA10t43836Z Brassica rapa HOM05D002419 ORTHO05D005441 7.8e-31 137.9 167 46.7
COL.COLO4_32908 Corchorus olitorius HOM05D002419 ORTHO05D008128 7.8e-31 137.9 162 48.1
TWI75G1733 Tripterygium wilfordii HOM05D002419 ORTHO05D008128 7.8e-31 137.9 155 48.4
AL8G36950 Arabidopsis lyrata HOM05D002419 ORTHO05D008128 1.0e-30 137.5 169 46.7
AT5G60335 Arabidopsis thaliana HOM05D002419 ORTHO05D008128 1.0e-30 137.5 173 44.5
Thecc.09G260200 Theobroma cacao HOM05D002419 ORTHO05D008128 1.0e-30 137.5 152 48.7
Gohir.D07G120700 Gossypium hirsutum HOM05D002419 ORTHO05D008128 1.3e-30 137.1 161 48.4
LjContig00564g0025850 Lotus japonicus HOM05D002419 ORTHO05D008128 1.7e-30 136.7 151 50.3
MD11G1129900 Malus domestica HOM05D002419 ORTHO05D008128 2.3e-30 136.3 157 47.8
RcHm_v2.0_Chr5g0060661 Rosa chinensis HOM05D002419 ORTHO05D008128 2.3e-30 136.3 157 47.1
Thhalv10014838m.g Eutrema salsugineum HOM05D002419 ORTHO05D008128 3.0e-30 136.0 150 49.3
A10p17550 Brassica napus HOM05D002419 ORTHO05D005441 3.9e-30 135.6 167 46.7
DCAR_006043 Daucus carota HOM05D002419 ORTHO05D008128 3.9e-30 135.6 156 48.1
FAN16G1578 Fragaria x ananassa HOM05D002419 ORTHO05D008128 5.0e-30 135.2 157 46.5
Sc15g0001550 Simmondsia chinensis HOM05D002419 ORTHO05D008128 5.0e-30 135.2 160 45.0
BcaB08g36333 Brassica carinata HOM05D002419 ORTHO05D008128 6.6e-30 134.8 171 43.9
FAN25G2109 Fragaria x ananassa HOM05D002419 ORTHO05D008128 6.6e-30 134.8 157 46.5
Lj2A1017T34 Lonicera japonica HOM05D002419 ORTHO05D008128 6.6e-30 134.8 158 48.7
Phvul.008G206400 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 6.6e-30 134.8 144 51.4
Psat2g021880 Pisum sativum HOM05D002419 ORTHO05D008128 6.6e-30 134.8 152 48.7
Aa31LG1G12400 Aethionema arabicum HOM05D002419 ORTHO05D005441 1.1e-29 134.0 159 47.2
BraA03t10435Z Brassica rapa HOM05D002419 ORTHO05D008128 1.1e-29 134.0 156 46.8
Atru.chr3.3691 Acer truncatum HOM05D002419 ORTHO05D008128 1.5e-29 133.7 148 47.3
Cfa011364 Carpinus fangiana HOM05D005177 ORTHO05D006175 1.5e-29 133.7 150 48.0
Gohir.A07G116300 Gossypium hirsutum HOM05D002419 ORTHO05D008128 1.9e-29 133.3 161 47.2
Sp6g21940 Schrenkiella parvula HOM05D002419 ORTHO05D008128 1.9e-29 133.3 152 48.0
Haze_23915 Corylus avellana HOM05D002419 ORTHO05D008128 3.3e-29 132.5 150 47.3
Glyma.14G041000 Glycine max HOM05D002419 ORTHO05D008128 3.3e-29 132.5 149 48.3
C09p52960 Brassica napus HOM05D002419 ORTHO05D005441 4.3e-29 132.1 167 44.9
COL.COLO4_25247 Corchorus olitorius HOM05D002419 ORTHO05D008128 4.3e-29 132.1 162 47.5
Medtr5g087960 Medicago truncatula HOM05D002419 ORTHO05D008128 5.6e-29 131.7 150 49.3
Potri.006G133800 Populus trichocarpa HOM05D002419 ORTHO05D008128 5.6e-29 131.7 160 48.1
Aqoxy2G01471 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 7.3e-29 131.3 160 44.4
Psat2g022480 Pisum sativum HOM05D002419 ORTHO05D008128 7.3e-29 131.3 152 48.7
BcaC04g19693 Brassica carinata HOM05D002419 ORTHO05D008128 9.5e-29 131.0 167 44.3
A03p11220 Brassica napus HOM05D002419 ORTHO05D008128 9.5e-29 131.0 152 46.7
QL01p037215 Quercus lobata HOM05D002419 ORTHO05D008128 9.5e-29 131.0 150 48.0
Sabra06G0105100 Salix brachista HOM05D002419 ORTHO05D008128 9.5e-29 131.0 163 47.2
CARHR274000 Cardamine hirsuta HOM05D002419 ORTHO05D008128 1.2e-28 130.6 167 44.3
Phvul.008G172000 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 1.2e-28 130.6 144 50.0
PGR102G0399 Punica granatum HOM05D002419 ORTHO05D008128 1.2e-28 130.6 149 51.0
BolC9t58170H Brassica oleracea HOM05D002419 ORTHO05D005441 1.6e-28 130.2 167 44.3
VMungo0647G2488 Vigna mungo HOM05D002419 ORTHO05D008128 1.6e-28 130.2 153 48.4
arahy.Tifrunner.gnm1.ann1.AUHN72 Arachis hypogaea HOM05D002419 ORTHO05D008128 2.1e-28 129.8 167 44.3
MBI04_g27072_MAGBIO Magnolia biondii HOM05D002419 ORTHO05D008128 2.1e-28 129.8 163 45.4
BolC3t13754H Brassica oleracea HOM05D002419 ORTHO05D005441 3.6e-28 129.0 156 45.5
ATR0680G185 Amborella trichopoda HOM05D002419 ORTHO05D008128 4.7e-28 128.6 150 51.3
EL10Ac8g19852 Beta vulgaris HOM05D002419 ORTHO05D008128 4.7e-28 128.6 149 49.0
THA.LOC104814842 Tarenaya hassleriana HOM05D002419 ORTHO05D008128 4.7e-28 128.6 152 46.7
Glyma.02G275000 Glycine max HOM05D002419 ORTHO05D008128 6.2e-28 128.3 149 47.7
CSS0035547 Camellia sinensis var. sinensis HOM05D002419 ORTHO05D008128 8.0e-28 127.9 158 46.2
Dinv29347 Davidia involucrata HOM05D002419 ORTHO05D008128 8.0e-28 127.9 151 46.4
Sabra03G0090700 Salix brachista HOM05D002419 ORTHO05D008128 8.0e-28 127.9 163 47.2
CiPaw.13G107000 Carya illinoinensis HOM05D002419 ORTHO05D008128 1.4e-27 127.1 150 44.7
AUR62027574 Chenopodium quinoa HOM05D002419 ORTHO05D008128 2.3e-27 126.3 148 48.0
ECA248G1487 Erigeron canadensis HOM05D002419 ORTHO05D008128 2.3e-27 126.3 156 47.4
Lsat_1_v5_gn_1_63680 Lactuca sativa HOM05D002419 ORTHO05D008128 2.3e-27 126.3 149 47.7
Sopen06g031430 Solanum pennellii HOM05D002419 ORTHO05D008128 2.3e-27 126.3 152 46.7
Prupe.6G094800 Prunus persica HOM05D002419 ORTHO05D008128 3.1e-27 125.9 157 44.6
Cpa.g.sc139.69 Carica papaya HOM05D002419 ORTHO05D008128 5.2e-27 125.2 162 43.2
Peaxi162Scf00029g01714 Petunia axillaris HOM05D002419 ORTHO05D008128 5.2e-27 125.2 157 44.6
PSO339G2915 Papaver somniferum HOM05D002419 ORTHO05D008128 6.8e-27 124.8 150 48.7
Solyc06g075000.3 Solanum lycopersicum HOM05D002419 ORTHO05D008128 8.9e-27 124.4 152 46.1
PGSC0003DMG400012002 Solanum tuberosum HOM05D002419 ORTHO05D008128 8.9e-27 124.4 152 46.7
CAN.G2109.1 Capsicum annuum HOM05D002419 ORTHO05D008128 1.2e-26 124.0 152 46.1
HanXRQChr01g0019131 Helianthus annuus HOM05D002419 ORTHO05D008128 1.2e-26 124.0 148 48.6
Actinidia03711 Actinidia chinensis HOM05D002419 ORTHO05D008128 1.5e-26 123.6 150 45.3
Rhsim01G0213200 Rhododendron simsii HOM05D002419 ORTHO05D008128 1.5e-26 123.6 172 44.8
TAR633G0359 Trochodendron aralioides HOM05D002419 ORTHO05D008128 1.5e-26 123.6 158 41.1
CsaV3_6G021630 Cucumis sativus L. HOM05D002419 ORTHO05D008128 2.0e-26 123.2 148 43.9
arahy.Tifrunner.gnm1.ann1.2RF374 Arachis hypogaea HOM05D002419 ORTHO05D008128 2.6e-26 122.9 159 42.8
vmacro14413 Vaccinium macrocarpon HOM05D002419 ORTHO05D008128 2.6e-26 122.9 170 44.7
Cc01_g10710 Coffea canephora HOM05D002419 ORTHO05D008128 7.5e-26 121.3 148 48.0
SEGI_36576 Sequoiadendron giganteum HOM05D002419 ORTHO05D008128 7.5e-26 121.3 166 47.0
Oeu009377.1 Olea europaea HOM05D002419 ORTHO05D008128 1.7e-25 120.2 152 45.4
Nitab4.5_0000106g0340 Nicotiana tabacum HOM05D002419 ORTHO05D008128 2.2e-25 119.8 152 45.4
TPR.G11332 Trifolium pratense HOM05D002419 ORTHO05D008128 2.2e-25 119.8 152 46.1
Oeu049265.1 Olea europaea HOM05D002419 ORTHO05D008128 3.7e-25 119.0 152 46.1
PSO801G0184 Papaver somniferum HOM05D002419 ORTHO05D008128 4.9e-25 118.6 150 46.0
Rhsim01G0213400 Rhododendron simsii HOM05D002419 ORTHO05D008128 1.1e-24 117.5 171 42.1
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 1.4e-24 117.1 158 43.7
SalBow7G0817 Salvia bowleyana HOM05D002419 ORTHO05D008128 5.4e-24 115.2 169 45.0
Hund27375 Selenicereus undatus HOM05D002419 ORTHO05D008128 1.2e-23 114.0 181 39.2
ClCG02G020940 Citrullus lanatus HOM05D002419 ORTHO05D008128 1.6e-23 113.6 142 44.4
Ah.01g024490 Amaranthus hybridus HOM05D002419 ORTHO05D008128 2.7e-23 112.8 105 55.2
CBR_g17117 Chara braunii HOM05D002419 ORTHO05D008128 2.7e-23 112.8 142 45.1
SHI33804 Sapria himalayana HOM05D002419 ORTHO05D008128 2.7e-23 112.8 148 44.6
SMO356G0194 Selaginella moellendorffii HOM05D002419 ORTHO05D008128 3.5e-23 112.5 159 40.9
CANSAT54G1052 Cannabis sativa HOM05D002419 ORTHO05D008128 6.0e-23 111.7 159 37.1
Migut.N02582 Erythranthe guttata HOM05D002419 ORTHO05D008128 1.7e-22 110.2 152 45.4
Pp3c27_1710 Physcomitrium patens HOM05D002419 ORTHO05D008128 1.7e-22 110.2 157 41.4
TAR636G2038 Trochodendron aralioides HOM05D002419 ORTHO05D008128 1.7e-22 110.2 153 40.5
Nitab4.5_0000511g0130 Nicotiana tabacum HOM05D002419 ORTHO05D008128 5.1e-22 108.6 127 49.6
TAR636G3373 Trochodendron aralioides HOM05D002419 ORTHO05D008128 8.6e-22 107.8 159 38.4
Lj2A891T18 Lonicera japonica HOM05D002419 ORTHO05D008128 1.1e-21 107.5 106 51.9
Eucgr.B02468 Eucalyptus grandis HOM05D002419 ORTHO05D008128 2.5e-21 106.3 172 39.0
Oeu049264.1 Olea europaea HOM05D002419 ORTHO05D008128 4.3e-21 105.5 146 43.2
SGA_v2.0_scaffold25G11093 Striga asiatica HOM05D002419 ORTHO05D008128 7.3e-21 104.8 165 40.6
Mapoly0013s0067 Marchantia polymorpha HOM05D002419 ORTHO05D008128 2.3e-19 99.8 152 40.1
AagrBONN_evm.TU.Sc2ySwM_228.5883 Anthoceros agrestis HOM05D002419 ORTHO05D008128 6.8e-19 98.2 117 45.3
MSTRG.17782 Avicennia marina HOM05D002419 ORTHO05D008128 6.8e-19 98.2 105 51.4
unitig_699.g19262 Utricularia gibba HOM05D001486 ORTHO05D003845 2.0e-18 96.7 148 40.5
FvH4_3g33270 Fragaria vesca HOM05D002273 ORTHO05D008128 2.6e-18 96.3 97 49.5
FAN11G3570 Fragaria x ananassa HOM05D002273 ORTHO05D008128 3.4e-18 95.9 97 48.5
FAN21G3525 Fragaria x ananassa HOM05D002419 ORTHO05D008128 7.5e-18 94.7 100 47.0
Phvul.008G171900 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 9.9e-18 94.4 149 38.3
AUR62035785 Chenopodium quinoa HOM05D002419 ORTHO05D008128 1.2e-15 87.4 71 64.8
AagrBONN_evm.TU.Sc2ySwM_228.5888 Anthoceros agrestis HOM05D002419 ORTHO05D008128 3.5e-15 85.9 159 35.8
PRCOL_00002156 Prasinoderma coloniale HOM05D002419 ORTHO05D008128 5.1e-14 82.0 152 36.2
MCO16G180 Micromonas commoda HOM05D002419 ORTHO05D008128 8.6e-14 81.3 89 49.4
Cre12.g560100 Chlamydomonas reinhardtii HOM05D002419 ORTHO05D008128 8.9e-11 71.2 99 41.4
BcaB01g04652 Brassica carinata HOM05D000125 ORTHO05D008128 2.2e-09 66.6 80 43.8
BcaB01g04653 Brassica carinata HOM05D002419 ORTHO05D008128 8.4e-09 64.7 67 49.3
MELO3C025746.2 Cucumis melo HOM05D002419 ORTHO05D008128 1.4e-08 63.9 94 40.4
CARHR181070 Cardamine hirsuta HOM05D002419 ORTHO05D008128 2.4e-08 63.2 73 47.9
Sed0027804 Sechium edule HOM05D002419 ORTHO05D008128 3.5e-07 59.3 81 38.3


User provided reference genes

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