Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb210790 Zea mays HOM05D004543 ORTHO05D006042 0.0e+00 1436.4 740 100.0
Os03g0849600 Oryza sativa ssp. japonica HOM05D004543 ORTHO05D006042 0.0e+00 1207.6 755 82.5
Nn3g16500 Nelumbo nucifera HOM05D004543 ORTHO05D006042 1.9e-261 906.0 746 63.4
Haze_07231 Corylus avellana HOM05D004543 ORTHO05D006042 8.1e-260 900.6 749 62.9
Cfa018837 Carpinus fangiana HOM05D004543 ORTHO05D006042 5.2e-259 897.9 749 62.6
Actinidia25587 Actinidia chinensis HOM05D004543 ORTHO05D006042 2.0e-258 896.0 759 61.9
Actinidia15838 Actinidia chinensis HOM05D004543 ORTHO05D006042 2.9e-257 892.1 757 62.1
CSS0037462 Camellia sinensis var. sinensis HOM05D004543 ORTHO05D006042 6.4e-257 891.0 748 61.9
Dinv11159 Davidia involucrata HOM05D004543 ORTHO05D006042 3.2e-256 888.6 745 62.4
Thecc.06G039500 Theobroma cacao HOM05D004543 ORTHO05D006042 5.4e-256 887.9 747 62.1
CiPaw.11G008900 Carya illinoinensis HOM05D004543 ORTHO05D006042 1.6e-255 886.3 749 61.9
Ciclev10018979m.g Citrus clementina HOM05D004543 ORTHO05D006042 2.3e-254 882.5 749 61.3
Ca_00911_v3 Cicer arietinum L. HOM05D004543 ORTHO05D006042 8.7e-254 880.6 749 61.4
Duzib138G1537 Durio zibethinus HOM05D004543 ORTHO05D006042 8.7e-254 880.6 750 61.6
COL.COLO4_26675 Corchorus olitorius HOM05D004543 ORTHO05D006042 1.5e-253 879.8 750 61.6
Lalb_Chr07g0183361 Lupinus albus HOM05D004543 ORTHO05D006042 1.9e-253 879.4 749 61.3
Manes.06G118300 Manihot esculenta HOM05D004543 ORTHO05D006042 2.5e-253 879.0 751 61.1
PSO782G5417 Papaver somniferum HOM05D004543 ORTHO05D006042 5.6e-253 877.9 748 60.7
Phvul.003G210200 Phaseolus vulgaris HOM05D004543 ORTHO05D006042 9.6e-253 877.1 749 61.1
Gohir.A11G168800 Gossypium hirsutum HOM05D004543 ORTHO05D006042 1.3e-252 876.7 749 60.9
Gohir.D11G175000 Gossypium hirsutum HOM05D004543 ORTHO05D006042 1.6e-252 876.3 749 60.7
Gorai.007G187600 Gossypium raimondii HOM05D004543 ORTHO05D006042 4.8e-252 874.8 749 60.5
PGR083G0162 Punica granatum HOM05D004543 ORTHO05D006042 6.2e-252 874.4 749 60.5
arahy.Tifrunner.gnm1.ann1.28ZGNX Arachis hypogaea HOM05D004543 ORTHO05D006042 1.4e-251 873.2 745 60.5
arahy.Tifrunner.gnm1.ann1.9QW7J0 Arachis hypogaea HOM05D004543 ORTHO05D006042 1.4e-251 873.2 745 60.7
FAN13G0766 Fragaria x ananassa HOM05D004543 ORTHO05D006042 1.8e-251 872.8 744 61.3
VMungo1215G3183 Vigna mungo HOM05D004543 ORTHO05D006042 1.8e-251 872.8 751 60.9
PSO063G5574 Papaver somniferum HOM05D004543 ORTHO05D006042 2.4e-251 872.5 748 60.0
vmacro19212 Vaccinium macrocarpon HOM05D004543 ORTHO05D006042 3.1e-251 872.1 748 60.7
Glyma.17G129100 Glycine max HOM05D004543 ORTHO05D006042 5.3e-251 871.3 749 61.0
TWI23G0493 Tripterygium wilfordii HOM05D004543 ORTHO05D006042 5.3e-251 871.3 749 61.0
MD06G1143400 Malus domestica HOM05D004543 ORTHO05D006042 1.2e-250 870.2 749 60.3
QL10p004063 Quercus lobata HOM05D004543 ORTHO05D006042 1.5e-250 869.8 764 59.3
Migut.I00508 Erythranthe guttata HOM05D004543 ORTHO05D006042 2.6e-250 869.0 749 60.5
RcHm_v2.0_Chr7g0190411 Rosa chinensis HOM05D004543 ORTHO05D006042 2.6e-250 869.0 746 61.0
Eucgr.B00121 Eucalyptus grandis HOM05D004543 ORTHO05D006042 3.4e-250 868.6 748 61.0
Medtr4g103610 Medicago truncatula HOM05D004543 ORTHO05D006042 3.4e-250 868.6 747 60.4
Hund02429 Selenicereus undatus HOM05D004543 ORTHO05D006042 1.7e-249 866.3 758 60.6
Atru.chr9.1076 Acer truncatum HOM05D004543 ORTHO05D006042 2.9e-249 865.5 748 60.4
FvH4_5g08050 Fragaria vesca HOM05D004543 ORTHO05D006042 3.8e-249 865.1 760 59.9
FAN18G3295 Fragaria x ananassa HOM05D004543 ORTHO05D006042 6.4e-249 864.4 760 59.9
Potri.012G096100 Populus trichocarpa HOM05D004543 ORTHO05D006042 6.4e-249 864.4 748 61.0
Lj4g0012876 Lotus japonicus HOM05D004543 ORTHO05D006042 1.9e-248 862.8 748 59.9
Aqoxy5G03415 Aquilegia oxysepala HOM05D004543 ORTHO05D006042 2.4e-248 862.4 739 61.0
Glyma.05G047300 Glycine max HOM05D004543 ORTHO05D006042 5.4e-248 861.3 749 60.1
MD14G1158600 Malus domestica HOM05D004543 ORTHO05D006042 1.6e-247 859.8 749 59.7
FAN04G2916 Fragaria x ananassa HOM05D004543 ORTHO05D006042 2.1e-247 859.4 749 60.3
Potri.015G094000 Populus trichocarpa HOM05D004543 ORTHO05D006042 1.3e-246 856.7 743 60.8
AUR62029871 Chenopodium quinoa HOM05D004543 ORTHO05D006042 6.7e-246 854.4 753 60.2
Sabra15G0115500 Salix brachista HOM05D004543 ORTHO05D006042 1.1e-245 853.6 745 60.3
Cc07_g18860 Coffea canephora HOM05D004543 ORTHO05D006042 2.1e-244 849.4 751 59.4
EL10As4g23416 Beta vulgaris HOM05D004543 ORTHO05D006042 3.7e-244 848.6 749 60.2
Carub.0007s1621 Capsella rubella HOM05D004543 ORTHO05D006042 4.8e-244 848.2 743 60.2
Lj9C477T19 Lonicera japonica HOM05D004543 ORTHO05D006042 1.1e-243 847.0 784 57.7
THA.LOC104811593 Tarenaya hassleriana HOM05D004543 ORTHO05D006042 2.4e-243 845.9 748 59.6
Nitab4.5_0001187g0130 Nicotiana tabacum HOM05D004543 ORTHO05D006042 3.1e-243 845.5 741 60.1
AL7G28340 Arabidopsis lyrata HOM05D004543 ORTHO05D006042 1.5e-242 843.2 745 59.1
Thhalv10024490m.g Eutrema salsugineum HOM05D004543 ORTHO05D006042 2.6e-242 842.4 744 58.7
Prupe.5G152600 Prunus persica HOM05D004543 ORTHO05D006042 4.5e-242 841.6 749 58.9
CANSAT80G2145 Cannabis sativa HOM05D004543 ORTHO05D006042 7.6e-242 840.9 748 57.5
GSVIVG01008523001 Vitis vinifera HOM05D004543 ORTHO05D006042 7.6e-242 840.9 748 59.1
Oeu056011.1 Olea europaea HOM05D004543 ORTHO05D006042 9.9e-242 840.5 755 58.4
Nitab4.5_0002497g0060 Nicotiana tabacum HOM05D004543 ORTHO05D006042 1.7e-241 839.7 741 59.6
AT4G24840 Arabidopsis thaliana HOM05D004543 ORTHO05D006042 8.4e-241 837.4 745 59.3
Sopen08g002610 Solanum pennellii HOM05D004543 ORTHO05D006042 5.5e-240 834.7 740 59.6
Lsat_1_v5_gn_4_76761 Lactuca sativa HOM05D004543 ORTHO05D006042 1.2e-239 833.6 751 57.3
PGSC0003DMG400026304 Solanum tuberosum HOM05D004543 ORTHO05D006042 1.2e-239 833.6 740 59.7
Cpa.g.sc13.138 Carica papaya HOM05D004543 ORTHO05D006042 3.5e-239 832.0 748 59.8
CsaV3_6G002430 Cucumis sativus L. HOM05D004543 ORTHO05D006042 4.6e-239 831.6 761 57.4
unitig_8.g3033 Utricularia gibba HOM05D004543 ORTHO05D006042 4.6e-239 831.6 747 57.2
Hma1.2p1_1271F.1_g271760 Hydrangea macrophylla HOM05D004543 ORTHO05D006042 1.3e-238 830.1 707 60.7
ClCG11G005570 Citrullus lanatus HOM05D004543 ORTHO05D006042 6.7e-238 827.8 767 57.5
HanXRQChr09g0273071 Helianthus annuus HOM05D004543 ORTHO05D006042 8.7e-238 827.4 747 58.1
BcaC06g32853 Brassica carinata HOM05D004543 ORTHO05D006042 1.9e-237 826.2 744 58.3
BolC7t45874H Brassica oleracea HOM05D004543 ORTHO05D006042 1.9e-237 826.2 744 58.3
A01p16150 Brassica napus HOM05D004543 ORTHO05D006042 3.3e-237 825.5 744 57.5
BraA01t01551Z Brassica rapa HOM05D004543 ORTHO05D006042 3.3e-237 825.5 744 57.5
Peaxi162Scf00045g00192 Petunia axillaris HOM05D004543 ORTHO05D006042 3.7e-236 822.0 743 59.4
Sed0026192 Sechium edule HOM05D004543 ORTHO05D006042 3.7e-236 822.0 760 57.6
Sed0023388 Sechium edule HOM05D004543 ORTHO05D006042 6.2e-236 821.2 760 56.7
C01p20140 Brassica napus HOM05D004543 ORTHO05D006042 1.4e-235 820.1 746 57.2
BolC1t01943H Brassica oleracea HOM05D004543 ORTHO05D006042 1.4e-235 820.1 746 57.2
SGA_v2.0_scaffold161G37784 Striga asiatica HOM05D004543 ORTHO05D006042 2.4e-235 819.3 766 57.0
C07p53840 Brassica napus HOM05D004543 ORTHO05D006042 4.0e-235 818.5 744 57.9
Sp7g22830 Schrenkiella parvula HOM05D004543 ORTHO05D006042 5.3e-235 818.1 747 57.0
A03p55600 Brassica napus HOM05D004543 ORTHO05D006042 6.9e-235 817.8 744 57.9
BraA03t14627Z Brassica rapa HOM05D004543 ORTHO05D006042 6.9e-235 817.8 744 57.9
ECA232G1394 Erigeron canadensis HOM05D004543 ORTHO05D006042 2.0e-234 816.2 742 57.0
MELO3C025044.2 Cucumis melo HOM05D004543 ORTHO05D006042 2.9e-233 812.4 763 56.5
CAN.G906.5 Capsicum annuum HOM05D004543 ORTHO05D006042 3.8e-233 812.0 740 58.4
Carub.0003s0428 Capsella rubella HOM05D004543 ORTHO05D006042 1.9e-232 809.7 745 57.3
CDE05G1945 Ceratophyllum demersum HOM05D004543 ORTHO05D006042 3.5e-231 805.4 753 57.2
AL3G15410 Arabidopsis lyrata HOM05D004543 ORTHO05D006042 1.3e-230 803.5 739 56.0
Aa31LG7G11000 Aethionema arabicum HOM05D004543 ORTHO05D006042 3.9e-230 802.0 771 55.8
Migut.I00509 Erythranthe guttata HOM05D004543 ORTHO05D006042 5.7e-229 798.1 754 56.4
ATR0561G088 Amborella trichopoda HOM05D004543 ORTHO05D006042 1.6e-228 796.6 720 59.0
TAR622G0482 Trochodendron aralioides HOM05D004543 ORTHO05D006042 3.8e-225 785.4 688 60.9
SEGI_19802 Sequoiadendron giganteum HOM05D004543 ORTHO05D006042 2.8e-220 769.2 748 56.1
AUR62025843 Chenopodium quinoa HOM05D004543 ORTHO05D006042 1.7e-217 760.0 663 60.8
Sp6g25960 Schrenkiella parvula HOM05D004543 ORTHO05D006042 1.4e-216 756.9 742 53.8
FAN08G2446 Fragaria x ananassa HOM05D004543 ORTHO05D006042 4.7e-215 751.9 760 54.5
BcaNung06004 Brassica carinata HOM05D004543 ORTHO05D006042 1.0e-214 750.7 692 57.7
Mapoly0003s0046 Marchantia polymorpha HOM05D004543 ORTHO05D006042 1.4e-208 730.3 747 53.8
Psat0s3466g0040 Pisum sativum HOM05D004543 ORTHO05D006042 5.5e-208 728.4 627 60.4
BolC3t13508H Brassica oleracea HOM05D004543 ORTHO05D006042 1.4e-206 723.8 740 52.8
A03p08790 Brassica napus HOM05D004543 ORTHO05D006042 2.3e-206 723.0 741 52.1
C03p10280 Brassica napus HOM05D004543 ORTHO05D006042 4.4e-205 718.8 742 52.7
BraA03t10204Z Brassica rapa HOM05D004543 ORTHO05D006042 4.4e-205 718.8 742 52.7
HPP92_007000 Vanilla planifolia HOM05D004543 ORTHO05D006042 4.8e-204 715.3 748 54.1
BcaB01g05188 Brassica carinata HOM05D004543 ORTHO05D006042 1.8e-203 713.4 724 53.2
SHI28598 Sapria himalayana HOM05D004543 ORTHO05D006042 1.4e-198 697.2 813 48.0
AagrBONN_evm.TU.Sc2ySwM_344.2190 Anthoceros agrestis HOM05D004543 ORTHO05D006042 7.2e-192 674.9 742 49.2
Dinv04875 Davidia involucrata HOM05D004543 ORTHO05D006042 9.8e-189 664.5 530 64.3
Zm00001eb064480 Zea mays HOM05D004543 ORTHO05D006042 9.8e-189 664.5 383 91.1
Pp3c14_17740 Physcomitrium patens HOM05D004543 ORTHO05D006042 2.8e-188 662.9 742 49.6
Sc04g0000730 Simmondsia chinensis HOM05D004543 ORTHO05D006042 7.0e-187 658.3 536 62.3
Pp3c17_20170 Physcomitrium patens HOM05D004543 ORTHO05D006042 2.7e-186 656.4 728 50.3
TPR.G19235 Trifolium pratense HOM05D004543 ORTHO05D006042 8.0e-183 644.8 642 55.3
SMO347G0349 Selaginella moellendorffii HOM05D004543 ORTHO05D006042 6.8e-182 641.7 732 48.2
BcaNung04937 Brassica carinata HOM05D004543 ORTHO05D006042 1.7e-180 637.1 705 49.8
Rhsim08G0188800 Rhododendron simsii HOM05D004543 ORTHO05D006042 4.1e-179 632.5 528 61.6
CARHR232260 Cardamine hirsuta HOM05D004543 ORTHO05D006042 2.3e-174 616.7 534 58.8
Solyc08g006660.2 Solanum lycopersicum HOM05D004543 ORTHO05D006042 3.9e-169 599.4 517 60.9
CBR_g49627 Chara braunii HOM05D004543 ORTHO05D006042 2.4e-147 526.9 605 48.9
Sabra12G0070400 Salix brachista HOM05D004543 ORTHO05D006042 4.0e-134 483.0 373 66.2
DCAR_026221 Daucus carota HOM05D004543 ORTHO05D006042 5.8e-125 452.6 751 39.4
PRCOL_00002621 Prasinoderma coloniale HOM05D004543 ORTHO05D006042 3.3e-112 410.2 721 36.5
Manes.14G052401 Manihot esculenta HOM05D004543 ORTHO05D006042 7.0e-94 349.4 349 53.3
Medtr3g105000 Medicago truncatula HOM05D004543 ORTHO05D006042 1.1e-88 332.0 478 42.5
MCO07G105 Micromonas commoda HOM05D004543 ORTHO05D006042 3.2e-83 313.9 757 30.6
HPP92_006979 Vanilla planifolia HOM05D004543 ORTHO05D006042 4.0e-81 307.0 515 41.9
Cre09.g402750 Chlamydomonas reinhardtii HOM05D004543 ORTHO05D006042 9.7e-80 302.4 832 30.4
Hma1.2p1_0140F.1_g063450 Hydrangea macrophylla HOM05D004543 ORTHO05D006042 1.2e-66 258.8 229 56.3
Sc04g0000720 Simmondsia chinensis HOM05D004543 ORTHO05D006042 1.7e-55 221.9 210 59.5
Hma1.2p1_0140F.1_g063430 Hydrangea macrophylla HOM05D004543 ORTHO05D006042 1.6e-34 152.1 209 44.5
TPR.G18590 Trifolium pratense HOM05D001327 ORTHO05D002270 8.1e-34 149.8 124 58.9
Lsat_1_v5_gn_5_92440 Lactuca sativa HOM05D004543 ORTHO05D006042 1.4e-33 149.1 149 51.7
Medtr7g104380 Medicago truncatula HOM05D004543 ORTHO05D006042 1.6e-29 135.6 177 46.9
SEGI_01008 Sequoiadendron giganteum HOM05D004543 ORTHO05D037602 3.9e-28 131.0 112 56.2
Rhsim02G0055400 Rhododendron simsii HOM05D004543 ORTHO05D006042 5.4e-22 110.5 92 55.4
PSO675G5444 Papaver somniferum HOM05D004543 ORTHO05D010954 1.2e-21 109.4 232 36.6
Medtr3g105005 Medicago truncatula HOM05D004543 ORTHO05D006042 1.6e-21 109.0 190 40.0
TPR.G34490 Trifolium pratense HOM05D004543 ORTHO05D006042 7.3e-19 100.1 104 50.0
vmacro20276 Vaccinium macrocarpon HOM05D004543 ORTHO05D037602 7.3e-19 100.1 220 34.5
SMO301G0055 Selaginella moellendorffii HOM05D004543 ORTHO05D000231 9.6e-19 99.8 139 40.3
Rhsim05G0168000 Rhododendron simsii HOM05D003391 ORTHO05D005563 5.3e-17 94.0 78 55.1
Hma1.2p1_0140F.1_g063440 Hydrangea macrophylla HOM05D004543 ORTHO05D006042 2.0e-16 92.0 65 67.7
Rhsim04G0209800 Rhododendron simsii HOM05D004543 ORTHO05D006042 5.8e-16 90.5 80 52.5
Manes.14G052501 Manihot esculenta HOM05D004543 ORTHO05D006042 3.8e-15 87.8 206 36.4
TPR.G22932 Trifolium pratense HOM05D004543 ORTHO05D037602 1.8e-12 79.0 92 45.7
SMO117G0159 Selaginella moellendorffii HOM05D004543 ORTHO05D006042 1.1e-11 76.3 98 43.9
Lsat_1_v5_gn_3_118241 Lactuca sativa HOM05D004543 ORTHO05D001664 1.6e-10 72.4 103 42.7
Medtr1g076750 Medicago truncatula HOM05D004543 ORTHO05D006042 4.5e-08 64.3 79 46.8
SMO250G0003 Selaginella moellendorffii HOM05D004543 ORTHO05D006042 6.5e-07 60.5 67 50.7
Medtr0004s0190 Medicago truncatula HOM05D004543 ORTHO05D260927 5.5e-06 57.4 67 49.3


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