Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb210030 Zea mays HOM05D006293 ORTHO05D007971 1.1e-120 436.8 246 100.0
TAR376G0811 Trochodendron aralioides HOM05D006293 ORTHO05D007971 9.9e-29 131.3 144 48.6
QL11p047722 Quercus lobata HOM05D006293 ORTHO05D007971 1.7e-28 130.6 138 46.4
ATR0810G191 Amborella trichopoda HOM05D006293 ORTHO05D007971 2.2e-28 130.2 144 49.3
RcHm_v2.0_Chr6g0244771 Rosa chinensis HOM05D006293 ORTHO05D007971 3.8e-28 129.4 139 46.0
Cc02_g16450 Coffea canephora HOM05D006293 ORTHO05D007971 1.1e-27 127.9 136 46.3
Nn5g29105 Nelumbo nucifera HOM05D006293 ORTHO05D007971 1.4e-27 127.5 143 44.8
TWI31G0553 Tripterygium wilfordii HOM05D006293 ORTHO05D007971 1.4e-27 127.5 124 46.0
Oeu014457.2 Olea europaea HOM05D006293 ORTHO05D007971 2.4e-27 126.7 124 51.6
Nn1g05912 Nelumbo nucifera HOM05D006293 ORTHO05D007971 4.2e-27 125.9 142 45.1
TAR628G0693 Trochodendron aralioides HOM05D006293 ORTHO05D007971 4.2e-27 125.9 146 45.9
CSS0030950 Camellia sinensis var. sinensis HOM05D006293 ORTHO05D007971 5.4e-27 125.6 142 43.0
Haze_02189 Corylus avellana HOM05D006293 ORTHO05D007971 5.4e-27 125.6 135 45.2
Cfa005191 Carpinus fangiana HOM05D006293 ORTHO05D007971 7.1e-27 125.2 135 44.4
FvH4_2g01740 Fragaria vesca HOM05D006293 ORTHO05D007971 9.3e-27 124.8 139 45.3
FAN15G0431 Fragaria x ananassa HOM05D006293 ORTHO05D007971 9.3e-27 124.8 139 45.3
FAN20G1949 Fragaria x ananassa HOM05D006293 ORTHO05D007971 9.3e-27 124.8 138 46.4
FAN24G1019 Fragaria x ananassa HOM05D006293 ORTHO05D007971 9.3e-27 124.8 139 45.3
SGA_v2.0_scaffold32G13265 Striga asiatica HOM05D006293 ORTHO05D007971 9.3e-27 124.8 158 44.9
Dinv04963 Davidia involucrata HOM05D006293 ORTHO05D007971 1.2e-26 124.4 138 45.7
FAN27G2989 Fragaria x ananassa HOM05D006293 ORTHO05D007971 1.2e-26 124.4 139 45.3
Eucgr.G01761 Eucalyptus grandis HOM05D006293 ORTHO05D007971 3.5e-26 122.9 143 43.4
Gohir.D01G156200 Gossypium hirsutum HOM05D006293 ORTHO05D007971 6.0e-26 122.1 144 44.4
Gorai.002G193700 Gossypium raimondii HOM05D006293 ORTHO05D007971 6.0e-26 122.1 144 44.4
Thecc.02G066200 Theobroma cacao HOM05D006293 ORTHO05D007971 6.0e-26 122.1 146 46.6
Gohir.A01G164300 Gossypium hirsutum HOM05D006293 ORTHO05D007971 7.8e-26 121.7 146 44.5
TPR.G38570 Trifolium pratense HOM05D006293 ORTHO05D007971 7.8e-26 121.7 131 43.5
vmacro02255 Vaccinium macrocarpon HOM05D006293 ORTHO05D007971 7.8e-26 121.7 142 44.4
Rhsim11G0188600 Rhododendron simsii HOM05D006293 ORTHO05D007971 1.0e-25 121.3 152 42.1
CiPaw.05G077900 Carya illinoinensis HOM05D006293 ORTHO05D007971 1.3e-25 120.9 126 46.0
MELO3C020791.2 Cucumis melo HOM05D006293 ORTHO05D007971 1.3e-25 120.9 139 45.3
Potri.004G169200 Populus trichocarpa HOM05D006293 ORTHO05D007971 2.3e-25 120.2 147 42.9
Prupe.8G161400 Prunus persica HOM05D006293 ORTHO05D007971 2.3e-25 120.2 204 35.8
Cpa.g.sc37.182 Carica papaya HOM05D006293 ORTHO05D007971 3.0e-25 119.8 145 42.8
COL.COLO4_17266 Corchorus olitorius HOM05D006293 ORTHO05D007971 3.9e-25 119.4 147 44.9
Glyma.06G004900 Glycine max HOM05D006293 ORTHO05D007971 3.9e-25 119.4 132 46.2
Glyma.04G005100 Glycine max HOM05D006293 ORTHO05D007971 5.1e-25 119.0 124 45.2
Oeu060421.1 Olea europaea HOM05D006293 ORTHO05D007971 5.1e-25 119.0 145 42.8
VMungo1309G1166 Vigna mungo HOM05D006293 ORTHO05D007971 5.1e-25 119.0 132 44.7
MSTRG.20014 Avicennia marina HOM05D006293 ORTHO05D007971 6.6e-25 118.6 144 44.4
Duzib132G0283 Durio zibethinus HOM05D006293 ORTHO05D007971 6.6e-25 118.6 150 43.3
MSTRG.16884 Avicennia marina HOM05D006293 ORTHO05D007971 8.7e-25 118.2 146 44.5
CAN.G588.32 Capsicum annuum HOM05D006293 ORTHO05D007971 1.1e-24 117.9 148 43.9
MD10G1120000 Malus domestica HOM05D006293 ORTHO05D007971 1.1e-24 117.9 121 44.6
MBI05_g30117_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 1.5e-24 117.5 148 43.2
MD05G1116900 Malus domestica HOM05D006293 ORTHO05D007971 1.9e-24 117.1 141 42.6
Rhsim11G0188500 Rhododendron simsii HOM05D006293 ORTHO05D007971 2.5e-24 116.7 142 42.3
GSVIVG01024071001 Vitis vinifera HOM05D006293 ORTHO05D007971 2.5e-24 116.7 142 43.7
Peaxi162Scf00362g00956 Petunia axillaris HOM05D001375 ORTHO05D001222 3.3e-24 116.3 147 44.2
Medtr3g117760 Medicago truncatula HOM05D006293 ORTHO05D007971 4.3e-24 115.9 143 40.6
Manes.11G090800 Manihot esculenta HOM05D006293 ORTHO05D007971 5.6e-24 115.5 141 41.1
MBI05_g07501_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 7.3e-24 115.2 147 42.9
MBI05_g21530_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 7.3e-24 115.2 126 45.2
Phvul.009G025500 Phaseolus vulgaris HOM05D006293 ORTHO05D007971 7.3e-24 115.2 143 42.0
Solyc01g111210.3 Solanum lycopersicum HOM05D001375 ORTHO05D001222 7.3e-24 115.2 124 44.4
Sopen01g053260 Solanum pennellii HOM05D006293 ORTHO05D007971 7.3e-24 115.2 124 43.5
PGSC0003DMG400001627 Solanum tuberosum HOM05D006293 ORTHO05D007971 7.3e-24 115.2 147 41.5
MBI05_g47219_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 9.6e-24 114.8 147 42.9
Ca_15314_v3 Cicer arietinum L. HOM05D006293 ORTHO05D007971 1.3e-23 114.4 124 44.4
ClCG02G011620 Citrullus lanatus HOM05D006293 ORTHO05D007971 2.8e-23 113.2 143 42.7
Lj1g0023631 Lotus japonicus HOM05D006293 ORTHO05D007971 2.8e-23 113.2 140 41.4
Psat5g003040 Pisum sativum HOM05D006293 ORTHO05D007971 3.6e-23 112.8 128 42.2
TAR536G0014 Trochodendron aralioides HOM05D006293 ORTHO05D007971 3.6e-23 112.8 152 42.1
Migut.B00115 Erythranthe guttata HOM05D006293 ORTHO05D007971 1.1e-22 111.3 143 43.4
PSO170G2363 Papaver somniferum HOM05D006293 ORTHO05D007971 1.1e-22 111.3 147 44.2
Sed0004865 Sechium edule HOM05D006293 ORTHO05D007971 1.8e-22 110.5 139 41.0
BcaB07g31757 Brassica carinata HOM05D006293 ORTHO05D007971 3.1e-22 109.8 154 37.7
Lalb_Chr23g0265081 Lupinus albus HOM05D006293 ORTHO05D007971 9.0e-22 108.2 141 40.4
HPP92_013009 Vanilla planifolia HOM05D006293 ORTHO05D007971 9.0e-22 108.2 122 43.4
Ciclev10028711m.g Citrus clementina HOM05D006293 ORTHO05D007971 1.2e-21 107.8 145 41.4
DCAR_003705 Daucus carota HOM05D006293 ORTHO05D007971 1.2e-21 107.8 144 39.6
THA.LOC104804336 Tarenaya hassleriana HOM05D006293 ORTHO05D007971 1.2e-21 107.8 147 37.4
Aqoxy5G00988 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 2.6e-21 106.7 123 42.3
Nitab4.5_0000980g0060 Nicotiana tabacum HOM05D001375 ORTHO05D001222 2.6e-21 106.7 146 41.8
Sc14g0002130 Simmondsia chinensis HOM05D006293 ORTHO05D007971 2.6e-21 106.7 121 44.6
CANSAT25G1913 Cannabis sativa HOM05D006293 ORTHO05D007971 9.9e-21 104.8 142 39.4
CDE05G1002 Ceratophyllum demersum HOM05D006293 ORTHO05D007971 9.9e-21 104.8 141 41.8
Ah.01g009070 Amaranthus hybridus HOM05D006293 ORTHO05D007971 2.9e-20 103.2 126 40.5
Carub.0003s3038 Capsella rubella HOM05D006293 ORTHO05D007971 2.9e-20 103.2 154 36.4
BcaB03g16385 Brassica carinata HOM05D006293 ORTHO05D007971 3.8e-20 102.8 148 38.5
CARHR106850 Cardamine hirsuta HOM05D006293 ORTHO05D007971 3.8e-20 102.8 154 35.7
CsaV3_2G015780 Cucumis sativus L. HOM05D006293 ORTHO05D007971 8.4e-20 101.7 134 39.6
A07p04460 Brassica napus HOM05D006293 ORTHO05D007971 1.1e-19 101.3 148 37.8
BcaC06g36161 Brassica carinata HOM05D006293 ORTHO05D007971 1.4e-19 100.9 148 37.8
C07p07090 Brassica napus HOM05D006293 ORTHO05D007971 1.4e-19 100.9 148 37.8
C09p13060 Brassica napus HOM05D006293 ORTHO05D007971 1.4e-19 100.9 148 37.8
BolC7t41128H Brassica oleracea HOM05D006293 ORTHO05D007971 1.4e-19 100.9 148 37.8
Thhalv10022734m.g Eutrema salsugineum HOM05D006293 ORTHO05D007971 1.4e-19 100.9 147 37.4
HanXRQChr17g0557851 Helianthus annuus HOM05D006293 ORTHO05D007971 1.4e-19 100.9 150 37.3
BcaC04g23011 Brassica carinata HOM05D006293 ORTHO05D007971 1.9e-19 100.5 148 37.8
ECA233G0605 Erigeron canadensis HOM05D001375 ORTHO05D001222 1.9e-19 100.5 141 39.0
MBI05_g31848_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 1.9e-19 100.5 127 43.3
A09p11050 Brassica napus HOM05D006293 ORTHO05D007971 2.4e-19 100.1 148 37.8
BraA07t28238Z Brassica rapa HOM05D006293 ORTHO05D007971 2.4e-19 100.1 150 37.3
HanXRQChr10g0298941 Helianthus annuus HOM05D006293 ORTHO05D007971 2.4e-19 100.1 140 39.3
Sp3g30120 Schrenkiella parvula HOM05D006293 ORTHO05D007971 3.2e-19 99.8 122 40.2
BraA09t36749Z Brassica rapa HOM05D006293 ORTHO05D007971 4.2e-19 99.4 148 37.2
ECA234G1535 Erigeron canadensis HOM05D001991 ORTHO05D007971 4.2e-19 99.4 136 40.4
Hund06410 Selenicereus undatus HOM05D006293 ORTHO05D007971 4.2e-19 99.4 146 34.2
AT2G16630 Arabidopsis thaliana HOM05D006293 ORTHO05D007971 5.4e-19 99.0 142 35.9
BolC9t54199H Brassica oleracea HOM05D006293 ORTHO05D007971 5.4e-19 99.0 148 37.2
AUR62013075 Chenopodium quinoa HOM05D006293 ORTHO05D007971 9.3e-19 98.2 137 35.0
Lsat_1_v5_gn_8_126000 Lactuca sativa HOM05D006293 ORTHO05D007971 9.3e-19 98.2 142 40.8
Ah.01g022670 Amaranthus hybridus HOM05D006293 ORTHO05D007971 1.2e-18 97.8 145 37.2
AUR62010081 Chenopodium quinoa HOM05D006293 ORTHO05D007971 1.2e-18 97.8 149 34.9
AL3G49260 Arabidopsis lyrata HOM05D006293 ORTHO05D007971 1.6e-18 97.4 143 37.1
MBI05_g48109_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 1.6e-18 97.4 146 39.0
EL10Ac9g21428 Beta vulgaris HOM05D006293 ORTHO05D007971 2.1e-18 97.1 149 35.6
Lj5C183T16 Lonicera japonica HOM05D006293 ORTHO05D007971 3.5e-18 96.3 143 39.2
PSO700G0292 Papaver somniferum HOM05D006293 ORTHO05D007971 6.0e-18 95.5 130 44.6
Aa31LG8G13900 Aethionema arabicum HOM05D006293 ORTHO05D007971 1.3e-17 94.4 142 37.3
SEGI_19356 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 8.7e-17 91.7 135 36.3
PGR042G0330 Punica granatum HOM05D006293 ORTHO05D007971 1.1e-14 84.7 133 36.8
unitig_0.g827 Utricularia gibba HOM05D006293 ORTHO05D007971 2.4e-14 83.6 98 42.9
SEGI_14996 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 1.7e-12 77.4 141 32.6
SEGI_23181 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 6.4e-12 75.5 141 32.6
Mapoly0014s0128 Marchantia polymorpha HOM05D006293 ORTHO05D007971 1.4e-11 74.3 149 32.9
Dinv41970 Davidia involucrata HOM05D006293 ORTHO05D007971 1.6e-10 70.9 91 40.7
Aqoxy1G01171 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 7.9e-10 68.6 82 39.0
unitig_0.g43 Utricularia gibba HOM05D006293 ORTHO05D007971 1.8e-09 67.4 140 35.0
SMO223G0025 Selaginella moellendorffii HOM05D006293 ORTHO05D007971 8.7e-09 65.1 131 29.8
Os02g0101900 Oryza sativa ssp. japonica HOM05D006293 ORTHO05D007971 1.3e-07 61.2 26 100.0
Actinidia00600 Actinidia chinensis HOM05D006293 ORTHO05D007971 6.2e-07 58.9 60 50.0


User provided reference genes

Program Settings