Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb209010 Zea mays HOM05D005895 ORTHO05D007916 5.1e-307 1057.0 556 100.0
Zm00001eb231230 Zea mays HOM05D005895 ORTHO05D007916 2.5e-282 974.9 589 85.7
Os02g0131200 Oryza sativa ssp. japonica HOM05D005895 ORTHO05D007916 2.7e-244 848.6 589 76.4
GSVIVG01004086001 Vitis vinifera HOM05D005895 ORTHO05D007916 7.3e-197 691.0 597 62.5
MBI10_g00734_MAGBIO Magnolia biondii HOM05D005895 ORTHO05D007916 4.0e-195 685.3 548 65.5
TAR371G0306 Trochodendron aralioides HOM05D005895 ORTHO05D007916 2.6e-194 682.6 525 66.7
Ah.03g133150 Amaranthus hybridus HOM05D005895 ORTHO05D007916 3.4e-194 682.2 533 64.7
Haze_12237 Corylus avellana HOM05D005895 ORTHO05D007916 7.6e-194 681.0 553 64.6
Gohir.A04G136400 Gossypium hirsutum HOM05D005895 ORTHO05D007916 2.2e-193 679.5 551 63.2
CSS0018548 Camellia sinensis var. sinensis HOM05D005895 ORTHO05D007916 3.8e-193 678.7 523 66.2
Gorai.012G172600 Gossypium raimondii HOM05D005895 ORTHO05D007916 6.4e-193 677.9 551 63.2
Hund06020 Selenicereus undatus HOM05D005895 ORTHO05D007916 6.4e-193 677.9 551 63.7
Cfa009199 Carpinus fangiana HOM05D005895 ORTHO05D007916 1.4e-192 676.8 551 63.9
Eucgr.H02516 Eucalyptus grandis HOM05D005895 ORTHO05D007916 1.9e-192 676.4 590 62.2
Actinidia27801 Actinidia chinensis HOM05D005895 ORTHO05D007916 2.4e-192 676.0 519 66.9
CiPaw.05G183400 Carya illinoinensis HOM05D005895 ORTHO05D007916 2.4e-192 676.0 523 64.8
COL.COLO4_24246 Corchorus olitorius HOM05D005895 ORTHO05D007916 2.4e-192 676.0 581 62.0
CANSAT01G2589 Cannabis sativa HOM05D005895 ORTHO05D007916 5.4e-192 674.9 599 60.4
AUR62024296 Chenopodium quinoa HOM05D005895 ORTHO05D007916 5.4e-192 674.9 594 60.4
AL2G29960 Arabidopsis lyrata HOM05D005895 ORTHO05D007916 9.3e-192 674.1 552 62.7
EL10Ac6g13787 Beta vulgaris HOM05D005895 ORTHO05D007916 1.2e-191 673.7 561 62.6
THA.LOC104822982 Tarenaya hassleriana HOM05D005895 ORTHO05D007916 2.7e-191 672.5 550 64.4
Potri.010G044900 Populus trichocarpa HOM05D005895 ORTHO05D007916 3.5e-191 672.2 592 60.5
BcaB05g24593 Brassica carinata HOM05D005895 ORTHO05D007916 1.7e-190 669.8 546 63.4
Lj6A811T72 Lonicera japonica HOM05D005895 ORTHO05D007916 1.7e-190 669.8 552 63.6
AUR62005446 Chenopodium quinoa HOM05D005895 ORTHO05D007916 3.0e-190 669.1 582 60.3
Ciclev10030909m.g Citrus clementina HOM05D005895 ORTHO05D007916 3.0e-190 669.1 525 64.8
RcHm_v2.0_Chr4g0433361 Rosa chinensis HOM05D005895 ORTHO05D007916 3.0e-190 669.1 593 60.4
Sp5g25720 Schrenkiella parvula HOM05D005895 ORTHO05D007916 3.0e-190 669.1 551 62.8
QL03p058522 Quercus lobata HOM05D005895 ORTHO05D007916 3.9e-190 668.7 525 65.1
Thecc.02G257400 Theobroma cacao HOM05D005895 ORTHO05D007916 5.1e-190 668.3 554 63.0
CAN.G7.20 Capsicum annuum HOM05D005895 ORTHO05D007916 6.6e-190 667.9 524 65.3
AT1G70570 Arabidopsis thaliana HOM05D005895 ORTHO05D007916 8.7e-190 667.5 551 62.6
A02p16660 Brassica napus HOM05D005895 ORTHO05D007916 8.7e-190 667.5 547 63.3
Carub.0002s1729 Capsella rubella HOM05D005895 ORTHO05D007916 8.7e-190 667.5 551 62.8
MELO3C011963.2 Cucumis melo HOM05D005895 ORTHO05D007916 8.7e-190 667.5 523 64.8
HPP92_003081 Vanilla planifolia HOM05D005895 ORTHO05D007916 8.7e-190 667.5 520 66.5
DCAR_007061 Daucus carota HOM05D005895 ORTHO05D007916 1.1e-189 667.2 561 61.5
C02p27920 Brassica napus HOM05D005895 ORTHO05D007916 1.5e-189 666.8 547 63.1
BolC2t08837H Brassica oleracea HOM05D005895 ORTHO05D007916 1.5e-189 666.8 547 63.1
BraA02t06722Z Brassica rapa HOM05D005895 ORTHO05D007916 1.5e-189 666.8 547 63.3
Sabra10G0023200 Salix brachista HOM05D005895 ORTHO05D007916 2.5e-189 666.0 566 60.8
Solyc04g025540.3 Solanum lycopersicum HOM05D005895 ORTHO05D007916 2.5e-189 666.0 523 65.4
Atru.chr11.2117 Acer truncatum HOM05D005895 ORTHO05D007916 5.6e-189 664.8 527 65.1
TWI36G0590 Tripterygium wilfordii HOM05D005895 ORTHO05D007916 5.6e-189 664.8 552 62.7
Atru.chr11.2133 Acer truncatum HOM05D005895 ORTHO05D007916 7.3e-189 664.5 527 65.1
Aa31LG4G10380 Aethionema arabicum HOM05D005895 ORTHO05D007916 7.3e-189 664.5 554 61.7
Cc04_g11160 Coffea canephora HOM05D005895 ORTHO05D007916 7.3e-189 664.5 524 65.3
Thhalv10018314m.g Eutrema salsugineum HOM05D005895 ORTHO05D007916 6.2e-188 661.4 552 61.8
FvH4_4g25910 Fragaria vesca HOM05D005895 ORTHO05D007916 6.2e-188 661.4 520 64.0
Sopen04g012770 Solanum pennellii HOM05D005895 ORTHO05D007916 6.2e-188 661.4 592 60.3
Migut.E00194 Erythranthe guttata HOM05D005895 ORTHO05D007916 8.1e-188 661.0 547 62.9
PGR119G2505 Punica granatum HOM05D005895 ORTHO05D007916 1.4e-187 660.2 594 60.1
SalBow8G2958 Salvia bowleyana HOM05D005895 ORTHO05D007916 1.4e-187 660.2 528 63.6
FAN07G1086 Fragaria x ananassa HOM05D005895 ORTHO05D007916 2.4e-187 659.4 520 63.8
MD13G1098000 Malus domestica HOM05D005895 ORTHO05D007916 3.1e-187 659.1 526 62.9
Prupe.1G247400 Prunus persica HOM05D005895 ORTHO05D007916 4.0e-187 658.7 557 61.9
CARHR063780 Cardamine hirsuta HOM05D005895 ORTHO05D007916 6.9e-187 657.9 551 61.5
Glyma.08G283100 Glycine max HOM05D005895 ORTHO05D007916 6.9e-187 657.9 526 63.9
PSO478G2260 Papaver somniferum HOM05D005895 ORTHO05D007916 1.2e-186 657.1 524 64.5
VMungo0251G0514 Vigna mungo HOM05D005895 ORTHO05D007916 1.5e-186 656.8 518 63.7
CsaV3_5G031240 Cucumis sativus L. HOM05D005895 ORTHO05D007916 2.0e-186 656.4 550 61.5
arahy.Tifrunner.gnm1.ann1.LQ91H7 Arachis hypogaea HOM05D005895 ORTHO05D007916 2.6e-186 656.0 521 63.7
Cpa.g.sc33.4 Carica papaya HOM05D005895 ORTHO05D007916 5.8e-186 654.8 539 63.3
MD16G1098900 Malus domestica HOM05D005895 ORTHO05D007916 5.8e-186 654.8 580 58.8
PSO017G6602 Papaver somniferum HOM05D005895 ORTHO05D007916 5.8e-186 654.8 524 64.3
Gohir.D04G179500 Gossypium hirsutum HOM05D005895 ORTHO05D007916 7.6e-186 654.4 532 63.7
Sed0023548 Sechium edule HOM05D005895 ORTHO05D007916 7.6e-186 654.4 526 63.9
BcaC03g15207 Brassica carinata HOM05D005895 ORTHO05D007916 9.9e-186 654.1 534 63.5
HanXRQChr08g0208071 Helianthus annuus HOM05D005895 ORTHO05D007916 9.9e-186 654.1 525 66.5
ECA233G5390 Erigeron canadensis HOM05D005895 ORTHO05D007916 1.3e-185 653.7 526 63.3
TPR.G34672 Trifolium pratense HOM05D005895 ORTHO05D007916 3.8e-185 652.1 550 61.8
FAN12G2739 Fragaria x ananassa HOM05D005895 ORTHO05D007916 7.1e-184 647.9 519 63.2
FAN12G1268 Fragaria x ananassa HOM05D005895 ORTHO05D007916 1.6e-183 646.7 520 63.3
Medtr8g069525 Medicago truncatula HOM05D005895 ORTHO05D007916 1.6e-183 646.7 551 61.3
vmacro01130 Vaccinium macrocarpon HOM05D005895 ORTHO05D007916 2.7e-183 646.0 631 57.5
FAN17G0264 Fragaria x ananassa HOM05D005895 ORTHO05D007916 1.3e-182 643.7 551 60.3
Aqoxy5G03807 Aquilegia oxysepala HOM05D005895 ORTHO05D007916 1.8e-182 643.3 524 63.7
FAN22G0931 Fragaria x ananassa HOM05D005895 ORTHO05D007916 3.0e-182 642.5 547 60.5
Lalb_Chr05g0228401 Lupinus albus HOM05D005895 ORTHO05D007916 3.0e-182 642.5 519 62.6
Lj4g0008127 Lotus japonicus HOM05D005895 ORTHO05D007916 3.9e-182 642.1 551 61.2
Gorai.005G179700 Gossypium raimondii HOM05D005895 ORTHO05D007916 2.5e-181 639.4 525 63.0
Aqoxy3G01161 Aquilegia oxysepala HOM05D005895 ORTHO05D007916 2.8e-180 636.0 531 61.0
Sc04g0009430 Simmondsia chinensis HOM05D005895 ORTHO05D007916 6.9e-179 631.3 573 60.4
Nn4g22655 Nelumbo nucifera HOM05D005895 ORTHO05D007916 6.7e-174 614.8 556 59.7
ATR0585G083 Amborella trichopoda HOM05D005895 ORTHO05D007916 1.9e-173 613.2 580 59.0
Nitab4.5_0006332g0030 Nicotiana tabacum HOM05D005895 ORTHO05D007916 3.2e-168 595.9 589 55.3
Gohir.D02G159600 Gossypium hirsutum HOM05D005895 ORTHO05D007916 5.5e-168 595.1 525 60.6
ClCG05G025660 Citrullus lanatus HOM05D005895 ORTHO05D007916 2.3e-166 589.7 550 58.4
Lsat_1_v5_gn_8_150700 Lactuca sativa HOM05D005895 ORTHO05D007916 1.5e-165 587.0 525 59.8
Phvul.003G063900 Phaseolus vulgaris HOM05D005895 ORTHO05D007916 3.7e-164 582.4 460 63.7
MSTRG.2417 Avicennia marina HOM05D005895 ORTHO05D007916 3.2e-160 569.3 444 63.5
Duzib251G0200 Durio zibethinus HOM05D005895 ORTHO05D007916 6.1e-159 565.1 515 58.6
Manes.12G024300 Manihot esculenta HOM05D005895 ORTHO05D007916 2.8e-156 556.2 471 60.9
arahy.Tifrunner.gnm1.ann1.0I87EX Arachis hypogaea HOM05D005895 ORTHO05D007916 1.8e-155 553.5 448 62.3
Nitab4.5_0000370g0030 Nicotiana tabacum HOM05D005895 ORTHO05D007916 3.1e-155 552.7 524 56.5
Mapoly0129s0050 Marchantia polymorpha HOM05D005895 ORTHO05D007916 1.2e-154 550.8 510 57.8
Manes.13G025800 Manihot esculenta HOM05D005895 ORTHO05D007916 4.5e-154 548.9 516 58.7
Psat0s3772g0040 Pisum sativum HOM05D005895 ORTHO05D007916 3.8e-153 545.8 447 62.0
Oeu059911.1 Olea europaea HOM05D005895 ORTHO05D007916 9.4e-152 541.2 510 58.4
Ca_22578_v3 Cicer arietinum L. HOM05D005895 ORTHO05D007916 6.1e-151 538.5 447 61.5
THA.LOC104818151 Tarenaya hassleriana HOM05D005895 ORTHO05D007916 2.3e-150 536.6 449 63.5
Gohir.A03G136300 Gossypium hirsutum HOM05D005895 ORTHO05D007916 4.1e-147 525.8 489 57.5
unitig_52.g17177 Utricularia gibba HOM05D005895 ORTHO05D007916 1.3e-145 520.8 517 54.2
Pp3c12_14340 Physcomitrium patens HOM05D005895 ORTHO05D007916 8.5e-145 518.1 547 52.8
SMO119G0060 Selaginella moellendorffii HOM05D005895 ORTHO05D007916 6.7e-142 508.4 549 51.9
Sed0009772 Sechium edule HOM05D005895 ORTHO05D007916 2.0e-141 506.9 424 61.3
Peaxi162Scf01242g00143 Petunia axillaris HOM05D005895 ORTHO05D007916 1.3e-140 504.2 385 67.0
AagrBONN_evm.TU.Sc2ySwM_368.1304 Anthoceros agrestis HOM05D005895 ORTHO05D007916 8.8e-126 454.9 446 54.7
Dinv24803 Davidia involucrata HOM05D005895 ORTHO05D007916 1.4e-107 394.4 390 56.4
Pp3c10_19590 Physcomitrium patens HOM05D005895 ORTHO05D007916 2.7e-90 337.0 372 49.7
SHI17741 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-79 299.7 253 58.5
FAN18G3006 Fragaria x ananassa HOM05D005895 ORTHO05D007916 8.2e-55 219.2 200 56.5
CBR_g37584 Chara braunii HOM05D000019 ORTHO05D000048 1.6e-47 194.9 208 49.5
SEGI_05407 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 3.1e-46 190.7 148 66.9
CBR_g37586 Chara braunii HOM05D000019 ORTHO05D000048 3.6e-42 177.2 274 41.6
Peaxi162Scf02256g00001 Petunia axillaris HOM05D005895 ORTHO05D007916 4.1e-38 163.7 134 62.7
SEGI_08481 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 3.7e-31 140.6 109 61.5
BcaB08g34808 Brassica carinata HOM05D005895 ORTHO05D007916 8.2e-31 139.4 102 63.7
Rhsim12G0041200 Rhododendron simsii HOM05D005895 ORTHO05D007916 2.7e-18 97.8 69 65.2
SEGI_24305 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 3.6e-18 97.4 68 64.7
BcaB05g24594 Brassica carinata HOM05D005895 ORTHO05D012801 6.1e-18 96.7 72 62.5
A02p16670 Brassica napus HOM05D005895 ORTHO05D012801 1.3e-15 89.0 68 61.8
BraA02t06723Z Brassica rapa HOM05D005895 ORTHO05D012801 1.3e-15 89.0 68 61.8
SMO163G0072 Selaginella moellendorffii HOM05D005895 ORTHO05D007916 1.8e-14 85.1 136 39.0
C02p27930 Brassica napus HOM05D005895 ORTHO05D012801 2.4e-14 84.7 67 61.2
BolC2t08838H Brassica oleracea HOM05D005895 ORTHO05D012801 2.4e-14 84.7 67 61.2
Gorai.012G172500 Gossypium raimondii HOM05D005895 ORTHO05D007916 5.9e-13 80.1 53 69.8
DCAR_029453 Daucus carota HOM05D005895 ORTHO05D007916 2.5e-11 74.7 54 61.1
CSS0038190 Camellia sinensis var. sinensis HOM05D033929 ORTHO05D026310 9.8e-08 62.8 45 64.4
SEGI_38231 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 9.1e-06 56.2 38 65.8


User provided reference genes

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