Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb199280 Zea mays HOM05D000853 ORTHO05D446641 4.2e-68 261.5 164 100.0
Zm00001eb033650 Zea mays HOM05D000853 ORTHO05D000723 1.9e-23 113.2 113 59.3
Rhsim12G0070800 Rhododendron simsii HOM05D000853 ORTHO05D000723 3.1e-10 69.3 113 38.9
Haze_11852 Corylus avellana HOM05D000853 ORTHO05D000723 4.0e-10 68.9 113 38.1
Actinidia24042 Actinidia chinensis HOM05D000853 ORTHO05D000723 5.2e-10 68.6 117 38.5
DCAR_023739 Daucus carota HOM05D000853 ORTHO05D000723 5.2e-10 68.6 113 38.9
COL.COLO4_27846 Corchorus olitorius HOM05D000853 ORTHO05D000723 9.0e-10 67.8 113 38.1
MD16G1054800 Malus domestica HOM05D000853 ORTHO05D000723 1.2e-09 67.4 117 37.6
Actinidia31924 Actinidia chinensis HOM05D000853 ORTHO05D000723 1.5e-09 67.0 117 37.6
Cfa008840 Carpinus fangiana HOM05D000853 ORTHO05D000723 1.5e-09 67.0 115 37.4
FAN17G2478 Fragaria x ananassa HOM05D000853 ORTHO05D000723 1.5e-09 67.0 113 36.3
FAN22G2160 Fragaria x ananassa HOM05D000853 ORTHO05D000723 1.5e-09 67.0 113 36.3
MD13G1055700 Malus domestica HOM05D000853 ORTHO05D000723 1.5e-09 67.0 113 37.2
Ciclev10032151m.g Citrus clementina HOM05D000853 ORTHO05D000723 2.0e-09 66.6 113 38.1
FAN12G1685 Fragaria x ananassa HOM05D000853 ORTHO05D000723 2.0e-09 66.6 113 36.3
HanXRQChr16g0528581 Helianthus annuus HOM05D000853 ORTHO05D000723 2.6e-09 66.2 113 36.3
CSS0005887 Camellia sinensis var. sinensis HOM05D000853 ORTHO05D000723 3.4e-09 65.9 113 35.4
Eucgr.B03112 Eucalyptus grandis HOM05D000853 ORTHO05D000723 3.4e-09 65.9 117 38.5
Prupe.1G295200 Prunus persica HOM05D000853 ORTHO05D000723 4.4e-09 65.5 113 37.2
DCAR_026690 Daucus carota HOM05D000853 ORTHO05D000723 5.8e-09 65.1 113 37.2
FvH4_4g29150 Fragaria vesca HOM05D000853 ORTHO05D000723 5.8e-09 65.1 113 36.3
Psat2g087600 Pisum sativum HOM05D000853 ORTHO05D000723 5.8e-09 65.1 117 38.5
vmacro01294 Vaccinium macrocarpon HOM05D000853 ORTHO05D000723 5.8e-09 65.1 117 38.5
COL.COLO4_27780 Corchorus olitorius HOM05D000853 ORTHO05D000723 7.6e-09 64.7 113 36.3
Gohir.A12G159000 Gossypium hirsutum HOM05D000853 ORTHO05D000723 7.6e-09 64.7 117 37.6
Gohir.D12G162200 Gossypium hirsutum HOM05D000853 ORTHO05D000723 7.6e-09 64.7 117 37.6
Gorai.008G174900 Gossypium raimondii HOM05D000853 ORTHO05D000723 7.6e-09 64.7 117 37.6
MBI15_g39486_MAGBIO Magnolia biondii HOM05D000853 ORTHO05D000723 7.6e-09 64.7 117 38.5
MBI15_g22411_MAGBIO Magnolia biondii HOM05D000853 ORTHO05D000723 9.9e-09 64.3 117 38.5
AUR62007861 Chenopodium quinoa HOM05D000853 ORTHO05D000723 1.3e-08 63.9 113 37.2
Oeu024148.1 Olea europaea HOM05D000853 ORTHO05D000723 1.3e-08 63.9 59 50.8
Cpa.g.sc1.173 Carica papaya HOM05D000853 ORTHO05D000723 1.7e-08 63.5 117 36.8
Oeu021811.1 Olea europaea HOM05D000853 ORTHO05D000723 1.7e-08 63.5 117 38.5
MSTRG.2285 Avicennia marina HOM05D000853 ORTHO05D000723 2.2e-08 63.2 117 36.8
CSS0017462 Camellia sinensis var. sinensis HOM05D000853 ORTHO05D000723 2.2e-08 63.2 113 35.4
Duzib268G1383 Durio zibethinus HOM05D000853 ORTHO05D000723 2.2e-08 63.2 117 35.9
Migut.L01156 Erythranthe guttata HOM05D000853 ORTHO05D000723 2.2e-08 63.2 117 38.5
Gohir.D04G189800 Gossypium hirsutum HOM05D000853 ORTHO05D000723 2.2e-08 63.2 115 35.7
Sabra10G0105900 Salix brachista HOM05D000853 ORTHO05D000723 2.2e-08 63.2 113 34.5
SGA_v2.0_scaffold16G07833 Striga asiatica HOM05D000853 ORTHO05D000723 2.2e-08 63.2 113 38.1
ECA234G3151 Erigeron canadensis HOM05D000853 ORTHO05D000723 2.9e-08 62.8 113 35.4
Thecc.02G321200 Theobroma cacao HOM05D000853 ORTHO05D000723 2.9e-08 62.8 117 36.8
AL1G25420 Arabidopsis lyrata HOM05D000853 ORTHO05D000723 3.8e-08 62.4 117 34.2
PGR102G0919 Punica granatum HOM05D000853 ORTHO05D000723 3.8e-08 62.4 117 33.3
Sc04g0007300 Simmondsia chinensis HOM05D000853 ORTHO05D000723 3.8e-08 62.4 113 36.3
TWI31G1412 Tripterygium wilfordii HOM05D000853 ORTHO05D000723 3.8e-08 62.4 117 35.0
TAR629G2116 Trochodendron aralioides HOM05D000853 ORTHO05D000723 3.8e-08 62.4 117 35.9
Atru.chr11.1546 Acer truncatum HOM05D000853 ORTHO05D000723 4.9e-08 62.0 113 36.3
AT1G13635 Arabidopsis thaliana HOM05D000853 ORTHO05D000723 4.9e-08 62.0 117 35.0
Lalb_Chr17g0341521 Lupinus albus HOM05D000853 ORTHO05D000723 4.9e-08 62.0 113 35.4
Manes.14G091000 Manihot esculenta HOM05D000853 ORTHO05D000723 4.9e-08 62.0 117 35.9
Medtr0009s0230 Medicago truncatula HOM05D000853 ORTHO05D000723 4.9e-08 62.0 113 36.3
ECA246G0623 Erigeron canadensis HOM05D000853 ORTHO05D000723 6.4e-08 61.6 114 36.0
Gohir.A04G145300 Gossypium hirsutum HOM05D000853 ORTHO05D000723 6.4e-08 61.6 113 34.5
Lj6A773T127 Lonicera japonica HOM05D000853 ORTHO05D000723 6.4e-08 61.6 127 35.4
Ah.03g137450 Amaranthus hybridus HOM05D000853 ORTHO05D000723 8.4e-08 61.2 113 37.2
CiPaw.05G120800 Carya illinoinensis HOM05D000853 ORTHO05D000723 8.4e-08 61.2 113 33.6
Glyma.02G123800 Glycine max HOM05D000853 ORTHO05D000723 8.4e-08 61.2 113 34.5
Phvul.003G037100 Phaseolus vulgaris HOM05D000853 ORTHO05D000723 8.4e-08 61.2 51 51.0
Sabra08G0085100 Salix brachista HOM05D000853 ORTHO05D000723 8.4e-08 61.2 113 33.6
THA.LOC104805218 Tarenaya hassleriana HOM05D000853 ORTHO05D000723 8.4e-08 61.2 117 35.0
Lalb_Chr05g0228991 Lupinus albus HOM05D000853 ORTHO05D000723 1.1e-07 60.8 117 36.8
Manes.06G078800 Manihot esculenta HOM05D000853 ORTHO05D000723 1.1e-07 60.8 118 36.4
Medtr8g066040 Medicago truncatula HOM05D000853 ORTHO05D000723 1.1e-07 60.8 129 33.3
TPR.G14376 Trifolium pratense HOM05D000853 ORTHO05D000723 1.1e-07 60.8 130 33.8
EL10Ac6g14661 Beta vulgaris HOM05D000853 ORTHO05D000723 1.4e-07 60.5 51 54.9
BcaB02g06460 Brassica carinata HOM05D000853 ORTHO05D000723 1.4e-07 60.5 117 33.3
BcaC05g25270 Brassica carinata HOM05D000853 ORTHO05D000723 1.4e-07 60.5 117 34.2
Ca_22866_v3 Cicer arietinum L. HOM05D000853 ORTHO05D000723 1.4e-07 60.5 117 35.0
Duzib251G0038 Durio zibethinus HOM05D000853 ORTHO05D000723 1.4e-07 60.5 117 36.8
Potri.010G137300 Populus trichocarpa HOM05D000853 ORTHO05D000723 1.4e-07 60.5 117 34.2
arahy.Tifrunner.gnm1.ann1.W2YUTZ Arachis hypogaea HOM05D000853 ORTHO05D000723 1.9e-07 60.1 113 34.5
AUR62003050 Chenopodium quinoa HOM05D000853 ORTHO05D000723 1.9e-07 60.1 113 32.7
Nn4g23556 Nelumbo nucifera HOM05D000853 ORTHO05D002123 1.9e-07 60.1 117 35.0
VMungo1215G0880 Vigna mungo HOM05D000853 ORTHO05D000723 1.9e-07 60.1 117 35.0
CSS0044885 Camellia sinensis var. sinensis HOM05D000853 ORTHO05D000723 2.4e-07 59.7 48 52.1
ClCG05G023500 Citrullus lanatus HOM05D000853 ORTHO05D000723 2.4e-07 59.7 113 33.6
Thhalv10008250m.g Eutrema salsugineum HOM05D000853 ORTHO05D000723 2.4e-07 59.7 117 33.3
Gorai.012G185200 Gossypium raimondii HOM05D000853 ORTHO05D000723 2.4e-07 59.7 115 34.8
Psat0s1938g0040 Pisum sativum HOM05D000853 ORTHO05D000723 2.4e-07 59.7 117 35.0
Psat0s1938g0080 Pisum sativum HOM05D000853 ORTHO05D000723 2.4e-07 59.7 117 35.0
VMungo1215G1885 Vigna mungo HOM05D000853 ORTHO05D000723 2.4e-07 59.7 51 51.0
arahy.Tifrunner.gnm1.ann1.G4VJTK Arachis hypogaea HOM05D000853 ORTHO05D000723 3.2e-07 59.3 113 33.6
CARHR014010 Cardamine hirsuta HOM05D000853 ORTHO05D000723 3.2e-07 59.3 117 33.3
Lj4g0001255 Lotus japonicus HOM05D000853 ORTHO05D000723 3.2e-07 59.3 117 34.2
Phvul.003G035100 Phaseolus vulgaris HOM05D000853 ORTHO05D000723 3.2e-07 59.3 117 34.2
Aqoxy3G00563 Aquilegia oxysepala HOM05D000853 ORTHO05D000723 4.2e-07 58.9 117 35.0
CANSAT64G0078 Cannabis sativa HOM05D000853 ORTHO05D000723 4.2e-07 58.9 117 35.0
Cc11_g11470 Coffea canephora HOM05D000853 ORTHO05D000723 5.4e-07 58.5 113 33.6
MELO3C012172.2 Cucumis melo HOM05D000853 ORTHO05D000723 5.4e-07 58.5 117 34.2
CsaV3_5G033540 Cucumis sativus L. HOM05D000853 ORTHO05D000723 5.4e-07 58.5 117 33.3
Glyma.08G263200 Glycine max HOM05D000853 ORTHO05D000723 5.4e-07 58.5 117 34.2
Lsat_1_v5_gn_4_21020 Lactuca sativa HOM05D000853 ORTHO05D000723 5.4e-07 58.5 113 33.6
Aa31LG1G1300 Aethionema arabicum HOM05D000853 ORTHO05D000723 9.3e-07 57.8 117 33.3
Carub.0001s1336 Capsella rubella HOM05D000853 ORTHO05D000723 9.3e-07 57.8 117 32.5
Glyma.01G082000 Glycine max HOM05D000853 ORTHO05D000723 9.3e-07 57.8 117 34.2
TAR371G0166 Trochodendron aralioides HOM05D000853 ORTHO05D000723 9.3e-07 57.8 117 35.0
PSO017G1129 Papaver somniferum HOM05D000853 ORTHO05D000723 1.2e-06 57.4 117 35.9
PSO478G2868 Papaver somniferum HOM05D000853 ORTHO05D000723 1.2e-06 57.4 117 35.9
Sp1g12280 Schrenkiella parvula HOM05D000853 ORTHO05D000723 1.2e-06 57.4 117 32.5
GSVIVG01010109001 Vitis vinifera HOM05D000853 ORTHO05D000723 1.2e-06 57.4 49 51.0
arahy.Tifrunner.gnm1.ann1.8BYJ1V Arachis hypogaea HOM05D000853 ORTHO05D000723 1.6e-06 57.0 49 51.0
arahy.Tifrunner.gnm1.ann1.N974ZF Arachis hypogaea HOM05D000853 ORTHO05D000723 2.7e-06 56.2 51 49.0
arahy.Tifrunner.gnm1.ann1.UMYN8D Arachis hypogaea HOM05D000853 ORTHO05D000723 2.7e-06 56.2 51 49.0
BolC5t29897H Brassica oleracea HOM05D000853 ORTHO05D000723 3.5e-06 55.8 114 33.3
SGA_v2.0_scaffold287G47195 Striga asiatica HOM05D000853 ORTHO05D000723 3.5e-06 55.8 117 33.3
Potri.008G112300 Populus trichocarpa HOM05D000853 ORTHO05D000723 4.6e-06 55.5 49 49.0
Sed0022309 Sechium edule HOM05D000853 ORTHO05D000723 4.6e-06 55.5 117 32.5
Oeu055073.1 Olea europaea HOM05D000853 ORTHO05D000723 7.8e-06 54.7 49 49.0


User provided reference genes

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