Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb190230 Zea mays HOM05D006794 ORTHO05D008322 2.0e-98 362.5 187 100.0
Os02g0733400 Oryza sativa ssp. japonica HOM05D006794 ORTHO05D008322 2.6e-29 132.9 195 50.8
Os06g0256800 Oryza sativa ssp. japonica HOM05D006794 ORTHO05D008322 1.6e-15 87.0 206 38.8
Thecc.03G058000 Theobroma cacao HOM05D006794 ORTHO05D008322 1.1e-11 74.3 214 37.4
GSVIVG01008463001 Vitis vinifera HOM05D006794 ORTHO05D008322 1.2e-10 70.9 199 38.2
CiPaw.16G095900 Carya illinoinensis HOM05D006794 ORTHO05D008322 1.6e-10 70.5 213 34.3
CiPaw.15G144200 Carya illinoinensis HOM05D006794 ORTHO05D008322 2.1e-10 70.1 206 35.9
Gorai.008G290400 Gossypium raimondii HOM05D006794 ORTHO05D008322 4.6e-10 68.9 214 34.6
THA.LOC104825595 Tarenaya hassleriana HOM05D006794 ORTHO05D008322 7.8e-10 68.2 189 37.0
FAN13G2800 Fragaria x ananassa HOM05D006794 ORTHO05D008322 1.3e-09 67.4 201 38.3
QL10p030576 Quercus lobata HOM05D006794 ORTHO05D008322 3.0e-09 66.2 199 33.7
Lalb_Chr16g0386961 Lupinus albus HOM05D006794 ORTHO05D008322 3.9e-09 65.9 202 34.7
Sed0017400 Sechium edule HOM05D000034 ORTHO05D000037 8.6e-09 64.7 188 36.2
arahy.Tifrunner.gnm1.ann1.KQ26AL Arachis hypogaea HOM05D006794 ORTHO05D008322 1.1e-08 64.3 192 33.3
arahy.Tifrunner.gnm1.ann1.P2R0G6 Arachis hypogaea HOM05D006794 ORTHO05D008322 1.1e-08 64.3 192 33.3
ClCG04G010570 Citrullus lanatus HOM05D006794 ORTHO05D008322 1.1e-08 64.3 190 34.7
Cfa021396 Carpinus fangiana HOM05D006794 ORTHO05D008322 1.5e-08 63.9 203 36.0
Duzib068G0617 Durio zibethinus HOM05D006794 ORTHO05D008322 1.5e-08 63.9 216 33.3
MBI19_g22477_MAGBIO Magnolia biondii HOM05D006794 ORTHO05D008322 1.5e-08 63.9 195 37.9
MD14G1237200 Malus domestica HOM05D006794 ORTHO05D008322 5.6e-08 62.0 205 37.6
MD01G1007300 Malus domestica HOM05D006794 ORTHO05D008322 1.2e-07 60.8 191 34.6
Phvul.002G330800 Phaseolus vulgaris HOM05D006794 ORTHO05D008322 1.2e-07 60.8 195 36.9
Oeu046160.1 Olea europaea HOM05D006794 ORTHO05D008322 2.1e-07 60.1 140 39.3
Nn4g24277 Nelumbo nucifera HOM05D006794 ORTHO05D008322 2.8e-07 59.7 207 34.8
HPP92_008000 Vanilla planifolia HOM05D006794 ORTHO05D008322 2.8e-07 59.7 202 35.1
Dinv08202 Davidia involucrata HOM05D006794 ORTHO05D008322 3.6e-07 59.3 197 34.5
Sp3g16080 Schrenkiella parvula HOM05D006794 ORTHO05D008322 6.2e-07 58.5 224 32.6
Prupe.5G234500 Prunus persica HOM05D006794 ORTHO05D008322 8.1e-07 58.2 195 34.4
CSS0048798 Camellia sinensis var. sinensis HOM05D006794 ORTHO05D008322 1.1e-06 57.8 194 34.5
FAN04G0930 Fragaria x ananassa HOM05D006794 ORTHO05D008322 1.1e-06 57.8 192 37.0
MD06G1228000 Malus domestica HOM05D006794 ORTHO05D008322 1.4e-06 57.4 193 35.2
PSO832G1236 Papaver somniferum HOM05D006794 ORTHO05D008322 1.8e-06 57.0 222 27.9
TWI81G0550 Tripterygium wilfordii HOM05D006794 ORTHO05D008322 1.8e-06 57.0 205 33.2
Duzib084G0148 Durio zibethinus HOM05D006794 ORTHO05D008322 2.4e-06 56.6 217 33.2
Hma1.2p1_0163F.1_g073020 Hydrangea macrophylla HOM05D006794 ORTHO05D008322 2.4e-06 56.6 183 36.1
BcaB04g18974 Brassica carinata HOM05D006794 ORTHO05D008322 3.1e-06 56.2 193 33.7
FvH4_5g17460 Fragaria vesca HOM05D006794 ORTHO05D008322 3.1e-06 56.2 190 37.4
FAN18G3906 Fragaria x ananassa HOM05D006794 ORTHO05D008322 3.1e-06 56.2 190 37.4
Atru.chr9.1672 Acer truncatum HOM05D006794 ORTHO05D008322 4.0e-06 55.8 134 39.6
FAN08G0189 Fragaria x ananassa HOM05D006794 ORTHO05D008322 4.0e-06 55.8 181 37.6
Lj4g0014763 Lotus japonicus HOM05D006794 ORTHO05D008322 4.0e-06 55.8 185 35.7
Manes.06G005000 Manihot esculenta HOM05D006794 ORTHO05D008322 4.0e-06 55.8 194 35.6
VMungo0251G1205 Vigna mungo HOM05D006794 ORTHO05D008322 4.0e-06 55.8 195 34.9
PGR083G0475 Punica granatum HOM05D006794 ORTHO05D008322 5.2e-06 55.5 199 35.7
Sabra15G0031400 Salix brachista HOM05D006794 ORTHO05D008322 5.2e-06 55.5 210 34.3
PSO210G4985 Papaver somniferum HOM05D006794 ORTHO05D008322 8.9e-06 54.7 215 29.8


User provided reference genes

Program Settings